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Oryza sativa
cluster # 564 cluster # 564       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_564#0 length = 1604 sequences # 2  

consensusID : consensus_564#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1604
fasta sequence
                              [ACACACCGCCGTGGACGCCGAGGACTACACTAACCGGCGGCTGCGGCGGCAACTCCGGCGGATCCACCCGCAGCTAGGCCGAGTCGCGCTGCCGGGGAAGAGGCAGCGGGAACCCTAGCCGGCCGAGCCTAGCCCGGGGGAGGAGGAGGAGGCAGGATGCTGTTCCAGGTGGGAGGGCAGGGGGCGCGGCCCACCTTCTTCGAGATGTCGGCCGCGCAGCAGC-TGCCGGCCAGCCTCCGCGCCGCGCTCTCCTACTCGCTCGGGGTTTTTGCACTAAGACGGCCGTTGTTACAT-AAAGTTTTAGATTACGA-GGATGAATTCTTTGCCTTGTTAATGGCTGTCCTTGAGTCCCATAGTTTGCGAACGACAGATGGTTCTTTTTCGGAGTCATTGTATGGTCTCAGGCGGAGACCTGTTAAGGTTTCAGTAAAGAGAAGTAGTTCTGGTGCAGAATCCAATGATAAAGCCTATGATTCTGTTCTAAGGAAGCGCCAGAAAGTCCTTTCTGTTGTTTTTTTGGTTGTTTTGCCATATTTCAAGTCAAAGCTGCAGTCCATATATAACAAAGAAAGGGAGGCCAGGTTGCAGGCAAGCCTTTGGGGTCAGGGTGATGTTAGATTCGATGAAGCTGACCTTGTTTCAGATCAAGGGGAGACTTCTCAAGCACAAGTCGAGGCTACAACTGGAGAGGTATCAAATATGGCACGTATTAAGAAGAATTTTGCGGCATTAATAGGTGTTTGCTATCCATGGATTCATGCGACCAATGAAGGTCTCTCATTTGCTTACCAGTTGCTGTATTTGTTGGATGGTACTGCATTTTATAGTCCAGCACTGCATGCTCTTGGGCTTCATGTTTGTCGTGCTACAGGACAAGAGCTGATGGAATCATCTTCTAGGGTATCAAGAATCAGAAATCGAGAACTTGAGAGACTTCGTGGTCCTCCATGGCTGAAGACCATGCAAAGGGTGTTACTTAACTGTATGTACACTAGCCTAGATTATGCACAAACTGGTTTGATTGCTGCAGTTTTCTTTTTCAAGATGATGGAATGGTGGTATCAATCTGCTGAGGAAAGAATGTCAGCTCCGACTGTATATCCCCCACCCCCTCCTCCACCTCTGCCAAAGGTTGCTAAAGATGGACTTCCCTTGCCCCCTGACAGGACATTGTGCCCCTTATGCTGCCAGAAGCGCAATAACCCTTCTGTTCTTTCTGCTTCTGGTTTTGTATTCTGCTACAGTTGCATTTTTAAGTCAGTCTCCCAGCATAAAAGGTGCCCCATCACATTGATGCCTGCCACAGTAGAACAAATCAGACGCCTCTTTCATGATTTGTAGTTTGATTAGACAGAACACACTCTTCTCCCCAAAGATCAGGGGAAGCCGGATATAAAGAATCGTACTATGCAGCTATTCATTTTTGTTGAACAGACCACAAGGAACTCAGCCCTTCTGACACTCAAGGCATGGCCATCTACTCAAGAACAGTGCTGTTGATTCTTCCCCCGTTAGGAAATTCTATGTTCATACAAAGCTTGTATTCGTTTTCTTCTGTTGAAATCAAAAAAACATGCACAGCTCGAGATTTTGGTACTGATGTG]

