cluster # 5636

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Oryza sativa
cluster # 5636 cluster # 5636 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5636#0 length = 2997 sequences # 3
consensusID : consensus_5636#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2997
fasta sequence
                              [TAGAGTCAGACGACCACCAGCAAAACCAGAGAAAAGAGGATCATGGTGTCCGCTTGGACCATCGTCCCCGGCATCATCGTTTCGCTGATCGTGCTTGTGGTCACCAAGCTGTGGGATCCAATCGCCCAGGTCTACGGGTACCCGTTCGATGCGGAAAGGCGCGTGCAGAAACTCGTCGATGAGTTCTCCAAGCTGCAAGATCAGTTGGGCGAGCTGGGGATTTTGGATCCCAAACCCTCGTCCGCAGTGCTCTCGGGTTGGCTGCAGCGGGCGGCTGGATGCAAGGACAAGGTGGAGGAGATAAAGCGCCGACATGAATCTGTGAAGAGCGTGGGGGTCCAGGGCCTCCTACCCCGGATCAACGTGGTCCGGCACCTCTGCGCCATCGGCAGGGATGCAGATCTGGAGCTAGAAGAAGTCAAGGATCTCATCGCCAAAGGAGAGGGCCACTTGAAGGAGGCGGGTGCTGCTCCCCATCCGATTCCGATTCCGATTCCTCTACTACCTCCACCGGCGGCAGAATTCGACAACGGCCAGCTTGCCCAGTCAATCCTCGACACGGCAGCGGCCGGCACATGGGGAGTTGGGATCCAGGCAATGAAACCTCACCTGACCAGCGTCCTAGATTTTGTCCGGGAAGACGGCGGCGGAGCTCCTGGCGTGCTAGGAGTATGGGGCATGGGCGGCGCCGGCAAAACCACGCTTCTCAAGCTCGCGCGCGATCCACGAGTACAAACCTTGGACCATATTGTTCTCGCTGAGGCTGGCAAGTGCTGCGATATCGCCAAGCTTCAGGACAGCATTGCACAGGGCACGAGCCTGGTGTTGCCTCCTTCGCTCAGTGTCACCAACCGTGCTACCGTCCTGTGCAACCATCTTCGCAACAAGAAATTCTTGCTGCTGCTGGATGACCTGTGGAACTACATTGATTTGGAGGCTGTCGGCATCCCGTTGCCCCTTGGACGGGGGAATCAACGTAAGGTTGTATTGACATCACGAAGCGAGGCCGTATGTGTCAGCATGGCACGCCAAGGAGTTACCATCAGAATGGGGTGCCTAGATCAACAAGATGCGTTCAAGCTCTTCGAGGATAAAGTTGGGAGTGCTACCATCAATGCTGATACTAGGATTCCAGAGCTTGCCAGGCAGGTAGCCGAAATGTGCGGTGGTCTGCCATTAGTGCTGTGCGTCATCGGTCGATCCATGTGCACGAAGAAGAATTATAAGCTGTGGGTGGATGCAGTCAACAGGTTGGAGAAGTCAAAGGTCCATAATAACCTAGTTGGAGACGATGATATATTCAACATCCTAAGGTACAGCTTCGATGGACTACATGACGACGAAGCACGGGGTTGTTTTCTGGCGTGCACCCTGTTCCCTCCATTTTACATTGAGAAGAAGCGACTCATCCGGTGGTGTATGGGGCTTGGTTTCTTGGATCCCGCCAACGGTTTTGAAGGAGGAGAGTCTGTCATCGATTCCCTGCAGGGAGCATCGCTCCTGGAGAGCGCTGGAAGCTATTCTGTTGATATGCACGACATCATCCGCGACATGGCGCTGTGGATTGTAAGGGGCCCTGGAGGTGAGAAGTGGAGCGTGCTGAATCGAGCATGGGTGCAGGATGCAACCATACGCAAAATGAACAACGGGTATTGGACTCGGGAAGAATGGCCTCCCAAGGATACATGGCCTGAGCTTGAGATGCTTGCGATGGAAAGCAATCGCTCCTACCTTGATCCGTGGAAGGTTTCGTCCATCGGCCAGATGACAAACATCAGCTTTCTGGAACTGGTGTCTTTAGATACATTTCCAATGGAGATCTGTGAGCTGCATAAGCTCGAATACCTCTGCATCAAAGCAGGGAGTATGTCTAGGCTGCCAATTGAACTCGGGAAACTGTCGAAACTCAAGCAATTGCATCTGCGGCAGTCTTGCAGTCTTGGCGAGATACCGACAGGATTGATCTCGCAGCTCGTAAACCTGCAGGTGCTGGACCTTTTCTGCAGCAGCATCGATTATCCCTACCGTCCAAAATCTGCTGCTGGTGGCCTTTACAATTTTCTGGGTGAACTGGCCGAAGCTAGAGCATCGGAGAAGTTGAAGATTCTTGGGATTTGCCTGGATGCGACGCGTGATAATAGGGCATTTCTGAAGCAGTTGATGCAGAAGCAAGTGCGAATAAGGTCGCTCTGCTTAAGCTTCATCAATCCAATCTCGCCTGGACATGATCAACCCCAGCCGGCCACCAGCAGATACATGATCGCCGAACTGCAACCGTTCTCCAATGATCTGGGAGAACTAGCCATTTCTAGTTCCGACATCTTGCAGGAGCTTGTGGCCACGTCTGATGGAAAGGAGCTGATCCAAAACCTGGAACATCTCTGCTTGGAAAATCTCAATGTACTGGAGAGAGTAATATGGCTGAACGCGGCGAGAAACCTTCGAAGGGTTGACATCAAGAAATGTGCAAAATTGACGCACGCCACATGGGTATTGCAGCTTGGGTACCTCGAGGAACTCGGCATTCATGATTGCCCACAGTTTAAACGGTTGATCGACCATAAGGAGCTTGCGGAGAATCCACCAGATCATGTGATCTTCCCTCGGCTTACATATCTCGATCTCAGTGATCTGCCAGAATTGTCTGATATATGTGTGCTGCCTTGTGAATTTAAGTCGTCGCTGGCGCTTCTTGTTGAGAACTGCGACAAGCTGATGAACATATCGTTCCACTACCCACCCGGTCATGACCAGAAAAATATTAGGGTTTTCTGCGACAATGAATGGTTCAATAGACTCGAGTGCAAGCCAAATATCATGAAGTCCTACCTATCGCAAAACATGAGATTTTCTGCTATTTGAAGATTGTTTTATCTGTACAGCTGAAAATTTGTTATTTCTCTCGTGGTGTGATCTGGCAGCAAGATGCCCACGAGCATTCTATACTATACGTACGATACCAGGGTAACAAACTATTAGGACTCGAGAGCATTCTTT]

[+] EMBL CB651650             [TAGAGTCAGACGACCACCAGCAAAACCAGAGAAAAGAGGATCATGGTGTCCGCTTGGACCATCGTCCCCGGCATCATCGTTTCGCTGATCGTGCTTGTGGTCACCAAGCTGTGGGATCCAATCGCCCAGGTCTACGGGTACCCGTTCGATGCGGAAAGGCGCGTGCAGAAACTCGTCGATGAGTTCTCCAAGCTGCAAGATCAGTTGGGCGAGCTGGGGATTTTGGATCCCAAACCCTCGTCCGCAGTGCTCTCGGGTTGGCTGCAGCGGGCGGCTGGATGCAAGGACAAGGTGGAGGAGATAAAGCGCCGACATGAATCTGTGAAGAGCGTGGGGGTCCAGGGCCTCCTACCCCGGATCAACGTGGTCCGGCACCTCTGCGCCATCGGCAGGGATGCAGATCTGGAGCTAGAAGAAGTCAAGGATCTCATCGCCAAAGGAGAGGGCCACTTGAAGGAGGCGGGTGCTGCTCCCCATCCGATTCCGATTCCGATTCCTCTACTACCTCCACCGGCGGCAGAATTCGACAACGGCCAGCTTGCCCAGTCAATCCTCGACACGGCAGCGGCCGGCACATGGGGAGTTGGGATCCAGGCAATGAAACCTCACCTGACCAGCGTCCTAGATTTTGTCCGGGAAGACGGCGGCGGAGCTCCTGGCGTGCTAGGAGTATGGGGCATGGGCGGCGCCGGCAAAACCACGCTTCTCAAGCTCGCGCGCGATCCACGAGTACAAACCTTGGACCATATTGTTCTCGCTGAGGCTGGCAAGTGCTGCGATATCGCCAAGCTTCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK072670             [  GAGTCAGACGACCACCAGCAAAACCAGAGAAAAGAGGATCATGGTGTCCGCTTGGACCATCGTCCCCGGCATCATCGTTTCGCTGATCGTGCTTGTGGTCACCAAGCTGTGGGATCCAATCGCCCAGGTCTACGGGTACCCGTTCGATGCGGAAAGGCGCGTGCAGAAACTCGTCGATGAGTTCTCCAAGCTGCAAGATCAGTTGGGCGAGCTGGGGATTTTGGATCCCAAACCCTCGTCCGCAGTGCTCTCGGGTTGGCTGCAGCGGGCGGCTGGATGCAAGGACAAGGTGGAGGAGATAAAGCGCCGACATGAATCTGTGAAGAGCGTGGGGGTCCAGGGCCTCCTACCCCGGATCAACGTGGTCCGGCACCTCTGCGCCATCGGCAGGGATGCAGATCTGGAGCTAGAAGAAGTCAAGGATCTCATCGCCAAAGGAGAGGGCCACTTGAAGGAGGCGGGTGCTGCTCCCCATCCGATTCCGATTCCGATTCCTCTACTACCTCCACCGGCGGCAGAATTCGACAACGGCCAGCTTGCCCAGTCAATCCTCGACACGGCAGCGGCCGGCACATGGGGAGTTGGGATCCAGGCAATGAAACCTCACCTGACCAGCGTCCTAGATTTTGTCCGGGAAGACGGCGGCGGAGCTCCTGGCGTGCTAGGAGTATGGGGCATGGGCGGCGCCGGCAAAACCACGCTTCTCAAGCTCGCGCGCGATCCACGAGTACAAACCTTGGACCATATTGTTCTCGCTGAGGCTGGCAAGTGCTGCGATATCGCCAAGCTTCAGGACAGCATTGCACAGGGCACGAGCCTGGTGTTGCCTCCTTCGCTCAGTGTCACCAACCGTGCTACCGTCCTGTGCAACCATCTTCGCAACAAGAAATTCTTGCTGCTGCTGGATGACCTGTGGAACTACATTGATTTGGAGGCTGTCGGCATCCCGTTGCCCCTTGGACGGGGGAATCAACGTAAGGTTGTATTGACATCACGAAGCGAGGCCGTATGTGTCAGCATGGCACGCCAAGGAGTTACCATCAGAATGGGGTGCCTAGATCAACAAGATGCGTTCAAGCTCTTCGAGGATAAAGTTGGGAGTGCTACCATCAATGCTGATACTAGGATTCCAGAGCTTGCCAGGCAGGTAGCCGAAATGTGCGGTGGTCTGCCATTAGTGCTGTGCGTCATCGGTCGATCCATGTGCACGAAGAAGAATTATAAGCTGTGGGTGGATGCAGTCAACAGGTTGGAGAAGTCAAAGGTCCATAATAACCTAGTTGGAGACGATGATATATTCAACATCCTAAGGTACAGCTTCGATGGACTACATGACGACGAAGCACGGGGTTGTTTTCTGGCGTGCACCCTGTTCCCTCCATTTTACATTGAGAAGAAGCGACTCATCCGGTGGTGTATGGGGCTTGGTTTCTTGGATCCCGCCAACGGTTTTGAAGGAGGAGAGTCTGTCATCGATTCCCTGCAGGGAGCATCGCTCCTGGAGAGCGCTGGAAGCTATTCTGTTGATATGCACGACATCATCCGCGACATGGCGCTGTGGATTGTAAGGGGCCCTGGAGGTGAGAAGTGGAGCGTGCTGAATCGAGCATGGGTGCAGGATGCAACCATACGCAAAATGAACAACGGGTATTGGACTCGGGAAGAATGGCCTCCCAAGGATACATGGCCTGAGCTTGAGATGCTTGCGATGGAAAGCAATCGCTCCTACCTTGATCCGTGGAAGGTTTCGTCCATCGGCCAGATGACAAACATCAGCTTTCTGGAACTGGTGTCTTTAGATACATTTCCAATGGAGATCTGTGAGCTGCATAAGCTCGAATACCTCTGCATCAAAGCAGGGAGTATGTCTAGGCTGCCAATTGAACTCGGGAAACTGTCGAAACTCAAGCAATTGCATCTGCGGCAGTCTTGCAGTCTTGGCGAGATACCGACAGGATTGATCTCGCAGCTCGTAAACCTGCAGGTGCTGGACCTTTTCTGCAGCAGCATCGATTATCCCTACCGTCCAAAATCTGCTGCTGGTGGCCTTTACAATTTTCTGGGTGAACTGGCCGAAGCTAGAGCATCGGAGAAGTTGAAGATTCTTGGGATTTGCCTGGATGCGACGCGTGATAATAGGGCATTTCTGAAGCAGTTGATGCAGAAGCAAGTGCGAATAAGGTCGCTCTGCTTAAGCTTCATCAATCCAATCTCGCCTGGACATGATCAACCCCAGCCGGCCACCAGCAGATACATGATCGCCGAACTGCAACCGTTCTCCAATGATCTGGGAGAACTAGCCATTTCTAGTTCCGACATCTTGCAGGAGCTTGTGGCCACGTCTGATGGAAAGGAGCTGATCCAAAACCTGGAACATCTCTGCTTGGAAAATCTCAATGTACTGGAGAGAGTAATATGGCTGAACGCGGCGAGAAACCTTCGAAGGGTTGACATCAAGAAATGTGCAAAATTGACGCACGCCACATGGGTATTGCAGCTTGGGTACCTCGAGGAACTCGGCATTCATGATTGCCCACAGTTTAAACGGTTGATCGACCATAAGGAGCTTGCGGAGAATCCACCAGATCATGTGATCTTCCCTCGGCTTACATATCTCGATCTCAGTGATCTGCCAGAATTGTCTGATATATGTGTGCTGCCTTGTGAATTTAAGTCGTCGCTGGCGCTTCTTGTTGAGAACTGCGACAAGCTGATGAACATATCGTTCCACTACCCACCCGGTCATGACCAGAAAAATATTAGGGTTTTCTGCGACAATGAATGGTTCAATAGACTCGAGTGCAAGCCAAATATCATGAAGTCCTACCTATCGCAAAACATGAGATTTTCTGCTATTTGAAGATTGTTTTATCTGTACAGCTGAAAATTTGTTATTTCTCTCGTGGTGTGATCTGGCAGCAAGATGCCCACGAGCATTCTATACTATACGTACGATACCAGGGTAACAAACTATTAGGACTCGAGAGCATTCTTT]
