cluster # 5690

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Oryza sativa
cluster # 5690 cluster # 5690 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5690#0 length = 1236 sequences # 3
consensusID : consensus_5690#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1236
fasta sequence
                              [TCATTGGTTGCGAAGAACACAGAGAGAAAGAGAGAGAGGAGTAGCTGGTCCAGGAGATCGCAGCTGAGATCACCGGAATTTTCTAAAAACAAGAGAAGAGACAAATATTTTTTCGATCGAGATGAGCAGCAGCGAGCAGGCGGCAATGGAGTCGGGTGGTTGCCAGCATCATCAGGAGAGGCAGGCGGCCACCGCGGGCGAGAGCGCCAAGAAGCTGTGTCGCGTGGTGCGCGCCGTGTACCTCGTCCTCGTCAAGGGGCTCGGCAAGCACCAGCCCAAGCTCGCCGCGCTCGGCGTCCACCTGCACCAGATGATGTCCTCGAGGCGGCATGGCGGCGGTGGCCACGACCACGGCCTCGACGATTTGCGGGAGCACCGGGCGTTGCTGACGTACCTGTCGTCGACGATGTCGTGCAGGTCCATGGACCCGGCCGCGGCGGTGCACCCGTACCCGCGGGGCCGCGGCGCGCACGGCGCTGGCCGCCGTCGCAGCGGCGGCGGCATCAGCAGCGCGTCGGGAGGCGTTTCCGGGCTCTCCTCGATGTCGTGCCGGTCCATGGATCCCTCCGCCGCCGTGTCGCAGTACCAGTACCGGCCCCGTGAGGTCGAGTTCAGCTGCAGCAGCACGCCGCTGCACAGGCGCCGCCGCGCGCAGCGCCGCAGCCAGCTGCGCCTGCAGCAGCACGGGCAGTGGCACGACCGTTCGTCCGCCGCGGATCCGTACGGCTCGGCCGCCACGGTGTCGAGGCTGTTCGAGCTGATGGACGTGAAGGAGGAGGCCGCCGCCGAGGCGATGACGACGGATATCGACGACGAAGACGGCGACGTGGTCGCGTGGCCCGCGGTGGTGGTGCCGGCGCCGCGGCAGGTGCGGATCACGGACTCGCCGTTCCCGGCGTGGGAGGCGGACGGCGACGACGACGAAGAGGGGAGGCTCGGCGTGGTGGACCGCCGCGCCGACGAGTTCATCATGTGGTTCCACGAGCAGCTGCGCATGCAGCAGCAGCAGCGCGCCGCCGCCGCCGCCGCCAAGGAGCGGAGCACCTACTACTTCGTTAGATAGTCAGTACGGATCAGTACGGCACCATGTGAATAGTTCATGAACGCATGGATTATTGCAGAGTACATACATAGAGACGAAAATTGTGCGCATGCTTCAAGTTTTTCTCTTTCCTGTTAATTCTTGATACGATCGAGTGTGATCGAGTTGGTATATTTGATTTTGAGATGCATATA]

[+] EMBL AK067487             [TCATTGGTTGCGAAGAACACAGAGAGAAAGAGAGAGAGGAGTAGCTGGTCCAGGAGATCGCAGCTGAGATCACCGGAATTTTCTAAAAACAAGAGAAGAGACAAATATTTTTTCGATCGAGATGAGCAGCAGCGAGCAGGCGGCAATGGAGTCGGGTGGTTGCCAGCATCATCAGGAGAGGCAGGCGGCCACCGCGGGCGAGAGCGCCAAGAAGCTGTGTCGCGTGGTGCGCGCCGTGTACCTCGTCCTCGTCAAGGGGCTCGGCAAGCACCAGCCCAAGCTCGCCGCGCTCGGCGTCCACCTGCACCAGATGATGTCCTCGAGGCGGCATGGCGGCGGTGGCCACGACCACGGCCTCGACGATTTGCGGGAGCACCGGGCGTTGCTGACGTACCTGTCGTCGACGATGTCGTGCAGGTCCATGGACCCGGCCGCGGCGGTGCACCCGTACCCGCGGGGCCGCGGCGCGCACGGCGCTGGCCGCCGTCGCAGCGGCGGCGGCATCAGCAGCGCGTCGGGAGGCGTTTCCGGGCTCTCCTCGATGTCGTGCCGGTCCATGGATCCCTCCGCCGCCGTGTCGCAGTACCAGTACCGGCCCCGTGAGGTCGAGTTCAGCTGCAGCAGCACGCCGCTGCACAGGCGCCGCCGCGCGCAGCGCCGCAGCCAGCTGCGCCTGCAGCAGCACGGGCAGTGGCACGACCGTTCGTCCGCCGCGGATCCGTACGGCTCGGCCGCCACGGTGTCGAGGCTGTTCGAGCTGATGGACGTGAAGGAGGAGGCCGCCGCCGAGGCGATGACGACGGATATCGACGACGAAGACGGCGACGTGGTCGCGTGGCCCGCGGTGGTGGTGCCGGCGCCGCGGCAGGTGCGGATCACGGACTCGCCGTTCCCGGCGTGGGAGGCGGACGGCGACGACGACGAAGAGGGGAGGCTCGGCGTGGTGGACCGCCGCGCCGACGAGTTCATCATGTGGTTCCACGAGCAGCTGCGCATGCAGCAGCAGCAGCGCGCCGCCGCCGCCGCCGCCAAGGAGCGGAGCACCTACTACTTCGTTAGATAGTCAGTACGGATCAGTACGGCACCATGTGAATAGTTCATGAACGCATGGATTATTGCAGAGTACATACATAGAGACGAAAATTGTGCGCATGCTTCAAGTTTTTCTCTTTCCTGTTAATTCTTGATACGATCGAGTGTGATCGAGTTGGTATATTTGATTTTGAGATGCATATA]
[+] EMBL CB652606             [                                                                                                                                                                             AGGAGAGGCAGGCGGCCACCGCGGGCGAGAGCGCCAAGAAGCTGTGTCGCGTGGTGCGCGCCGTGTACCTCGTCCTCGTCAAGGGGCTCGGCAAGCACCAGCCCAAGCTCGCCGCGCTCGGCGTCCACCTGCACCAGATGATGTCCTCGAGGCGGCATGGCGGCGGTGGCCACGACCACGGCCTCGACGATTTGCGGGAGCACCCGGCGTTGCTGACGTACCTGTCGTCGACGATGTCGTGCAGGTCCATGGACCCGGCCGCGGCGGTGCACCCGTACCCGCGGGGCCGCGGCGCGCACGGCGCTGGCCGCCGTCGCAGCGGCGGCGGCATCAGCAGCGCGTCGGGAGGCGTTTCCGGGCTCTCCTCGATGTCGTGCCGGTCCATGGATCCCTCCGCCGCCGTGTCGCAGTACCAGTACCGGCCCCGTGAGGTCGAGTTCAGCTGCAGCAGCACGCCGCTGCACAGGCGCCGCCGCGCGCAGCGCCGCAGCCAGCTGCGCCTGCAGCAGCACGGGCAGTGGCACGACCGTTCGTCCGCCGCGGATCCGTACGGCTCGGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB652607             