[+] EMBL AK071253             [ACACACCGCCGTGGACGCCGAGGACTACACTAACCGGCGGCTGCGGCGGCAACTCCGGCGGATCCACCCGCAGCTAGGCCGAGTCGCGCTGCCGGGGAAGAGGCAGCGGGAACCCTAGCCGGCCGAGCCTAGCCCGGGGGAGGAGGAGGAGGCAGGATGCTGTTCCAGGTGGGAGGGCAGGGGGCGCGGCCCACCTTCTTCGAGATGTCGGCCGCGCAGCAGC TGCCGGCCAGCCTCCGCGCCGCGCTCTCCTACTCGCTCGGGGTTTTTGCACTAAGACGGCCGTTGTTACAT AAAGTTTTAGATTACGA GGATGAATTCTTTGCCTTGTTAATGGCTGTCCTTGAGTCCCATAGTTTGCGAACGACAGATGGTTCTTTTTCGGAGTCATTGTATGGTCTCAGGCGGAGACCTGTTAAGGTTTCAGTAAAGAGAAGTAGTTCTGGTGCAGAATCCAATGATAAAGCCTATGATTCTGTTCTAAGGAAGCGCCAGAAAGTCCTTTCTGTTGTTTTTTTGGTTGTTTTGCCATATTTCAAGTCAAAGCTGCAGTCCATATATAACAAAGAAAGGGAGGCCAGGTTGCAGGCAAGCCTTTGGGGTCAGGGTGATGTTAGATTCGATGAAGCTGACCTTGTTTCAGATCAAGGGGAGACTTCTCAAGCACAAGTCGAGGCTACAACTGGAGAGGTATCAAATATGGCACGTATTAAGAAGAATTTTGCGGCATTAATAGGTGTTTGCTATCCATGGATTCATGCGACCAATGAAGGTCTCTCATTTGCTTACCAGTTGCTGTATTTGTTGGATGGTACTGCATTTTATAGTCCAGCACTGCATGCTCTTGGGCTTCATGTTTGTCGTGCTACAGGACAAGAGCTGATGGAATCATCTTCTAGGGTATCAAGAATCAGAAATCGAGAACTTGAGAGACTTCGTGGTCCTCCATGGCTGAAGACCATGCAAAGGGTGTTACTTAACTGTATGTACACTAGCCTAGATTATGCACAAACTGGTTTGATTGCTGCAGTTTTCTTTTTCAAGATGATGGAATGGTGGTATCAATCTGCTGAGGAAAGAATGTCAGCTCCGACTGTATATCCCCCACCCCCTCCTCCACCTCTGCCAAAGGTTGCTAAAGATGGACTTCCCTTGCCCCCTGACAGGACATTGTGCCCCTTATGCTGCCAGAAGCGCAATAACCCTTCTGTTCTTTCTGCTTCTGGTTTTGTATTCTGCTACAGTTGCATTTTTAAGTCAGTCTCCCAGCATAAAAGGTGCCCCATCACATTGATGCCTGCCACAGTAGAACAAATCAGACGCCTCTTTCATGATTTGTAGTTTGATTAGACAGAACACACTCTTCTCCCCAAAGATCAGGGGAAGCCGGATATAAAGAATCGTACTATGCAGCTATTCATTTTTGTTGAACAGACCACAAGGAACTCAGCCCTTCTGACACTCAAGGCATGGCCATCTACTCAAGAACAGTGCTGTTGATTCTTCCCCCGTTAGGAAATTCTATGTTCATACAAAGCTTGTATTCGTTTTCTTCTGTTGAAATCAAAAAAACATGCACAGCTCGAGATTTTGGTACTGATGTG]
