These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5590#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 982 fasta sequence [CAATGCGAATTTCTCCATCTCCTCAGCCTCAGGCTCAGGCTGCACTGAAGGCAGAGACGCGATGGCCAAGCTCCACCAGTGGCCAGTACTCCTCCTCGCCGCCGTCATCGTCCTCGCCGCCTCGTTCGCGGTGCCGGCCTCTGCGGCGCGGCGGCGGGCGGTGCGGCTGCACTTGTACATGCACGACATCGCCGGGGAGACGGCCGTGCAGGTGGTGAAGGGCACGGGGCCTCTGCATCCGTCAATGCCGCCGGGAAACAGGCACTTCGGCGACACGACGGTGATGGACGACCTCCTCACCGAGGGCCCCAGCCTCGACTCCAACCCCGTCGGCCGCGCCCAGGGCTCCTACGTCCTCGCCGGCCT-CGTCGACCCCGTCGTCGTGGTCACCGCCACCTTCAAGCTCACCCACGGGCCCTACAACGGGAGCACCCTCGTCATCGCCGGCCGCGACGAGGTCCTTGCGGAGGTGAGGGAGCTGGCGGTGGTCGGCGGGACGGGGAAGCTCCGGCGAGCGTCCGGGCACGTGCTGTGGAGGACGCTAGAGGTGTTGGAGGGGGCGCACTATGTGCTGGAGCTGGACGTGTACGCCTCACTGCCCGCTACTGCTGCTGCTGC-TGCATCTGCTCTTGCTCTTGCTACCAATTAAACGTCACCCTCACCCCTCCTCCTCATGCTGCAGCCTGCAGTTGGGAATGGAGAGGAAGATTAATAGTATGATGACTTGAGAGAAGGACCATATATACCTCTGAATCTCTGATGATGGGAAATTAAGAGTTACAGGATCACGTCTCGTCGACTACCTATGGCGTGACTCATCGTCACATGCTCATAGTGGCTAACTGGCTATGGATACTACTACTACAATAATCCATTTGGCCACACAATTTGTCACAATGCCCTTAATCATTGTGCTTTTCAATAATTAACATA-TTTCATGTTATGAATAATACCATCCATATATAAACTGCACTACGTCTCA] [+] EMBL AK060004 [CAATGCGAATTTCTCCATCTCCTCAGCCTCAGGCTCAGGCTGCACTGAAGGCAGAGACGCGATGGCCAAGCTCCACCAGTGGCCAGTACTCCTCCTCGCCGCCGTCATCGTCCTCGCCGCCTCGTTCGCGGTGCCGGCCTCTGCGGCGCGGCGGCGGGCGGTGCGGCTGCACTTGTACATGCACGACATCGCCGGGGAGACGGCCGTGCAGGTGGTGAAGGGCACGGGGCCTCTGCATCCGTCAATGCCGCCGGGAAACAGGCACTTCGGCGACACGACGGTGATGGACGACCTCCTCACCGAGGGCCCCAGCCTCGACTCCAACCCCGTCGGCCGCGCCCAGGGCTCCTACGTCCTCGCCGGCCT CGTCGACCCCGTCGTCGTGGTCACCGCCACCTTCAAGCTCACCCACGGGCCCTACAACGGGAGCACCCTCGTCATCGCCGGCCGCGACGAGGTCCTTGCGGAGGTGAGGGAGCTGGCGGTGGTCGGCGGGACGGGGAAGCTCCGGCGAGCGTCCGGGCACGTGCTGTGGAGGACGCTAGAGGTGTTGGAGGGGGCGCACTATGTGCTGGAGCTGGACGTGTACGCCTCACTGCCCGCTACTGCTGCTGCTGC