These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5498#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3214 fasta sequence [CTCCGACGCGGAGAGGGCGCGCGACCGCGACGCGGCCGTGGACCGGTGGGTGCGGGAGCTCAGGGACGCCATGTACGACGCCGACGACATCCTCGACGAGTGCCAGGCCGCCGCGGGGGGCGAGGCCGCGACGCCCGTTGCCATGGCGGGCTGCTGCTGCTGCTTCCGCGGCGTCCGCGTCCCTGCCCTCTCCTGCTTCCGCGACCCCGTCCGGGCACGCGAGATCGGGAAGAGGGTCAGGGCGCTCAACCGGAGGCTGGACGGCATCGAGAGGAGGAGCTCCCGCTTCGGCTTCGTCTCCCAGACTAGGATCATCTCCTCGTCTCCCTCCCCTTGCTGCTCTCGGCGCCAGATTCAGGCGACGGCCGCCGCACCGCGCTAGGCCTCATCCGATCCGACGTCGTCGGGGAGAAGATCGCGGAAGACACGAGGATGCTCGCCGACATCCTTGTCAGTAAGACGACGGACCTGGACGACGCCGGCGGCGGCTGCAATCTCATCCCCACCATTGCCGTCACCGGCGCCGGCGGCATAGGCAAGACCACCCTCGCCAGGATGGTCTTCGGCGACGCCACGGTCCAAGAGAGCTTCGACGCCAGGATCTGGCTGTTCGTCGGCCGGGACGCCGACGAGGTCACGATGCTGCGCAGCGCCATCGCCCATGCCGCCGGGGCGGCCAGCTGCGAGGGCCTCGCCGTCGCCGGGGACAAGGACCTGCTGGAGCGCGCCCTGCAGCGCGCGGTGACGCACAGGAAGGTCCTGCTGGTGATGGATGACGTGTGGAGCGACGCGGCGTGGAACGAGCTGCTCAGGGTCCCGCTTAGCCATGGCGCCCCGGGGAGCCGGATCCTGGTGACCACGAGAAACGATGGCGTTGCTCACAGGATGAAGGTGAGGTACCTCCACCGTGTTGACAAGCTGCGGCGACAGGATGCTTGGTCCTTGCTCAAGAAGCAGATAGTTTTGAACAAGAGTGATGAAGCTGAATTGGATGAGTTGGAGGATATTGGGATGCAAATTGTGGACAGGTGTGATGGTTTACCGCTCGCGATTAAGATGATTGGGGGCCTCTTACTTAGTAAGAGCAGAACAAGAGGTGCCTGGATGGAGGTTTCTAGACATTCTGCATGGTGTAAACATGAAGTGAATGATGAAATTAACAAAGTGGTCTGCTTGAGCTATGGAGAGTTGCCTTCTCATTTGAAGCAATGCTTTGTGTACTGCTCACTTTTCCCACGAGGTGAGGTGATCGAATCAAGAACCATTGTCCGAATGTGGATCGCTGAAGGGTTCGTGCAAGATAGCACGGGTTCAGGATTGCCAGAGGCTGTAGCAGCTCAGTACTACAAAGAGTTAGTCTTAAGGAACCTTTTGGACCCAAGTGATGGGTACTATGATCAACTAGGATGCACCGTGCATGATGTTGTCCGGTCTTTTGCCCAACATGTAGCGAAGGACGAGGGATTGTCCATTAACGAGATGCAGAAACAGACCATAGGTGATGCACTTGGTACTCTGAAGTTTCGTCGGCTCTGTATTTCAAACAAGCAAGTCGAGTGGGATGCTTTACAGAGGCAAGTATCACTAAGGACGTTGATACTATTCAGGAGCATCGTTACTAAGCACAAGAATTTCTTGAATAATCTTTCTTGCCTTCGGGTGCTACATCTTGAGGATGCAAATCTGATAGTACTACCAGACTCCATCTGTCACCTTAAGCATTTGAGATACCTAGGTCTCAAAGGCACATACATATCTGCACTCCCTAACCTCATAGGGAATTTGAGGTTTCTACAGCACATTGATCTCTGTGGTTGCATAAATGTGTCTGAACTTCCTGAAAGCATTGTTCGACTGCGGAAGCTAAGATCACTGGACATCAGACACACAATGGTATCTTCAGTTCCTAGGGGTTTCGGAAAGCTAGAAAATTTGGTTGAGATGTTGGGGTTCCCAACCGATTTGGATGACAGTACACATGATTGGTGTAGCTTGGAAGAGCTAGGATCTTTGCCAAATCTCAGTGCACTACATTTGGAGGTTCTGGAAAAGGCAACACTTGGCCAAATGGCAGCAAGATCAAAGCTCAGCAGCAAGCAGAATCTCACACAACTGGAGCTGAGATGCACTAGCAGGATCAGCGCAAACGGCACCGTGCAAGGTGGTATCAGCGAGGAGGATTGCGAGAGAATCGAGAACGTTTTTGAGCATCTCCGCCCTCCACCTTCAATTGACCGTCTTACGATTGCAGGTTACTTTGGACATCGGCTACCGCAGTGGATGGCCACGGCGACCGCCTTTCGGAGCTTGAGGCGGCTGGTGCTAGAAGACTACGCG-TGCTGCGACCGGCTGCCCGGTGGCTTGGGCCAACTCCCTTACCTTGACTACCTCTGGATTGAGCATGCACCATCCATTGAGCATGTCAGTCATGATTTCATCCTCCCTCCGGTAGGCATTGCTGTCGATGGCAACGCACCATCGACGACGACAACAACAACTAAGACTGAAGGTGCAGGCATTGCGTTTCCCAAGCTGAAGCGGCTGGGTTTCCAGGGGATGTTGAGATGGGCATCGTGGGACTGGGACGAGCATGTCCAAGCAATGCCTGCTCTGGAGTCGCTCACAGTGGAGAACAGCAAACTGAATCGTCTCCCTCCGGGGCTTGTGTACCACACCAGAGCACTGAAAGCTTTGGTGCTGACGAACGCCGTGAGCCTTGAATCCGTAGAGAACTTGCATTCGCTGGTTGAACTTTACCTGGCTGACAACCCAAAGCTAGAGATGGTTGTAAACTGCTCGAGCTTGACGAAGATTGAGATCCTCAGATGCCCAGAGCTGAAGGCGTTTGACAGGTTGCCTGCAGTCCGGAGCATCGTTTGGGAGGACTTGGATGCTGACACGCTCCCGGGGTACTTACAGGAGGCAAAGGTAAAGAGGTTACACATAAACTGCAACTTGAGCTTGCTCAACCTGATATCCTTGCAGGATGCCAGCTCTGAAGAGTGGAGGAGCGTCCGGCATGTGCAACAATTGAAGGTTTTCGGGTTCAAACCACAGAGCGAAACGTCTGAATGTTACTTCCTTTATACCAAAGAGCCATATCACGTCGAAACAAACATCTCCAAAGCCTGAACTTCTGCTAGATGTATTTGTCATTTGTCTTGAAAAAG-AATGTTGTATTACTATCTGTTTCCTCTACTTTGTTATTCTCATT] [+] EMBL AK101113 [CTCCGACGCGGAGAGGGCGCGCGACCGCGACGCGGCCGTGGACCGGTGGGTGCGGGAGCTCAGGGACGCCATGTACGACGCCGACGACATCCTCGACGAGTGCCAGGCCGCCGCGGGGGGCGAGGCCGCGACGCCCGTTGCCATGGCGGGCTGCTGCTGCTGCTTCCGCGGCGTCCGCGTCCCTGCCCTCTCCTGCTTCCGCGACCCCGTCCGGGCACGCGAGATCGGGAAGAGGGTCAGGGCGCTCAACCGGAGGCTGGACGGCATCGAGAGGAGGAGCTCCCGCTTCGGCTTCGTCTCCCAGACTAGGATCATCTCCTCGTCTCCCTCCCCTTGCTGCTCTCGGCGCCAGATTCAGGCGACGGCCGCCGCACCGCGCTAGGCCTCATCCGATCCGACGTCGTCGGGGAGAAGATCGCGGAAGACACGAGGATGCTCGCCGACATCCTTGTCAGTAAGACGACGGACCTGGACGACGCCGGCGGCGGCTGCAATCTCATCCCCACCATTGCCGTCACCGGCGCCGGCGGCATAGGCAAGACCACCCTCGCCAGGATGGTCTTCGGCGACGCCACGGTCCAAGAGAGCTTCGACGCCAGGATCTGGCTGTTCGTCGGCCGGGACGCCGACGAGGTCACGATGCTGCGCAGCGCCATCGCCCATGCCGCCGGGGCGGCCAGCTGCGAGGGCCTCGCCGTCGCCGGGGACAAGGACCTGCTGGAGCGCGCCCTGCAGCGCGCGGTGACGCACAGGAAGGTCCTGCTGGTGATGGATGACGTGTGGAGCGACGCGGCGTGGAACGAGCTGCTCAGGGTCCCGCTTAGCCATGGCGCCCCGGGGAGCCGGATCCTGGTGACCACGAGAAACGATGGCGTTGCTCACAGGATGAAGGTGAGGTACCTCCACCGTGTTGACAAGCTGCGGCGACAGGATGCTTGGTCCTTGCTCAAGAAGCAGATAGTTTTGAACAAGAGTGATGAAGCTGAATTGGATGAGTTGGAGGATATTGGGATGCAAATTGTGGACAGGTGTGATGGTTTACCGCTCGCGATTAAGATGATTGGGGGCCTCTTACTTAGTAAGAGCAGAACAAGAGGTGCCTGGATGGAGGTTTCTAGACATTCTGCATGGTGTAAACATGAAGTGAATGATGAAATTAACAAAGTGGTCTGCTTGAGCTATGGAGAGTTGCCTTCTCATTTGAAGCAATGCTTTGTGTACTGCTCACTTTTCCCACGAGGTGAGGTGATCGAATCAAGAACCATTGTCCGAATGTGGATCGCTGAAGGGTTCGTGCAAGATAGCACGGGTTCAGGATTGCCAGAGGCTGTAGCAGCTCAGTACTACAAAGAGTTAGTCTTAAGGAACCTTTTGGACCCAAGTGATGGGTACTATGATCAACTAGGATGCACCGTGCATGATGTTGTCCGGTCTTTTGCCCAACATGTAGCGAAGGACGAGGGATTGTCCATTAACGAGATGCAGAAACAGACCATAGGTGATGCACTTGGTACTCTGAAGTTTCGTCGGCTCTGTATTTCAAACAAGCAAGTCGAGTGGGATGCTTTACAGAGGCAAGTATCACTAAGGACGTTGATACTATTCAGGAGCATCGTTACTAAGCACAAGAATTTCTTGAATAATCTTTCTTGCCTTCGGGTGCTACATCTTGAGGATGCAAATCTGATAGTACTACCAGACTCCATCTGTCACCTTAAGCATTTGAGATACCTAGGTCTCAAAGGCACATACATATCTGCACTCCCTAACCTCATAGGGAATTTGAGGTTTCTACAGCACATTGATCTCTGTGGTTGCATAAATGTGTCTGAACTTCCTGAAAGCATTGTTCGACTGCGGAAGCTAAGATCACTGGACATCAGACACACAATGGTATCTTCAGTTCCTAGGGGTTTCGGAAAGCTAGAAAATTTGGTTGAGATGTTGGGGTTCCCAACCGATTTGGATGACAGTACACATGATTGGTGTAGCTTGGAAGAGCTAGGATCTTTGCCAAATCTCAGTGCACTACATTTGGAGGTTCTGGAAAAGGCAACACTTGGCCAAATGGCAGCAAGATCAAAGCTCAGCAGCAAGCAGAATCTCACACAACTGGAGCTGAGATGCACTAGCAGGATCAGCGCAAACGGCACCGTGCAAGGTGGTATCAGCGAGGAGGATTGCGAGAGAATCGAGAACGTTTTTGAGCATCTCCGCCCTCCACCTTCAATTGACCGTCTTACGATTGCAGGTTACTTTGGACATCGGCTACCGCAGTGGATGGCCACGGCGACCGCCTTTCGGAGCTTGAGGCGGCTGGTGCTAGAAGACTACGCG TGCTGCGACCGGCTGCCCGGTGGCTTGGGCCAACTCCCTTACCTTGACTACCTCTGGATTGAGCATGCACCATCCATTGAGCATGTCAGTCATGATTTCATCCTCCCTCCGGTAGGCATTGCTGTCGATGGCAACGCACCATCGACGACGACAACAACAACTAAGACTGAAGGTGCAGGCATTGCGTTTCCCAAGCTGAAGCGGCTGGGTTTCCAGGGGATGTTGAGATGGGCATCGTGGGACTGGGACGAGCATGTCCAAGCAATGCCTGCTCTGGAGTCGCTCACAGTGGAGAACAGCAAACTGAATCGTCTCCCTCCGGGGCTTGTGTACCACACCAGAGCACTGAAAGCTTTGGTGCTGACGAACGCCGTGAGCCTTGAATCCGTAGAGAACTTGCATTCGCTGGTTGAACTTTACCTGGCTGACAACCCAAAGCTAGAGATGGTTGTAAACTGCTCGAGCTTGACGAAGATTGAGATCCTCAGATGCCCAGAGCTGAAGGCGTTTGACAGGTTGCCTGCAGTCCGGAGCATCGTTTGGGAGGACTTGGATGCTGACACGCTCCCGGGGTACTTACAGGAGGCAAAGGTAAAGAGGTTACACATAAACTGCAACTTGAGCTTGCTCAACCTGATATCCTTGCAGGATGCCAGCTCTGAAGAGTGGAGGAGCGTCCGGCATGTGCAACAATTGAAGGTTTTCGGGTTCAAACCACAGAGCGAAACGTCTGAATGTTACTTCCTTTATACCAAAGAGCCATATCACGTCGAAACAAACATCTCCAAAGCCTGAACTTCTGCTAGATGTATTTGTCATTTGTCTTGAAAAAG