[-] EMBL CB651651             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATCGCTCNTACCTTGATCCGTGGAAGGTTTCGTCCATCGGCCAGATGACAAACATCAGCTTTCTGGAACTGGTGTCTTTAGATACATTTCCAATGGAGATCTGTGAGCTGCATAAGCTCGAATACCTCTGCATCAAAGCAGGGAGTATGTCTAGGCTGCCAATTGAACTCGGGAAACTGTCGAAACTCAAGCAATTGCATCTGCGGCAGTCTTGCAGTCTTGGCGAGATACCGACAGGATTGATCTCGCAGCTCGTAAACCTGCAGGTGCTGGACCTTTTCTGCAGCAGCATCGATTATCCCTACCGTCCAAAATCTGCTGCTGGTGGCCTTTACAATTTTCTGGGTGAACTGGCCGAAGCTAGAGCATCGGAGAAGTTGAAGATTCTTGGGATTTGCCTGGATGCGACGCGTGATAATAGGGCATTTCTGAAGCAGTTGATGCAGAAGCAAGTGCGAATAAGGTCGCTCTGCTTAAGCTTCATCAATCCAATCTCGCCTGGACATGATCAACCCCAGCCGGCCACCAGCAGATACATGATCGCCGAACTGCAACCGTTCTCCAATGATCTGGGAGAACTAGCCATTTCTAGTTCCGACATCTTGCAGGAGCTTGTGGCCACGTCTGATGGAAAGGAGCTGATCCAAAACCTGGAACATCTCTGCTTGGAAAATCTCAATGTACTGGAGAGAGTAATATGGCTGAACGCGGCGAGAAACCTTCGAAGGGTTGACATCAAGAAATGTGCAAAATTGACGCACGCCACATGGGTATTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_5636#0
TAGAGTCAGACGACCACCAGCAAAACCAGAGAAAAGAGGATCATGGTGTCCGCTTGGACC
ATCGTCCCCGGCATCATCGTTTCGCTGATCGTGCTTGTGGTCACCAAGCTGTGGGATCCA
ATCGCCCAGGTCTACGGGTACCCGTTCGATGCGGAAAGGCGCGTGCAGAAACTCGTCGAT
GAGTTCTCCAAGCTGCAAGATCAGTTGGGCGAGCTGGGGATTTTGGATCCCAAACCCTCG
TCCGCAGTGCTCTCGGGTTGGCTGCAGCGGGCGGCTGGATGCAAGGACAAGGTGGAGGAG
ATAAAGCGCCGACATGAATCTGTGAAGAGCGTGGGGGTCCAGGGCCTCCTACCCCGGATC
AACGTGGTCCGGCACCTCTGCGCCATCGGCAGGGATGCAGATCTGGAGCTAGAAGAAGTC
AAGGATCTCATCGCCAAAGGAGAGGGCCACTTGAAGGAGGCGGGTGCTGCTCCCCATCCG
ATTCCGATTCCGATTCCTCTACTACCTCCACCGGCGGCAGAATTCGACAACGGCCAGCTT
GCCCAGTCAATCCTCGACACGGCAGCGGCCGGCACATGGGGAGTTGGGATCCAGGCAATG
AAACCTCACCTGACCAGCGTCCTAGATTTTGTCCGGGAAGACGGCGGCGGAGCTCCTGGC
GTGCTAGGAGTATGGGGCATGGGCGGCGCCGGCAAAACCACGCTTCTCAAGCTCGCGCGC
GATCCACGAGTACAAACCTTGGACCATATTGTTCTCGCTGAGGCTGGCAAGTGCTGCGAT
ATCGCCAAGCTTCAGGACAGCATTGCACAGGGCACGAGCCTGGTGTTGCCTCCTTCGCTC
AGTGTCACCAACCGTGCTACCGTCCTGTGCAACCATCTTCGCAACAAGAAATTCTTGCTG
CTGCTGGATGACCTGTGGAACTACATTGATTTGGAGGCTGTCGGCATCCCGTTGCCCCTT
GGACGGGGGAATCAACGTAAGGTTGTATTGACATCACGAAGCGAGGCCGTATGTGTCAGC
ATGGCACGCCAAGGAGTTACCATCAGAATGGGGTGCCTAGATCAACAAGATGCGTTCAAG
CTCTTCGAGGATAAAGTTGGGAGTGCTACCATCAATGCTGATACTAGGATTCCAGAGCTT
GCCAGGCAGGTAGCCGAAATGTGCGGTGGTCTGCCATTAGTGCTGTGCGTCATCGGTCGA