TGCATCTGCTCTTGCTCTTGCTACCAATTAAACGTCACCCTCACCCCTCCTCCTCATGCTGCAGCCTGCAGTTGGGAATGGAGAGGAAGATTAATAGTATGATGACTTGAGAGAAGGACCATATATACCTCTGAATCTCTGATGATGGGAAATTAAGAGTTACAGGATCACGTCTCGTCGACTACCTATGGCGTGACTCATCGTCACATGCTCATAGTGGCTAACTGGCTATGGATACTACTACTACAATAATCCATTTGGCCACACAATTTGTCACAATGCCCTTAATCATTGTGCTTTTCAATAATTAACATA TTTCATGTTATGAATAATACCATCCATATATAAACTGC ] [+] EMBL AK100221 [ ATGCGAATTTCTCCATCTCCTCAGCCTCAGGCTCAGGCTGCACTGAAGGCAGAGACGCGATGGCCAAGCTCCACCAGTGGCCAGTACTCCTCCTCGCCGCCGTCATCGTCCTCGCCGCCTCGTTCGCGGTGCCGGCCTCTGCGGCGCGGCGGCGGGCGGTGCGGCTGCACTTGTACATGCACGACATCGCCGGGGAGACGGCCGTGCAGGTGGTGAAGGGCACGGGGCCTCTGCATCCGTCAATGCCGCCGGGAAACAGGCACTTCGGCGACACGACGGTGATGGACGACCTCCTCACCGAGGGCCCCAGCCTCGACTCCAACCCCGTCGGCCGCGCCCAGGGCTCCTACGTCCTCGCCGGCCT CGTCGACCCCGTCGTCGTGGTCACCGCCACCTTCAAGCTCACCCACGGGCCCTACAACGGGAGCACCCTCGTCATCGCCGGCCGCGACGAGGTCCTTGCGGAGGTGAGGGAGCTGGCGGTGGTCGGCGGGACGGGGAAGCTCCGGCGAGCGTCCGGGCACGTGCTGTGGAGGACGCTAGAGGTGTTGGAGGGGGCGCACTATGTGCTGGAGCTGGACGTGTACGCCTCACTGCCCGCTACTGCTGCTGCTGC TGCATCTGCTCTTGCTCTTGCTACCAATTAAACGTCACCCTCACCCCTCCTCCTCATGCTGCAGCCTGCAGTTGGGAATGGAGAGGAAGATTAATAGTATGATGACTTGAGAGAAGGACCATATATACCTCTGAATCTCTGATGATGGGAAATTAAGAGTTACAGGATCACGTCTCGTCGACTACCTATGGCGTGACTCATCGTCACATGCTCATAGTGGCTAACTGGCTATGGATACTACTACTACAATAATCCATTTGGCCACACAATTTGTCACAATGCCCTTAATCATTGTGCTTTTCAATAATTAACATA TTTCATGTTATGAATAATACCATCCATATATAAACTGCACTACGTCTCA] [+] EMBL BI806432 [ ACGTCCTC CC GCCTGCGTCGACCCCTTCGTCGTGGTC CC CCACCTTCAAGCTCACCCAC GGCCCTAC ACGGGACCACCCTCGTCATCGCC GCCGCGACGAGGTCCTTTCGGAGGTGA GGAGCT GCGGT GTC GC GGACGGGGAAGCTCC GCGAGCGTCCGGGCACGTGCTGTGGAGGACGCTAGAGGTGTTGGAGGGGGC CACTATGTGCTGGAGCTGGACGTGTACGCCTCACTGCCCGCTACTGCTGCTGCTGCGTGCATCTGCTCTTGCTCTTGCTACC ATTAAACGTCACCCTCACCCCTCCTCCTCATGCT CAGCCTGCAGTTGGGAATGGAGAGGAAGATTAATAGTATGATGACTTGAGAGAAGGACCATATATACCTCTGAATCTCTGATGATGGGAAATTAAGAGTTACAGGATCACGTCTCGTCGACTACCTATGGCGTGACTCATCGTCACATGCTCATAGTGGCTAACTGGCTATGGATACTACTACTAC ATAATCCATTTGGCCACAC ATTTGTCAC ATGCCCTTAATCATTGTGCTTTTC ATAATTAACATACTTTCATGTaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||