[+] EMBL C91835               [     CCGCCGTGGACGCCGAGGACTACACTAACCGGCGGCTGCGGCGGCAACTCCGGCGGATCCACCCGCAGCTAGGCCGANTCGCGCTGCCGGGGAAGAGGCAGCGGGAACCCTANCCGGCCGAGCCTANCCCGGGGGAGGAGGAGGAGGCAGGATGCTGTTCCANGTGGGATGGCAGGGGGCGCGGCCCACCTTCTTCGAGATGTCGGCCGCGCA CAGCTTGCCGGCCAGCCTCCANGCCGCGCTCTCNTACTCGATCGGGGTTTTTGCACTAAGACGGCCGTTGTTACATAAAAGTTTTAGATTACGAGGGNTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_564#0 ACACACCGCCGTGGACGCCGAGGACTACACTAACCGGCGGCTGCGGCGGCAACTCCGGCG GATCCACCCGCAGCTAGGCCGAGTCGCGCTGCCGGGGAAGAGGCAGCGGGAACCCTAGCC GGCCGAGCCTAGCCCGGGGGAGGAGGAGGAGGCAGGATGCTGTTCCAGGTGGGAGGGCAG GGGGCGCGGCCCACCTTCTTCGAGATGTCGGCCGCGCAGCAGCTGCCGGCCAGCCTCCGC GCCGCGCTCTCCTACTCGCTCGGGGTTTTTGCACTAAGACGGCCGTTGTTACATAAAGTT TTAGATTACGAGGATGAATTCTTTGCCTTGTTAATGGCTGTCCTTGAGTCCCATAGTTTG CGAACGACAGATGGTTCTTTTTCGGAGTCATTGTATGGTCTCAGGCGGAGACCTGTTAAG GTTTCAGTAAAGAGAAGTAGTTCTGGTGCAGAATCCAATGATAAAGCCTATGATTCTGTT CTAAGGAAGCGCCAGAAAGTCCTTTCTGTTGTTTTTTTGGTTGTTTTGCCATATTTCAAG TCAAAGCTGCAGTCCATATATAACAAAGAAAGGGAGGCCAGGTTGCAGGCAAGCCTTTGG GGTCAGGGTGATGTTAGATTCGATGAAGCTGACCTTGTTTCAGATCAAGGGGAGACTTCT CAAGCACAAGTCGAGGCTACAACTGGAGAGGTATCAAATATGGCACGTATTAAGAAGAAT TTTGCGGCATTAATAGGTGTTTGCTATCCATGGATTCATGCGACCAATGAAGGTCTCTCA TTTGCTTACCAGTTGCTGTATTTGTTGGATGGTACTGCATTTTATAGTCCAGCACTGCAT GCTCTTGGGCTTCATGTTTGTCGTGCTACAGGACAAGAGCTGATGGAATCATCTTCTAGG GTATCAAGAATCAGAAATCGAGAACTTGAGAGACTTCGTGGTCCTCCATGGCTGAAGACC ATGCAAAGGGTGTTACTTAACTGTATGTACACTAGCCTAGATTATGCACAAACTGGTTTG ATTGCTGCAGTTTTCTTTTTCAAGATGATGGAATGGTGGTATCAATCTGCTGAGGAAAGA ATGTCAGCTCCGACTGTATATCCCCCACCCCCTCCTCCACCTCTGCCAAAGGTTGCTAAA GATGGACTTCCCTTGCCCCCTGACAGGACATTGTGCCCCTTATGCTGCCAGAAGCGCAAT AACCCTTCTGTTCTTTCTGCTTCTGGTTTTGTATTCTGCTACAGTTGCATTTTTAAGTCA GTCTCCCAGCATAAAAGGTGCCCCATCACATTGATGCCTGCCACAGTAGAACAAATCAGA CGCCTCTTTCATGATTTGTAGTTTGATTAGACAGAACACACTCTTCTCCCCAAAGATCAG GGGAAGCCGGATATAAAGAATCGTACTATGCAGCTATTCATTTTTGTTGAACAGACCACA AGGAACTCAGCCCTTCTGACACTCAAGGCATGGCCATCTACTCAAGAACAGTGCTGTTGA TTCTTCCCCCGTTAGGAAATTCTATGTTCATACAAAGCTTGTATTCGTTTTCTTCTGTTG AAATCAAAAAAACATGCACAGCTCGAGATTTTGGTACTGATGTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)