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCTGGCCGCCGTTGCAGCGGCGGCGGCATCAGCAGCGCGTCGGGAGGCGTTTCCGGGCTCTCCTCGATGTCGTGCCGGTCCATGGATCCCTCCGCCGCCGTGTCGCAGTACCAGTACCGGCCCCGTGAGGTCGAGTTCAGCTGCAGCAGCACGCCGCTGCACAGGCGCCGCCGCGCGCAGCGCCGCAGCCAGTTGCGCCTGCAGCAGCACGGGCAGTGGCACGACCGTTCGTCCGCCGCGGATCCGTACGGCTCGCCCGCCACGGTGTCGAGGCTGTTCGAGCTGATGGACGTGAAGGAGGAGCCCGCCGCCGAGGCGATGACGACGGATATCGACGACGAAGACGGCGACGTGGTCGCGTGGCCCGCGGTGGTGGTGCCGGCGCCGCGGCAGGTGCGGATCACGGACTCGCCGTTCCCGGCGTGGGAGGCGGACGGCGACGACGACGAAGAGGGGAGGCTCGGCGTGGTGGACCGCCGCGCCGACGAGTTCATCATGTGGTTCCACGAGCAGCTGCGCATGCAGCAGCAGCAGCGCGCCGCCGCCGCCGCCGCCAAGGAGCGGAGCACCTACTACTTCGTTAGATAGTCAGTACGGATCAGTACGGCACCATGTGAATAGTTCATGAACGCATGGATTATTGCAGAGTACATACATAGAGAGGAAAATTGTGCGCATGCTTCAAGTTTTTCTCTTTCCTGTTAATTCTTGATACGATCGAGTGTGATCGTGAAAG GTATTTGATTTT            ]




>consensus_5690#0
TCATTGGTTGCGAAGAACACAGAGAGAAAGAGAGAGAGGAGTAGCTGGTCCAGGAGATCG
CAGCTGAGATCACCGGAATTTTCTAAAAACAAGAGAAGAGACAAATATTTTTTCGATCGA
GATGAGCAGCAGCGAGCAGGCGGCAATGGAGTCGGGTGGTTGCCAGCATCATCAGGAGAG
GCAGGCGGCCACCGCGGGCGAGAGCGCCAAGAAGCTGTGTCGCGTGGTGCGCGCCGTGTA
CCTCGTCCTCGTCAAGGGGCTCGGCAAGCACCAGCCCAAGCTCGCCGCGCTCGGCGTCCA
CCTGCACCAGATGATGTCCTCGAGGCGGCATGGCGGCGGTGGCCACGACCACGGCCTCGA
CGATTTGCGGGAGCACCGGGCGTTGCTGACGTACCTGTCGTCGACGATGTCGTGCAGGTC
CATGGACCCGGCCGCGGCGGTGCACCCGTACCCGCGGGGCCGCGGCGCGCACGGCGCTGG
CCGCCGTCGCAGCGGCGGCGGCATCAGCAGCGCGTCGGGAGGCGTTTCCGGGCTCTCCTC
GATGTCGTGCCGGTCCATGGATCCCTCCGCCGCCGTGTCGCAGTACCAGTACCGGCCCCG
TGAGGTCGAGTTCAGCTGCAGCAGCACGCCGCTGCACAGGCGCCGCCGCGCGCAGCGCCG
CAGCCAGCTGCGCCTGCAGCAGCACGGGCAGTGGCACGACCGTTCGTCCGCCGCGGATCC
GTACGGCTCGGCCGCCACGGTGTCGAGGCTGTTCGAGCTGATGGACGTGAAGGAGGAGGC
CGCCGCCGAGGCGATGACGACGGATATCGACGACGAAGACGGCGACGTGGTCGCGTGGCC
CGCGGTGGTGGTGCCGGCGCCGCGGCAGGTGCGGATCACGGACTCGCCGTTCCCGGCGTG
GGAGGCGGACGGCGACGACGACGAAGAGGGGAGGCTCGGCGTGGTGGACCGCCGCGCCGA
CGAGTTCATCATGTGGTTCCACGAGCAGCTGCGCATGCAGCAGCAGCAGCGCGCCGCCGC
CGCCGCCGCCAAGGAGCGGAGCACCTACTACTTCGTTAGATAGTCAGTACGGATCAGTAC
GGCACCATGTGAATAGTTCATGAACGCATGGATTATTGCAGAGTACATACATAGAGACGA
AAATTGTGCGCATGCTTCAAGTTTTTCTCTTTCCTGTTAATTCTTGATACGATCGAGTGT
GATCGAGTTGGTATATTTGATTTTGAGATGCATATA
clustalw multiple alignements is not computed in this case