cluster # 5421

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Oryza sativa
cluster # 5421 cluster # 5421 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5421#0 length = 1020 sequences # 3
consensusID : consensus_5421#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1020
fasta sequence
                              [CCGACGCGATCCTCGAGACGATCAAGCCGCGGCGGAGCGCGGAGCGGGAGAACCTCCCCGTGACGAACGCCACCGGCAAGGGCAGAGGCGGCGACCACCTCATCGGGCTGCGGCGGCGGATGTCGTCGTTCTCGGTGCGCATCCAGCCGCTGATGTCGTCGGCGGGGGCCGGGGGCGCGTTCAGGCGGGCGACGTCGATGCCGTCGGTGAAGGCGCTGGCGGCGCAGGCGGGCGCGGTGCGGCGGTGGTGGGGGTGGGGTCTCGGGTGGGTGATGAACCGGAGGCCGGCGTTCGCGCGCGACCTCGAGATGAACGACGACGAGGCCGCCGCCCTCGGCTGCCACTGCCGCGGCACGTGGCGCCACGTCTTCTACAGGCTCCGCGCCGGCGCGCGCCGCCTCCTCGGCCGCGACGGCCTCCCGCTCTCCGCCCACGACTTCCGCTACGACTCCGTCAGCTACGCCCACAACTTCGACAATGGCGACGCCGCCGCCGCCGCCAGGCCGGAGCCCTGATCCGATCTCGCCGGCGAAAAACCGAAGCTAACGTACAGCTCCCTCAATAAGCAGCCGATCTGGTGATGGTGGTCAGGTATATATATACATATATATAGTACATATATATTTGTGTGTGATGAACTGATGATGAACATGTCGCAAATGGCCAAGCAAATCAAGATCGGATCATGAACTTAAAGCTGTAGTGTATATCATTAATTCCTCCATTTTTGCGTTCTTGCCGCTGCTGTCTCTTTCTCTT--TCTCTTTGATTCTTGGAAATGTAAATGTCTTGTAATCAGACGAACGAACAGATGATCATCAGTGGAGAATTAAGAAAGGGTTTCTTGTCATCAGATTCAGATTGTTTCAGAAAACAAAAACAAAAAGATTCAGATCTGTCTCTGCTTCTGTTTCCGGGTCTCTTTCCTCTCCAGCTGTGTGACCATGGCAGCTACAGCTGAGCTACTACTGCTACTGCTCACTGTCATCCTGCCCCCAAATTCTTCTTCTCATCTCATCTT]