AATGTTGTATTACTATCTGTTTCCTCTACTTTGTTATTCTCATT] [+] EMBL CB618271 [ TCAGGAGCATCGTTACTAAGCACAAGAATTTCTTGAATAATCTTTCTTGCCTTCGGGTGCTACATCTTGAGGATGCAAATCTGATAGTACTACCAGACTCCATCTGTCACCTTAAGCATTTGAGATACCTAGGTCTCAAAGGCACATACATATCTGCACTCCCTAACCTCATAGGGAATTTGAGGTTTCTACAGCACATTGATCTCTGTGGTTGCATAAATGTGTCTGAACTTCCTGAAAGCATTGTTCGACTGCGGAAGCTAAGATCACTGGACATCAGACACACAATGGTATCTTCAGTTCCTAGGGGTTTCGGAAAGCTAGAAAATTTGGTTGAGATGTTGGGGTTCCCAACCGATTTGGATGACAGTACACATGATTGGTGTAGCTTGGAAGAGCTAGGATCTTTGCCAAATCTCAGTGCACTACATTTGGAGGTTCTGGAAAAGGCAACACTTGGCCAAATGGCAGCAAGATCAAAGCTCAGCAGCAAGCAGAATCTCACACAACTGGAGCTGAGATGCACTAGCAGGATCAGCGCAAACGGCACCGTGCAAGGTGGTATCAGCGAGGAGGATTGCGAGAGAATCGAGAACGTTTTTGAGCATCTCCGCCCTCCACCTTCAATTGACCGTCTTACGATTGCAGGTTACTTTGGACATCGGCTACCGCAGTGGATGGCCACGGCGACCGCCTTTCGGAGCTTGAGGCGGCTGGTGCTAGAAGACTACGCGTTGCTGCGACCGGCTGCCCGGTGGCTTGNGCCAACTCCCTTACCTTGACTACCTCTGGATTGAGCATGCACCATCCATTGAGCATGTCAGTCATGATTTCATCCTCCCTCCGGTAGGCATTGCTG ] [-] EMBL CB618272 [ CACCATCCATTGAGCATGTCAGTCATGATTTCATCCTCCCTCCGGTAGGCATTGCTGTCGATGGCAACGCACCATCGACGACGACAACAACAACTAAGACTGAAGGTGCAGGCATTGCGTTTCCCAAGCTGAAGCGGCTGGGTTTCCAGGGGATGTTGAGATGGGCATCGTGGGACTGGGACGAGCATGTCCAAGCAATGCCTGCTCTGGAGTCGCTCACAGTGGAGAACTGCAAACTGAATCGTCTCCCTCCGGGGCTTGTGTACCACACCAGAGCACTGAAAGCTTTGGTGCTGACGAACGCCGTGAGCCTTGAATCCGTAGAGAACTTGCATTCGCTGGTTGAACTTTACCTGGCTGACAACCCAAAGCTAGAGATGGTTGTAAACTGCTCGAGCTTGACGAAGATTGAGATCCTCAGATGCCCAGAGCTGAAGGCGTTTGACAGGTTGCCTGCAGTCCGGAGCATCGTTTGGGAGGACTTGGATGCTGACACGCTCCCGGGGTACTTACAGGAGGCAAAGGTAAAGAGGTTACACATAAACTGCAACTTGAGCTTGCTCAACCTGATATCCTTGCAGGATGCCAGCTCTGAAGAGTGGAGGAGCGTCCGGCATATGCAACAATTGAAGGTTTTCGGGTTCAAACCACAGAGCGAAACGTCTGAATGTTACTTCCTTTATACCAAAGAGCCATATCACGTCGAAACAAACATCTCCAAAGCCTGAACTTCTGCTAGATGTATTTGTCATTTGTCTTGAAAAAGNAATGTTGTATTACT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||