cluster # 5611

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Oryza sativa
cluster # 5611 cluster # 5611 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5611#0 length = 756 sequences # 3

consensusID : consensus_5611#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 756
fasta sequence

                              [AATCCGCGCCGCTCCACCTTTCTCACTCTCTCCCTCCGTGCCGTCCTCCACCTCTGTTCCTCCCTCCCTCCACGCTGCTCCGGCACTCTCTCCATCTGCGCCGCCGTTTGCCTCTCCTCCCTCTCCGAGCCGCGCCGCGCACACCACCGTCGCGTACTGCCACGACCCTTCCTCTCCCTCTCCTTCAGTTCTCGGTGAGTCGGCGATGGTGATGGCGACGGGAGGTGGGCGGCAGCGGATCTGACGGCGGGGTCACAGGGTTGCGTGGATCCAGCGGCCCCAGGCCCCACGATGGCGACGTGGTCACGGGTGGGAGACTGGGAGAGCTTCAGCGCGGGGCATAGGGCGTGGATCGACGACAGCGTGCCCCTCCCTCCTGGATCTGGTGTCGGCGGGTCTGGGCGGTGGATCCGAT-GGGGCCCTCAGCAACAAAGCAACGGGGTCGCAGGCCACCGCTAGAAGATCTCCGGAGGTCATTGGGTCCGGCCGTGGGAGCGCCGTGGTGACTCTGCCCTCACTCCCCTCCTCTCAGATCCGGCGACGACGACCCAGCCTTCCCCTGCCCTCCCTCTCTCAGATCTGATGCCGACGAAACTGCATTTCCGTTCCCTCTCGGCGACGAGTTGTTGCTCATGTTGTTGTTCATCATGCTATATTGTGACATGTTGTTCTTGGATTGTGACATTGTATTTGTCCTCATGTTGTTCTTGGATTTGTATTGTGACAAGTTGTTCAATAACGACAGATTGGAACACA]

[+] EMBL AK108174             [AATCCGCGCCGCTCCACCTTTCTCACTCTCTCCCTCCGTGCCGTCCTCCACCTCTGTTCCTCCCTCCCTCCACGCTGCTCCGGCACTCTCTCCATCTGCGCCGCCGTTTGCCTCTCCTCCCTCTCCGAGCCGCGCCGCGCACACCACCGTCGCGTACTGCCACGACCCTTCCTCTCCCTCTCCTTCAGTTCTCGGTGAGTCGGCGATGGTGATGGCGACGGGAGGTGGGCGGCAGCGGATCTGACGGCGGGGTCACAGGGTTGCGTGGATCCAGCGGCCCCAGGCCCCACGATGGCGACGTGGTCACGGGTGGGAGACTGGGAGAGCTTCAGCGCGGGGCATAGGGCGTGGATCGACGACAGCGTGCCCCTCCCTCCTGGATCTGGTGTCGGCGGGTCTGGGCGGTGGATCCGAT GGGGCCTTCAGCAACAAAGCAACGGGGTCGCAGGCCACCGCTAGAAGATCTCCGGAGGTCATTGGGTCCGGCCGTGGGAGCGCCGTGGTGACTCTGCCCTCACTCCCCTCCTCTCAGATCCGGCGACGACGACCCAGCCTTCCCCTGCCCTCCCTCTCTCAGATCTGATGCCGACGAAACTGCATTTCCGTTCCCTCTCGGCGACGAGTTGTTGCTCATGTTGTTGTTCATCATGCTATATTGTGACATGTTGTTCTTGGATTGTGACATTGTATTTGTCCTCATGTTGTTCTTGGATTTGTATTGTGACAAGTTGTTCAATAACGACAGATTGGAACACA]
[+] EMBL C27426               [                              TCCCTCCGTGCCGTCCTCCACCTCTGTTCCTCCCTCCCTCCACGCTGCTCCGGCACTCTCTCCATCTGCGCCGCCGTTTGCCTCTCCTCCCTCTCCGAGCCGNGCCGCGCACACCACCGTCGCGNACTGCCACGACCCTTCCTCTCCCTCTCCTTCAGTTCTCGGTGAGTCGGCGATGGTGATGGCGACGGGAGGTGGGCGGCA NGGATCTGACGGCGGGGTCACAGGGTTGCGTGGATCCAGCGGCCCCAGGCCCCACGATGGCGACGTGGTCACGGGTGGGAGACTGGGAGAGCTTCAGCGCGGGGCATAGGGCGTGGATCGACGACAGCGTGCCCCTCCCTCCTGGATCTGGTGTCGGCGGGTCTGGGCGGTGGATCCGATGGGGGCCCTCAGCAACAAAGCAACGNGGTCGNAGGCCACCGCTAGAAGATCTCCGG                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU092522             [                                                                                                                                                                                                                                                                                                                                                                                                     CGGCGGGTCTGGGCGGTGGATCCGAT GGGGCCCTCAGCAACAAAGCAACGGGGTCGCAGGCCACCGCTAGAAGATCTCCGGAGGTCATTGGGTCCGGCCGTGGGAGCGCCGTGGTGACTCTGCCCTNACTCCCCTCNTCTCAGATCCGGCGACGACGACCCAGCCTTCCCCTGCCCTCCNTNTNTNAGATCTGATGCCGACGAAACTGCATTTCCGTTCCCTNTCGGCGACGAGTTGTTGCTCATGTTGTTGTTCATCATGCTATATTGTGACATGTTGTTCTTGGAaaaa                                                                            ]




>consensus_5611#0
AATCCGCGCCGCTCCACCTTTCTCACTCTCTCCCTCCGTGCCGTCCTCCACCTCTGTTCC
TCCCTCCCTCCACGCTGCTCCGGCACTCTCTCCATCTGCGCCGCCGTTTGCCTCTCCTCC
CTCTCCGAGCCGCGCCGCGCACACCACCGTCGCGTACTGCCACGACCCTTCCTCTCCCTC
TCCTTCAGTTCTCGGTGAGTCGGCGATGGTGATGGCGACGGGAGGTGGGCGGCAGCGGAT
CTGACGGCGGGGTCACAGGGTTGCGTGGATCCAGCGGCCCCAGGCCCCACGATGGCGACG
TGGTCACGGGTGGGAGACTGGGAGAGCTTCAGCGCGGGGCATAGGGCGTGGATCGACGAC
AGCGTGCCCCTCCCTCCTGGATCTGGTGTCGGCGGGTCTGGGCGGTGGATCCGATGGGGC
CCTCAGCAACAAAGCAACGGGGTCGCAGGCCACCGCTAGAAGATCTCCGGAGGTCATTGG
GTCCGGCCGTGGGAGCGCCGTGGTGACTCTGCCCTCACTCCCCTCCTCTCAGATCCGGCG
ACGACGACCCAGCCTTCCCCTGCCCTCCCTCTCTCAGATCTGATGCCGACGAAACTGCAT
TTCCGTTCCCTCTCGGCGACGAGTTGTTGCTCATGTTGTTGTTCATCATGCTATATTGTG
ACATGTTGTTCTTGGATTGTGACATTGTATTTGTCCTCATGTTGTTCTTGGATTTGTATT
GTGACAAGTTGTTCAATAACGACAGATTGGAACACA

clustalw multiple alignements is not computed in this case