cluster # 5630

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Oryza sativa
cluster # 5630 cluster # 5630 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5630#0 length = 1090 sequences # 3
consensusID : consensus_5630#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1090
fasta sequence
                              [CACATACTGCTCGCACGTTGCTCGTGCTTCGCTCGCCGCCAATGAGGCCGGGAGCCATGGCCGCCGCCGCCGCGAAGCTCCCGCGCCTCACCACCTCCGCCGCGCTCTTCCCGACCCCGAGGCCGTTCGGCTCCCCCAGGCCCGCCAAAGCCAGGCCGATGCCGCCGCCGCCGCCCATCACCATCTCCATGGACCCTGCCGCCGTCGACCCGGCCCACCTCCAGGCGCTCATGCTCGCCTGCGCACACTCCTGCGCCATCCGCCCCTCGCCGCCCTCCGCCGCGGAGGACCCCGTCGACCTCCGCAAGCTCCGCGTCGCGCTCGCGCACAGCTTCCTCGTCGTGTCCGTCTTCTGCAGCGCGAGGTTCCTGGACGATGGGGATGGGGGTGTCGATGGCGATGGCCGGCGGCGGCTGCTGGGCCTGGGGCTCGGGCTCGGGCGGCGAGAGGACCGGCGGCTCGTCGGATTTGGCCGGGCCGTCTCCGACGTCGGGCTCACCGCGTCCGTCCACGACGTCGTGTGACTAACAGGTACATCCGTCACTACAGAGGAGAGGTATAGGCCGACAAATTGTTGAGAGAATGACAAAAGTACTCCATAACAGAGGTATATTTGACATTTCCGCACTATGTACAGAAAAGGAGAGGCCCTTTTTTGAAGCATGTGGATTTGGGGACGATGCAATGGGTTCAACAACAATGATGTACACGGGAAAGATGCACAGATAGTACACAATGATAATTGTCTCAAGGAAGATATTGACAGCTCCTCTGGTGGGTTAACAGTTGCTGCTTGAATATATCACTGCCAGTAAAGGAACAGCAGCCGGAGTAAATTATGCAATCCTTTCTAGCTGGTTAGAAGAGAAAATAACCAGAAGGATATGGCAAAACTCATAGCATACTAGTATTTGTGAAGGATAGCAGTACATACCATGTTTGATACCCCAGACCAGCATCTGTATACTCTACCACTGATTGTAAAAACTTTGAGATGAGTGCTAAGATTTCATTTACAAACAAAGAATGAAGGAAGGAAACAAATACATCAAACAAGTTATTGAATCTGCAGTGGAAATAGCAATTATCC]

