cluster # 5665

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Oryza sativa
cluster # 5665 cluster # 5665 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5665#0 length = 782 sequences # 3

consensusID : consensus_5665#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 782
fasta sequence

                              [TTTTTTTTTTGGAGTATATACTTGCNTTAGTTGCTCTTCATTATTTGCATTGATCTTCCTCTT-GTGCATGACAAGGTACTAGTAGTACGGAATTTACATGGTTGGTACCAAAAGGGGGGCCCCAAATGGGAAAAAAGAAGAAGGGAGAA-AGGTGAAGAACTAAACAGGATTATGGCACAACAATGGCCAGACAGCCATCAGTTTCTCTCGTCCGTCGTTGATTAATTAGCTCTCTGCGCTTCTGCAATGTGGACACCATTTTCGAGCACCTGTGTTGGTGTAGAATCCACGATCGATCAGCGTCACGGGTTACCCTGCCGATGTAATCGCTTGGACGGC-CCAGATCACGCGCTTCTCTCTAGCTAGCCTCGCCGGTTAAATTCAATTGTTACAGCCTCAACCGTGTCCTGGACAGGCGATTCCACTCCACGAGCCGCAGCAAGAACTCCATCACCTCGGCGGG-CTCCTGG-AGGGAGAAGGAGGCGCTCGT-CTCCT-TGGGGTGC-TGGACCACCAAGGGATCCCCACGCCCTGCCCACGCCGCCGCAAAACCTGCCCGGATCATGCACACGGCTCGCCGATTAGTCCAACGTAGAAGAAGACGTACGTTGTCGCTAGCTGCACGCGACGAACCGGCCGTACGTTCGTCGAACCACTTGCAAACGAAGTAGTGGTAGCGTCTCGTGTTACTGCTGCTGCTACACGTAGTCGTAGCGTGGCAGCATGCAGTAATTTTTGTCGGTTAGTAGTACAAGTATTTATTTACCTTGAACGCGTCCTCGTCC]