TCCATGTGCACGAAGAAGAATTATAAGCTGTGGGTGGATGCAGTCAACAGGTTGGAGAAG
TCAAAGGTCCATAATAACCTAGTTGGAGACGATGATATATTCAACATCCTAAGGTACAGC
TTCGATGGACTACATGACGACGAAGCACGGGGTTGTTTTCTGGCGTGCACCCTGTTCCCT
CCATTTTACATTGAGAAGAAGCGACTCATCCGGTGGTGTATGGGGCTTGGTTTCTTGGAT
CCCGCCAACGGTTTTGAAGGAGGAGAGTCTGTCATCGATTCCCTGCAGGGAGCATCGCTC
CTGGAGAGCGCTGGAAGCTATTCTGTTGATATGCACGACATCATCCGCGACATGGCGCTG
TGGATTGTAAGGGGCCCTGGAGGTGAGAAGTGGAGCGTGCTGAATCGAGCATGGGTGCAG
GATGCAACCATACGCAAAATGAACAACGGGTATTGGACTCGGGAAGAATGGCCTCCCAAG
GATACATGGCCTGAGCTTGAGATGCTTGCGATGGAAAGCAATCGCTCCTACCTTGATCCG
TGGAAGGTTTCGTCCATCGGCCAGATGACAAACATCAGCTTTCTGGAACTGGTGTCTTTA
GATACATTTCCAATGGAGATCTGTGAGCTGCATAAGCTCGAATACCTCTGCATCAAAGCA
GGGAGTATGTCTAGGCTGCCAATTGAACTCGGGAAACTGTCGAAACTCAAGCAATTGCAT
CTGCGGCAGTCTTGCAGTCTTGGCGAGATACCGACAGGATTGATCTCGCAGCTCGTAAAC
CTGCAGGTGCTGGACCTTTTCTGCAGCAGCATCGATTATCCCTACCGTCCAAAATCTGCT
GCTGGTGGCCTTTACAATTTTCTGGGTGAACTGGCCGAAGCTAGAGCATCGGAGAAGTTG
AAGATTCTTGGGATTTGCCTGGATGCGACGCGTGATAATAGGGCATTTCTGAAGCAGTTG
ATGCAGAAGCAAGTGCGAATAAGGTCGCTCTGCTTAAGCTTCATCAATCCAATCTCGCCT
GGACATGATCAACCCCAGCCGGCCACCAGCAGATACATGATCGCCGAACTGCAACCGTTC
TCCAATGATCTGGGAGAACTAGCCATTTCTAGTTCCGACATCTTGCAGGAGCTTGTGGCC
ACGTCTGATGGAAAGGAGCTGATCCAAAACCTGGAACATCTCTGCTTGGAAAATCTCAAT
GTACTGGAGAGAGTAATATGGCTGAACGCGGCGAGAAACCTTCGAAGGGTTGACATCAAG
AAATGTGCAAAATTGACGCACGCCACATGGGTATTGCAGCTTGGGTACCTCGAGGAACTC
GGCATTCATGATTGCCCACAGTTTAAACGGTTGATCGACCATAAGGAGCTTGCGGAGAAT
CCACCAGATCATGTGATCTTCCCTCGGCTTACATATCTCGATCTCAGTGATCTGCCAGAA
TTGTCTGATATATGTGTGCTGCCTTGTGAATTTAAGTCGTCGCTGGCGCTTCTTGTTGAG
AACTGCGACAAGCTGATGAACATATCGTTCCACTACCCACCCGGTCATGACCAGAAAAAT
ATTAGGGTTTTCTGCGACAATGAATGGTTCAATAGACTCGAGTGCAAGCCAAATATCATG
AAGTCCTACCTATCGCAAAACATGAGATTTTCTGCTATTTGAAGATTGTTTTATCTGTAC
AGCTGAAAATTTGTTATTTCTCTCGTGGTGTGATCTGGCAGCAAGATGCCCACGAGCATT
CTATACTATACGTACGATACCAGGGTAACAAACTATTAGGACTCGAGAGCATTCTTT
clustalw multiple alignements is not computed in this case