cluster # 5442

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Oryza sativa
cluster # 5442 cluster # 5442 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5442#0 length = 479 sequences # 3

consensusID : consensus_5442#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 479
fasta sequence

                              [AGAGAACGTTTTTTTGGAATTTAGATCTACAGGATGTGGGAAGCTAATTTAAAGTTGCCCATCAAAGTTGGATTTCAAACCTTGCCAGCATTCGTAGTAGTTGGTATTGATGGTGCTGTTGACACTGAAAGGAGTAAGCTTGAACAAATAAGTACTCTCAAACATAAACGACATGGTTCCACTAAGTTTGTAAGGGTTAATTTCACAGGTACTTTCTCGTTCGAATGTAGCGGTATCAGGTCCATGTGGAGTCATGCAGCTGTGCAATGAAGCTCCTCCCTCTCGGAAGCCTTCTTTCTTGGCTTCATACACTCCCTTAATCAGGCCCATGAACTCACTCATGCAATTCTTGTGATAATAAGGAGGTCGGAAAGATCGTTCTTGAGCAATCCATCGCTCAGGGAAGATCACGAAATCAGCTACAGCCACACCAGGAGATCCACTAGGACAAGTCAGCACTGTGAAAATACCCTCGTTCC]

[+] EMBL CB966343             [AGAGAACGTATATTTGGAATTTAGATCTACAGGATGTGGGAAGCTAATTTAAAGTTGCCCATCAAAGTTGGATTTCAAACCTTGCCAGCATTCGTAGTAGTTGGTATTGATGGTGCTGTTGACACTGAAAGGAGTAAGCTTGAACAAATAAGTACTCTCAAACATAAACGACATGGTTCCACTAAGTTTGTAAGGGTTAATTTCACAGGTACTTTCTCGTTCGAATGTAGCGGTATCAGGTCCATGTGGAGTCATGCAGCTGTGCAATGAAGCTCCTCCCTCTCGGAAGCCTTCTTTCTTGGCTTCATACACTCCCTTAATCAGGCCCATGAACTCACTCATGCAATTCTTGTGATAATAAGGAGGTCGGAAAGATCGTTCTTGAGCAATCCATCGCTCAGGGAAGATCACGAAATCAGCTACAGCCACACCAGGAGATCCACTAGGACAAGTCAGCACTGTGAAAATAC         ]
[+] EMBL BI305879             [ GAAAACGTTTTTTTGGAATTTAAATCTACAGGATGTGGGAAGCTAATTTAAAGTTGCCCATCAAAGTTGGATTTCAAACCTTGCCAGCATTCGTAGTAGTTGGTATTGATGGGGCTGTTGACACTGAAAGGAGTAAGCTTGAACAAATAAGTACTCTCAAACATAAACGACATGGTTCCACTAAGTTTGTAAGGGTTAATTTCACAGGGACTTTCTCGTTCGAATGTAGCGGTATCAGGTCCATGTGGAGTCATGCAGCTGTGCAATGAAACTCCTCCCTCTCGGAAGCCTTCTTTCTTGGCTTCATACACTCCCTTAATCAGGCCCATGAACTCACTCATGCAATTCTTGGGATAATAAGGAGGGCGGAAAGATCGTTCTTGAGCAATCCATCGCTCAGGGAAGATCACGAAATCAGCTACAGCCACACCAGGAGATCCACTAGGACAAGTCAGCACTGTGAAAATACCCTCGTTCC]
[+] EMBL CB964900             [ GAGAACG TATATTGGAATTTAGATCTACAGGATGTGGGAAGCTAATTTAAAGTTGCCCATCAAAGTTGGATTTCAAACCTTGCCAGCATTCGTAGTAGTTGGTATTGATGGTGCTGTTGACACTGAAAGGAGTAAGCTTGAACAAATAAGTACTCTCAAACATAAACGACATGGTTCCACTAAGTTTGTAAGGCTTAATTTCACAGGTACTTTCTCGTTCGAATGTAGCGGTATCAGGTCCATGTGGAGTCATGCAGCTGTGCAATGAAGCTCCTCCCTCTCGGAAGCCTTCTTTCTTGGCTTCATACACTCCCTTAATCAGGCCCATGAACTCACTCATGCAATTCTTGTGATAATAAGGAGGTCGGAAAGATCGTTCTTGAGCAATCCATCGCTCAGGGAAGATCACGAAATCAGCTACAGCCACACCAGGAGATCCACTAGGACAAGTCAGCACTGTGAAAATAC         ]




>consensus_5442#0
AGAGAACGTTTTTTTGGAATTTAGATCTACAGGATGTGGGAAGCTAATTTAAAGTTGCCC
ATCAAAGTTGGATTTCAAACCTTGCCAGCATTCGTAGTAGTTGGTATTGATGGTGCTGTT
GACACTGAAAGGAGTAAGCTTGAACAAATAAGTACTCTCAAACATAAACGACATGGTTCC
ACTAAGTTTGTAAGGGTTAATTTCACAGGTACTTTCTCGTTCGAATGTAGCGGTATCAGG
TCCATGTGGAGTCATGCAGCTGTGCAATGAAGCTCCTCCCTCTCGGAAGCCTTCTTTCTT
GGCTTCATACACTCCCTTAATCAGGCCCATGAACTCACTCATGCAATTCTTGTGATAATA
AGGAGGTCGGAAAGATCGTTCTTGAGCAATCCATCGCTCAGGGAAGATCACGAAATCAGC
TACAGCCACACCAGGAGATCCACTAGGACAAGTCAGCACTGTGAAAATACCCTCGTTCC

clustalw multiple alignements is not computed in this case