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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5397 cluster # 5397       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5397#0 length = 856 sequences # 3  

consensusID : consensus_5397#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 856
fasta sequence
                              [TCAGGAACAGCAAAGCAAGAGGAGGAAGAAGCGGAGATGGCTGCAGGCGACGCTGCGACGCCATTGCTGGAGATGGCGTACCAATACCATGAGGGCTGCCCCGCCTGCGCCGTGGAGCGCAGCAAGGCGCTCAACCCCGGCATCCCCTACATGCGCTTCTTCCACATCTGGATCATCATCCTCGTCTCAT----GTTTGCCAATATCATCGTTATTTCCCTTCTTATACTTCATGATAAGAGACTTGCATGTTGCAAAAAGAGTAGAGGACATTGGATTCTATGCAGGTTTTGTAGGTGCGTCATATATGTTTGGTAGAGCTTTAACTTCCACTGCTTGGGGGATGGTAGCAGATCGTATTGGGAGGAAGCCTGTTATCATTTTTGGAATTTTTTCAGCCTAAGTACTTTTTAGTTCAGTTCCGATTGAACCAAGTAAGTAATGATTTGTATTACCTTCTTTATATCCACCTATGATTACTTTACCTTGTGTTGTGAAATCAGATTTGTATTCAATACTCTCTTTGGACTAAGTACACACTATTGGATGGCGATAACTACACGATTTCTTTTAGGTTCATTGAATGGCTTACTTGGACCAATAAGAGTACGGTGATTAAATTATCTAAATTCATATTTTCTATCCACTATTGAAATACTATAACTAGCTAGCATACTGCAACCGGGCTTTACAGGCTTATGCCGTTGAAGTTTGTTGACCAGAGCATCAATCCATTGGGTTGTCATTGGTATACTACAAAGTTCTATAATATTTTTTACTATAGTTATATTGCACTTTAGATTATGACACTCTTTTTATATGATTANGTTAGCACATCATGGGGCATAGGTCTCATTGTT]

[+] EMBL CK085287             [TCAGGAACAGCAAAGCAAGAGGAGGAAGAAGCGGAGATGGCTGCAGGCGACGCTGCGACGCCATTGCTGGAGATGGCGTACCAATACCATGAGGGCTGCCCCGCCTGCGCCGTGGAGCGCAGCAAGGCGCTCAACCCCGGCATCCCCTACATGCGCTTCTTCCACATCTGGATCATCATCCTCGTCTCAT    GTTTGCCAATATCATCGTTATTTCCCTTCTTATACTTCATGATAAGAGACTTGCATGTTGCAAAAAGAGTAGAGGACATTGGATTCTATGCAGGTTTTGTAGGTGCGTCATATATGTTTGGTAGAGCTTTAACTTCCACTGCTTGGGGGATGGTAGCAGATCGTATTGGGAGGAAGCCTGTTATCATTTTTGGAATTTTTTCAGCCTAAGTACTTTTTAGTTCAGTTCCGATTGAACCAAGTAAGTAATGATTTGTATTACCTTCTTTATATCCACCTATGATTACTTTACCTTGTGTTGT                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB682177             [                                                             CATTGCTGGAGATGGCGTACCAATACCATGAGGGCTGCCCCGCCTGCGCCGTGGAGCGCAGCAAGGCGCTCAACCCCGGCATCCCCTACATGCGCTTCTTCCACATCTGGATCATCATCCTCGTCTCAT    GTTTGCCAATATCATCGTTATTTCCCTTCTTATACTTCATGATAAGAGACTTGCATGTTGCAAAAAGAGTAGAGGACATTGGATTCTATGCAGGTTTTGTAGGTGCGTCATATATGTTTGGTAGAGCTTTAACTTCCACTGCTTGGGGGATGGTAGCAGATCGTATTGGGAGGAAGCCTGTTATCATTTTTGGAATTTTTTCAGCCTAAGTACTTTTTAGTTCAGTTCCGATTGAACCAAGTAAGTAATGATTTGTATTACCTTCTTTATATCCACCTATGATTACTTTACCTTGTGTTGTGAAATCAGATTTGTATTCAATACTCTCTTTGGACTAAGTACACACTATTGGATGGCGATAACTACACGATTTCTTTTAGGTTCATTGAATGGCTTACTTGGACCAATAAGAGTACGGTGATTAAATTATCTAAATTCATATTTTCTATCCACTATTGAAATACTATAACTAGCTAGCATACTGCAACCGGGCTTTACAGGCTTATGCCGTTGAAGTTTGTTGACCAGAGCATCAATCCATTGGGTTGTCATTGGTATACTACAAAGTTCTATAATATTTTTTACTATAGTTATATTGCACTTTAGATTATGACACTCTTTTTATATGATTANGTTAGCACATCATGGGGCATAGGTCTCATTGTT]
[+] EMBL CF196674             [                                                                                                                                                           CTTCTTCCACATCTGGATCATCATCCTCGTCTCATGTACGTTTGCCAATATCATCGTTATTTCCCTTCTTATACTTCATGATAAGAGACTTGCATGTTGCAAAAAGAGTAGAGGACATTGGATTCTATGCAGGTTTTGTAGGTGCGTCATATATGTTTGGTAGAGCTTTAACTTCCACTGCTTGGGGGATGGTAGCAGATCGTATTGGGAGGAAGCCTGTTATCATTTTTGGAATTTTTTCAGCTNANGTACCTTTTAGTTCAGTTCCGATTGAACCAAGTTAGTAATTACTTGTATTACCTTATTTATATCC                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_5397#0 TCAGGAACAGCAAAGCAAGAGGAGGAAGAAGCGGAGATGGCTGCAGGCGACGCTGCGACG CCATTGCTGGAGATGGCGTACCAATACCATGAGGGCTGCCCCGCCTGCGCCGTGGAGCGC AGCAAGGCGCTCAACCCCGGCATCCCCTACATGCGCTTCTTCCACATCTGGATCATCATC CTCGTCTCATGTTTGCCAATATCATCGTTATTTCCCTTCTTATACTTCATGATAAGAGAC TTGCATGTTGCAAAAAGAGTAGAGGACATTGGATTCTATGCAGGTTTTGTAGGTGCGTCA TATATGTTTGGTAGAGCTTTAACTTCCACTGCTTGGGGGATGGTAGCAGATCGTATTGGG AGGAAGCCTGTTATCATTTTTGGAATTTTTTCAGCCTAAGTACTTTTTAGTTCAGTTCCG ATTGAACCAAGTAAGTAATGATTTGTATTACCTTCTTTATATCCACCTATGATTACTTTA CCTTGTGTTGTGAAATCAGATTTGTATTCAATACTCTCTTTGGACTAAGTACACACTATT GGATGGCGATAACTACACGATTTCTTTTAGGTTCATTGAATGGCTTACTTGGACCAATAA GAGTACGGTGATTAAATTATCTAAATTCATATTTTCTATCCACTATTGAAATACTATAAC TAGCTAGCATACTGCAACCGGGCTTTACAGGCTTATGCCGTTGAAGTTTGTTGACCAGAG CATCAATCCATTGGGTTGTCATTGGTATACTACAAAGTTCTATAATATTTTTTACTATAG TTATATTGCACTTTAGATTATGACACTCTTTTTATATGATTANGTTAGCACATCATGGGG CATAGGTCTCATTGTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)