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Oryza sativa
cluster # 5729 cluster # 5729       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5729#0 length = 1762 sequences # 2  
consensus_5729#1 length = 1718 sequences # 1  

consensusID : consensus_5729#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1762
fasta sequence
                              [GAGCTGTGTCGACGCTAGCTAAGCCAACACCAACGAAGATTCGAAGCTCGCGGTTTTCTTGGCTTTGGTCGTAAGCATCAAAAATGGCCGGAGCTGGAGAATACGGCGGCGGCGGCGGCGGCGGCGGCGGCTTCGGCGGCGACTTCATGGTGCTGCGGCCGGACAAGGGCGGCATCGGCGACCTGTTCCACCTGCTGTGGTCGTGCAAGGTGGCGGAGAACGCCGCCGTGGACTGCCCCATCGGCACGGAGATCGCCGAGCGTCGGCGGCGGTGGGCGCTGTTCGTGTCGCTGGTGGCGCAGATGCTGCTGCTGTGGACGAAGAAGCCGATGGCGCTGCTCGGCGGCGGGACGGAGTACTGGATGAACCTCCTCAACGAGAATGGCGGCAGCGTCTTCATGCTCATCACCAACGCTCTGCAAGGAAAGGTGAGAATGCCAGACAAATCATCCATCAATTACCGATCATGCATTGGATTGCTTGACACAAGAATCGATCTTGACGAGAAGATCAAACCAGAGGATAGAAACTACCACGCTGCCCTGTCGATCATGGCTGCAAAACTAGCCTACGAGAACGAACTCGTCGTCAGAACTGTTGTTCAGAACCACTGGCAGATGAATTTCGTGGGCTTCTACAACTGCTGGAATGAATTCCAGGAGGACTACACGACCCAGGCGTTCATGGTGTCGGACAAGGCGGAGGACGCGAGCCTCGCCGTGGTGGCGTTCTGCGGCACGAAGCCGTTCGACACGGAGCAGTGGTGCGCCGACGTGGACTTCTCGTGGTACGAGATCCCCGGCGTCGGCAAGGTCCACGGCGGCTTCATGAAGGCGCTGGGCCTGCAGAGGAACGGCGGCTGGCCGGAGCAACCCACCGGCGCCGGAGACGACGGCGGCAGCGACAAGAAGCCGTTCGCCTACTACGTCATCCGCGAGCGGCTCAGGGCGTTCCTGGCGGAGAACCCGCGCGCCCGGTTCGTGGTCGCCGGGCACAGCCTCGGCGGCGCGCTCGCCATCCTCTTCCCGACCGTGCTGGCGCTGCACGGCGAGGAGGACATGCTGGCGAGGCTCCACGGCGTGTACACGTTCGGGCAGCCGCGCGTCGGCGACGAGGGGCTCTGCCGGTTCATGGACGGGCACCTGGCGACGCCGGTGAGCCGGTACTTCAGGTTCGTGTACTGCAACGACATCGTGCCCAGGGTGCCCTACGACGACACGGCCCTTCTGTTCAAGCACTTTGGGACGTGCCTCTACTTCGACAGCTTCTACAAAGGCCATGTGACGGAGGAGGAGCCGAACAAGAACTACTTCTCGCTGCTGACGGTGGTGCCCAAGTACGCGAACGCGGCGTGGGAGCTCGCCCGGAGCTTCGTCATCGGCTATGTCGACGGGCCGGAGTACGGTGAGGGTTGGCTGATGAGGATCGCCAGGGCCGCCGGGCTGCTGCTGCCGGGCCTGCCGCCGCACGCGCCGCAGGACTACGTGAACGCCACCAGGCTCGGCGCCGCCTCGCTCGAGCCGCTCCGATAGGTAGCTCGTCGGCGTCGGCGCCAACACATTTAGTAGTAAACTAGTAACAGGCTTGTGATTCATGATTCATGAAGTGGAATGCAACATCCACAGTGTAAATTCATGCCTTAAACACAATAATATGATTCATAAAGTGGAATGCAGCATTCATTTTCAGAATTCTTGAACAAGACAGTGTAGATTCGATGTAAATTCATGGCTTAAACACAATAATATGATGAAAATCGGTC]