[-] EMBL BI807336             [TTTTTTTTTTGGAGTATATACTTGCNTTAGTTGCTCTTCATTATTTGCATGGATCTTCCTCTTGGTGCATGACAAGGTACTAGTAGTACGGAATTTACATGGTTGGTACCAAAAGGGGGGCCCCAAATGGGAAAAAAGAAGAAGGGAGAANAGGTGAAGAACTAAACAGGATTATGGCACAACAATGGCCAGACAGCCATCAGTTTCTCTCGTCCGTCGTTGATTAATTAGCTCTCTGCGCTTCTGCAATGTGGACACCATTTTCGAGCACCTGTGTTGGTGTAGAATCCACGATCGATCAGCGTCACGGGTTACCCTGCCGATGTAATCGCTTGGACGGCGCCAGATCACGCGCTTCTCTCTAGCTAGCCTCGCCGGTTAAATTCAATGGTTACAGCCTCAACCGTGTCCTGGACAGGNGATTCCACTCCACGAGCCG AGCAAGAACTCCATCACCTCGGAGGGCCTCCTGGCAGGGAGAAGGAGGCGCTCGTACTCCTCTGGGGTGC TGGACCACCAAGGGATCC                                                                                                                                                                                                                                                                     ]
[+] EMBL CB644545             [                    CTTGCATTACTTGCTCTTCCTTATTTGCATTGATCTTCCTCTT GTGCATGACAAGGAACTATTAGTACGGAATTTACATGGTTGGTACCAAAAGGGGGGCCCCAAATGGGAAAAAAGAAGAAGGGAGAA AGGTGAAGAACTAAACAGGATTATGGCACAACAATGGCCAGACAGCCATCAGTTTCTCTCGTCCGTCGTTGATTAATTAGCTCTCTGCGCTTCTGCAATGTGGACACCATTTTCGAGCACCTGTGTTGGTGTAGAATCCACGATCGATCAGCGTCACGGGTTACCCTGCCGATGTAATCGCTTGGACGGC CCAGATCACGCGCTTCTCTCTAGCTAGCCTCGCCGGTTAAATTCAATTGTTACAGCCTCAACCGTGTCCTGGACAGGCGATTCCACTCCACGAGCCGCAGCAAGAACTCCATCACCTCGGCGGG CTCCTGG AGGGAGAAGGAGGCGCTCGT CTCCT TGGGGTGCTTGGA CACCA  GGATCCCCACGCCCTGCCCACGCCGCCGCAAAACCTGCCCGGATCATGCACACGGCTCGCCGATTAGTCCAACGTAGAAGAAGACGTACGTTGTCGCTAGCTGCACGCGACGAACCGGCCGTACGTTCGTCGAACCACTTGCAAACGAAGTAGTGGTAGCGTCTCGTGTTACTGCTGCTGCTACACGTAGTCGTAGCGTGGCAGCATGCAGTAATTTTTGTCGGTTAGTAGTACAAGTATTTATTTACCTTGAACGCGTCCTCGTCC]
[-] EMBL CB680752             [                                 CTCTTCATTATTTGCATTGATCTTCCTCTT GTGCATGACAAGGTACTAGTAGTACGGAATTTACATGGTTGGTACCAAAAGGGGGGCCCCAAATGGGAAAAAAGAAGAAGGGAGAA AGGTGAAGAACTAAACAGGATTATGGCACAACAATGGCCAGACAGCCATCAGTTTCTCTCGTCCGTCGTTGATTAATTAGCTCTCTGCGCTTCTGCAATGTGGACACCATTTTCGAGCACCTGTGTTGGTGTAGAATCCACGATCGATCAGCGTCACGGGTTACCCTGCCGATGTAATCGCTTGGACGGC CCAGATCACGCGCTTCTCTCTAGCTAGCCTCGCCGGTTAAATTCAATTGTTACAGCCTCAACCGTGTCCTGGACAGGCGATTCCACTCCACGAGCCGCAGCAAGAACTCCATCACCTCGGCGGG CTCCTGG AGGGAGAAGGAGGCGCTCGT CTCCT TGGG                                                                                                                                                                                                                                                                                            ]




>consensus_5665#0
TTTTTTTTTTGGAGTATATACTTGCNTTAGTTGCTCTTCATTATTTGCATTGATCTTCCT
CTTGTGCATGACAAGGTACTAGTAGTACGGAATTTACATGGTTGGTACCAAAAGGGGGGC
CCCAAATGGGAAAAAAGAAGAAGGGAGAAAGGTGAAGAACTAAACAGGATTATGGCACAA
CAATGGCCAGACAGCCATCAGTTTCTCTCGTCCGTCGTTGATTAATTAGCTCTCTGCGCT
TCTGCAATGTGGACACCATTTTCGAGCACCTGTGTTGGTGTAGAATCCACGATCGATCAG
CGTCACGGGTTACCCTGCCGATGTAATCGCTTGGACGGCCCAGATCACGCGCTTCTCTCT
AGCTAGCCTCGCCGGTTAAATTCAATTGTTACAGCCTCAACCGTGTCCTGGACAGGCGAT
TCCACTCCACGAGCCGCAGCAAGAACTCCATCACCTCGGCGGGCTCCTGGAGGGAGAAGG
AGGCGCTCGTCTCCTTGGGGTGCTGGACCACCAAGGGATCCCCACGCCCTGCCCACGCCG
CCGCAAAACCTGCCCGGATCATGCACACGGCTCGCCGATTAGTCCAACGTAGAAGAAGAC
GTACGTTGTCGCTAGCTGCACGCGACGAACCGGCCGTACGTTCGTCGAACCACTTGCAAA
CGAAGTAGTGGTAGCGTCTCGTGTTACTGCTGCTGCTACACGTAGTCGTAGCGTGGCAGC
ATGCAGTAATTTTTGTCGGTTAGTAGTACAAGTATTTATTTACCTTGAACGCGTCCTCGT
CC

clustalw multiple alignements is not computed in this case