[+] EMBL AK069673             [CCGACGCGATCCTCGAGACGATCAAGCCGCGGCGGAGCGCGGAGCGGGAGAACCTCCCCGTGACGAACGCCACCGGCAAGGGCAGAGGCGGCGACCACCTCATCGGGCTGCGGCGGCGGATGTCGTCGTTCTCGGTGCGCATCCAGCCGCTGATGTCGTCGGCGGGGGCCGGGGGCGCGTTCAGGCGGGCGACGTCGATGCCGTCGGTGAAGGCGCTGGCGGCGCAGGCGGGCGCGGTGCGGCGGTGGTGGGGGTGGGGTCTCGGGTGGGTGATGAACCGGAGGCCGGCGTTCGCGCGCGACCTCGAGATGAACGACGACGAGGCCGCCGCCCTCGGCTGCCACTGCCGCGGCACGTGGCGCCACGTCTTCTACAGGCTCCGCGCCGGCGCGCGCCGCCTCCTCGGCCGCGACGGCCTCCCGCTCTCCGCCCACGACTTCCGCTACGACTCCGTCAGCTACGCCCACAACTTCGACAATGGCGACGCCGCCGCCGCCGCCAGGCCGGAGCCCTGATCCGATCTCGCCGGCGAAAAACCGAAGCTAACGTACAGCTCCCTCAATAAGCAGCCGATCTGGTGATGGTGGTCAGGTATATATATACATATATATAGTACATATATATTTGTGTGTGATGAACTGATGATGAACATGTCGCAAATGGCCAAGCAAATCAAGATCGGATCATGAACTTAAAGCTGTAGTGTATATCATTAATTCCTCCATTTTTGCGTTCTTGCCGCTGCTGTCTCTTTCTCTTTCTCTCTTTGATTCTTGGAAATGTAAATGTCTTGTAATCAGACGAACGAACAGATGATCATCA                                                                                                                                                                                                        ]
[+] EMBL CB000968             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATATTTGTGTGTGATGAACTGATGATGAACATGTCGCAAATGGCCAAGCAAATCAAGATCGGATCATGAACTTAAAGCTGTAGTGTATATCATTAATTCCTCCATTTTTGCGTTCTTGCCGCTGCTGTCTCTTTCTCTT  TCTCTTTGATTCTTGGAAATGTAAATGTCTTGTAATCAGACGAACGAACAGATGATCATCAGTGGAGAATTAAGAAAGGGTTTCTTGTCATCAGATTCAGATTGTTTCAGAAAACAAAAACAAAAAGATTCAGATCTGTCTCTGCTTCTGTTTCCGGGTCTCTTTCCTCTCCAGCTGTGTGACCATGGCAGCTACAGCTGAGCTACTACTGCTACTGCTCACTGTCATCCTGCCCCCAAATTCTTCTTCTCATCTCATCTT]
[+] EMBL CB000980             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATATATGTGTGTGATGAACTGATGATGAACATGTCACAAATGGCCAAGCTAATCAAGATCGGATCATGAACTTGAAGCTGTAGTGTATATCATTAATTCCTCCATTTTTGCGCTCTTGCCGATGCTGTATCTTTATCTT  TCTCTTTGATACTTGGAAATGTAAATGTCTTGTAATCAGACGAACGAACAGA                                                                                                                                                                                                                 ]




>consensus_5421#0
CCGACGCGATCCTCGAGACGATCAAGCCGCGGCGGAGCGCGGAGCGGGAGAACCTCCCCG
TGACGAACGCCACCGGCAAGGGCAGAGGCGGCGACCACCTCATCGGGCTGCGGCGGCGGA
TGTCGTCGTTCTCGGTGCGCATCCAGCCGCTGATGTCGTCGGCGGGGGCCGGGGGCGCGT
TCAGGCGGGCGACGTCGATGCCGTCGGTGAAGGCGCTGGCGGCGCAGGCGGGCGCGGTGC
GGCGGTGGTGGGGGTGGGGTCTCGGGTGGGTGATGAACCGGAGGCCGGCGTTCGCGCGCG
ACCTCGAGATGAACGACGACGAGGCCGCCGCCCTCGGCTGCCACTGCCGCGGCACGTGGC
GCCACGTCTTCTACAGGCTCCGCGCCGGCGCGCGCCGCCTCCTCGGCCGCGACGGCCTCC
CGCTCTCCGCCCACGACTTCCGCTACGACTCCGTCAGCTACGCCCACAACTTCGACAATG
GCGACGCCGCCGCCGCCGCCAGGCCGGAGCCCTGATCCGATCTCGCCGGCGAAAAACCGA
AGCTAACGTACAGCTCCCTCAATAAGCAGCCGATCTGGTGATGGTGGTCAGGTATATATA
TACATATATATAGTACATATATATTTGTGTGTGATGAACTGATGATGAACATGTCGCAAA
TGGCCAAGCAAATCAAGATCGGATCATGAACTTAAAGCTGTAGTGTATATCATTAATTCC
TCCATTTTTGCGTTCTTGCCGCTGCTGTCTCTTTCTCTTTCTCTTTGATTCTTGGAAATG
TAAATGTCTTGTAATCAGACGAACGAACAGATGATCATCAGTGGAGAATTAAGAAAGGGT
TTCTTGTCATCAGATTCAGATTGTTTCAGAAAACAAAAACAAAAAGATTCAGATCTGTCT
CTGCTTCTGTTTCCGGGTCTCTTTCCTCTCCAGCTGTGTGACCATGGCAGCTACAGCTGA
GCTACTACTGCTACTGCTCACTGTCATCCTGCCCCCAAATTCTTCTTCTCATCTCATCTT
clustalw multiple alignements is not computed in this case