[+] EMBL AK067311             [CACATACTGCTCGCACGTTGCTCGTGCTTCGCTCGCCGCCAATGAGGCCGGGAGCCATGGCCGCCGCCGCCGCGAAGCTCCCGCGCCTCACCACCTCCGCCGCGCTCTTCCCGACCCCGAGGCCGTTCGGCTCCCCCAGGCCCGCCAAAGCCAGGCCGATGCCGCCGCCGCCGCCCATCACCATCTCCATGGACCCTGCCGCCGTCGACCCGGCCCACCTCCAGGCGCTCATGCTCGCCTGCGCACACTCCTGCGCCATCCGCCCCTCGCCGCCCTCCGCCGCGGAGGACCCCGTCGACCTCCGCAAGCTCCGCGTCGCGCTCGCGCACAGCTTCCTCGTCGTGTCCGTCTTCTGCAGCGCGAGGTTCCTGGACGATGGGGATGGGGGTGTCGATGGCGATGGCCGGCGGCGGCTGCTGGGCCTGGGGCTCGGGCTCGGGCGGCGAGAGGACCGGCGGCTCGTCGGATTTGGCCGGGCCGTCTCCGACGTCGGGCTCACCGCGTCCGTCCACGACGTCGTGTGACTAACAGGTACATCCGTCACTACAGAGGAGAGGTATAGGCCGACAAATTGTTGAGAGAATGACAAGAGTACTCCATAACAGAGGTATATTTGACATTTCCGCACTATGTACAGAAAAGGAGAGGCCCTTTTTTGAAGCATGTGGATTTGGGGACGATGCAATGGGTTCAACAACAATGATGTACACGGGAAAGATGCACAGATAGTACACAATGATAATTGTCTCAAGGAAGATATTGACAGCTCCTCTGGTGGGTTAACAGTTGCTGCTTGAATATATCACTGCCAGTAAAGGAACAGCAGCCGGAGTAAATTATGCAATCCTTTCTAGCTGGTTAGAAGAGAAAATAACCAGAAGGATATGGCAAAACTCATAGCATACTAGTATTTGTGAAGGATAGCAGTACATACCATGTTTGATACCCCAGACCAGCATCTGTATACTCTACCACTGATTGTAAAAACTTTGAGATGAGTGCTAAGATTTCATTTACAAACAAAGAATGAAGGAAGGAAACAAATACATCAAACAAGTTATTGAATCTGCAGTGGAAATAGCAATTATCC]
[+] EMBL CB651374             [                                                      CCATGGCCGCCGCCGCCGCGAAGCTCCCGCGCCTCACCACCTCCGCCGCGCTCTTCCCGACCCCGAGGCCGTTCGGCTCCCCCAGGCCCGCCAAAGCCAGGCCGATGCCGCCGCCGCCGCCCATCACCATCTCCATGGACCCTGCCGCCGTCGACCCGGCCCACCTCCAGGCGCTCATGCTCGCCTGCGCACACTCCTGCGCCATCCGCCCCTCGCCGCCCTCCGCCGCGGAGGACCCCGTCGACCTCCGCAAGCTCCGCGTCGCGCTCGCGCACAGCTTCCTCGTCGTGTCCGTCTTCTGCAGCGCGAGGTTCCTGGACGATGGGGATGGGGGTGTCGATGGCGATGGCCGGCGGCGGCTGCTGGGCCTGGGGCTCGGGCTCGGGCGGCGAGAGGACCGGCGGCTCGTCGGATTTGGCCGGGCCGTCTCCGACGTCGGGCTCACCGCGTCCGTCCACGACGTCGTGTGACTAACAGGTACATCCGTCACTACAGAGGAGAGGTATAGGCCGACAAATTGTTGAGAGAATGACAAAAGTACTCCATAACAGAGGTATATTTGACATTTCCGCACTATGTACAGAAAAGGAGAGGCCCTTTTTTGAAGCATGTGGATTTGGGGACGATGCAATGGGTTCAACAACAATGATGTACACGGGAAAGATGCACAGATAGCACACAATGATAATTGTCTCAAGGAAGATATTGACAGCTCCTC                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB651375             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGTTCACCGCGTCCTTCCAGGACGTGGTGTGATTAACAGGTACATCCGTCATTACAGAGGAGAGGTATAGGCCGACAAATTGTTGAGAGAATGACAAAAGTACTCCATACCAGAGGTATATTTGACATTTCCGCATTATGTACAGAAAAGGAGAGGCCCTTTTTTGAAGCATGTGGATTTGGGGAGGATGCAATGGGTTCAACAACAATGATGTCCCCGGGAAAGATGCCCAGATAGTACCCAATGATAATTTTTTCAAGGAAGATATTGACAGCTCTTTTGGGGGGTTAACAGTTGTTGCTTGAATATATCCCTCCCAGTAAAGGAACAGCAGCCGGAGTAAATTATGCAATCCTTTTTAGCTGGTTAGAAGGGAAAATACCCAGAAGGATATGGCAAAATTCATAGCATATTAGTATTTGTGAAGGATAGCAGTACATCCCATGTTTGATCCCCCAGACCAGCATCTGTATACTTTCCCACTGAGGGTAAAAACTTTGAGATGAGTGCTAAGATTTCATTTCCAACCAAAGAATGAAGGAAGGAAACAAtt                                             ]




>consensus_5630#0
CACATACTGCTCGCACGTTGCTCGTGCTTCGCTCGCCGCCAATGAGGCCGGGAGCCATGG
CCGCCGCCGCCGCGAAGCTCCCGCGCCTCACCACCTCCGCCGCGCTCTTCCCGACCCCGA
GGCCGTTCGGCTCCCCCAGGCCCGCCAAAGCCAGGCCGATGCCGCCGCCGCCGCCCATCA
CCATCTCCATGGACCCTGCCGCCGTCGACCCGGCCCACCTCCAGGCGCTCATGCTCGCCT
GCGCACACTCCTGCGCCATCCGCCCCTCGCCGCCCTCCGCCGCGGAGGACCCCGTCGACC
TCCGCAAGCTCCGCGTCGCGCTCGCGCACAGCTTCCTCGTCGTGTCCGTCTTCTGCAGCG
CGAGGTTCCTGGACGATGGGGATGGGGGTGTCGATGGCGATGGCCGGCGGCGGCTGCTGG
GCCTGGGGCTCGGGCTCGGGCGGCGAGAGGACCGGCGGCTCGTCGGATTTGGCCGGGCCG
TCTCCGACGTCGGGCTCACCGCGTCCGTCCACGACGTCGTGTGACTAACAGGTACATCCG
TCACTACAGAGGAGAGGTATAGGCCGACAAATTGTTGAGAGAATGACAAAAGTACTCCAT
AACAGAGGTATATTTGACATTTCCGCACTATGTACAGAAAAGGAGAGGCCCTTTTTTGAA
GCATGTGGATTTGGGGACGATGCAATGGGTTCAACAACAATGATGTACACGGGAAAGATG
CACAGATAGTACACAATGATAATTGTCTCAAGGAAGATATTGACAGCTCCTCTGGTGGGT
TAACAGTTGCTGCTTGAATATATCACTGCCAGTAAAGGAACAGCAGCCGGAGTAAATTAT
GCAATCCTTTCTAGCTGGTTAGAAGAGAAAATAACCAGAAGGATATGGCAAAACTCATAG
CATACTAGTATTTGTGAAGGATAGCAGTACATACCATGTTTGATACCCCAGACCAGCATC
TGTATACTCTACCACTGATTGTAAAAACTTTGAGATGAGTGCTAAGATTTCATTTACAAA
CAAAGAATGAAGGAAGGAAACAAATACATCAAACAAGTTATTGAATCTGCAGTGGAAATA
GCAATTATCC
clustalw multiple alignements is not computed in this case