[+] EMBL AK064404             [GAGCTGTGTCGACGCTAGCTAAGCCAACACCAACGAAGATTCGAAGCTCGCGGTTTTCTTGGCTTTGGTCGTAAGCATCAAAAATGGCCGGAGCTGGAGAATACGGCGGCGGCGGCGGCGGCGGCGGCGGCTTCGGCGGCGACTTCATGGTGCTGCGGCCGGACAAGGGCGGCATCGGCGACCTGTTCCACCTGCTGTGGTCGTGCAAGGTGGCGGAGAACGCCGCCGTGGACTGCCCCATCGGCACGGAGATCGCCGAGCGTCGGCGGCGGTGGGCGCTGTTCGTGTCGCTGGTGGCGCAGATGCTGCTGCTGTGGACGAAGAAGCCGATGGCGCTGCTCGGCGGCGGGACGGAGTACTGGATGAACCTCCTCAACGAGAATGGCGGCAGCGTCTTCATGCTCATCACCAACGCTCTGCAAGGAAAGGTGAGAATGCCAGACAAATCATCCATCAATTACCGATCATGCATTGGATTGCTTGACACAAGAATCGATCTTGACGAGAAGATCAAACCAGAGGATAGAAACTACCACGCTGCCCTGTCGATCATGGCTGCAAAACTAGCCTACGAGAACGAACTCGTCGTCAGAACTGTTGTTCAGAACCACTGGCAGATGAATTTCGTGGGCTTCTACAACTGCTGGAATGAATTCCAGGAGGACTACACGACCCAGGCGTTCATGGTGTCGGACAAGGCGGAGGACGCGAGCCTCGCCGTGGTGGCGTTCTGCGGCACGAAGCCGTTCGACACGGAGCAGTGGTGCGCCGACGTGGACTTCTCGTGGTACGAGATCCCCGGCGTCGGCAAGGTCCACGGCGGCTTCATGAAGGCGCTGGGCCTGCAGAGGAACGGCGGCTGGCCGGAGCAACCCACCGGCGCCGGAGACGACGGCGGCAGCGACAAGAAGCCGTTCGCCTACTACGTCATCCGCGAGCGGCTCAGGGCGTTCCTGGCGGAGAACCCGCGCGCCCGGTTCGTGGTCGCCGGGCACAGCCTCGGCGGCGCGCTCGCCATCCTCTTCCCGACCGTGCTGGCGCTGCACGGCGAGGAGGACATGCTGGCGAGGCTCCACGGCGTGTACACGTTCGGGCAGCCGCGCGTCGGCGACGAGGGGCTCTGCCGGTTCATGGACGGGCACCTGGCGACGCCGGTGAGCCGGTACTTCAGGTTCGTGTACTGCAACGACATCGTGCCCAGGGTGCCCTACGACGACACGGCCCTTCTGTTCAAGCACTTTGGGACGTGCCTCTACTTCGACAGCTTCTACAAAGGCCATGTGACGGAGGAGGAGCCGAACAAGAACTACTTCTCGCTGCTGACGGTGGTGCCCAAGTACGCGAACGCGGCGTGGGAGCTCGCCCGGAGCTTCGTCATCGGCTATGTCGACGGGCCGGAGTACGGTGAGGGTTGGCTGATGAGGATCGCCAGGGCCGCCGGGCTGCTGCTGCCGGGCCTGCCGCCGCACGCGCCGCAGGACTACGTGAACGCCACCAGGCTCGGCGCCGCCTCGCTCGAGCCGCTCCGATAGGTAGCTCGTCGGCGTCGGCGCCAACACATTTAGTAGTAAACTAGTAACAGGCTTGTGATTCATGATTCATGAAGTGGAATGCAACATCCACAGTGTAAATTCATGCCTTAAACACAATAATATGATTCATAAAGTGGAATGCAGCATTCATTTTCAGAATTCTTGAACAAGACAGTGTAGATTCGATGTAAATTCATGGCTTAAACACAATAATATGATGAAAATCGGTC]
[+] EMBL AK103250             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CACGACCCAGGCGTTCATGGTGTCGGACAAGGCGGAGGACGCGAGCCTCGCCGTGGTGGCGTTCTGCGGCACGAAGCCGTTCGACACGGAGCAGTGGTGCGCCGACGTGGACTTCTCGTGGTACGAGATCCCCGGCGTCGGCAAGGTCCACGGCGGCTTCATGAAGGCGCTGGGCCTGCAGAGGAACGGCGGCTGGCCGGAGCAACCCACCGGCGCCGGAGACGACGGCGGCAGCGACAAGAAGCCGTTCGCCTACTACGTCATCCGCGAGCGGCTCAGGGCGTTCCTGGCGGAGAACCCGCGCGCCCGGTTCGTGGTCGCCGGGCACAGCCTCGGCGGCGCGCTCGCCATCCTCTTCCCGACCGTGCTGGCGCTGCACGGCGAGGAGGACATGCTGGCGAGGCTCCACGGCGTGTACACGTTCGGGCAGCCGCGCGTCGGCGACGAGGGGCTCTGCCGGTTCATGGACGGGCACCTGGCGACGCCGGTGAGCCGGTACTTCAGGTTCGTGTACTGCAACGACATCGTGCCCAGGGTGCCCTACGACGACACGGCCCTTCTGTTCAAGCACTTTGGGACGTGCCTCTACTTCGACAGCTTCTACAAAGGCCATGTGACGGAGGAGGAGCCGAACAAGAACTACTTCTCGCTGCTGACGGTGGTGCCCAAGTACGCGAACGCGGCGTGGGAGCTCGCCCGGAGCTTCGTCATCGGCTATGTCGACGGGCCGGAGTACGGTGAGGGTTGGCTGATGAGGATCGCCAGGGCCGCCGGGCTGCTGCTGCCGGGCCTGCCGCCGCACGCGCCGCAGGACTACGTGAACGCCACCAGGCTCGGCGCCGCCTCGCTCGAGCCGCTCCGATAGGTAGCTCGTCGGCGTCGGCGCCAACACATTTAGTAGTAAACTAGTAACAGGCTTGTGATTCATGATTCATGAAGTGGAATGCAACATACACAGTGTAAATTCATGCCTTAAACACAATAATATGATTCATAAAGTGGAATGCAGCATTCATTTTCAGAATTCTTGAACAAGACAGTGTAGATTCGATGTAAATTCATGGCTTAAACACAATAATATGATGAAAATCGG  ]


>consensus_5729#0 GAGCTGTGTCGACGCTAGCTAAGCCAACACCAACGAAGATTCGAAGCTCGCGGTTTTCTT GGCTTTGGTCGTAAGCATCAAAAATGGCCGGAGCTGGAGAATACGGCGGCGGCGGCGGCG GCGGCGGCGGCTTCGGCGGCGACTTCATGGTGCTGCGGCCGGACAAGGGCGGCATCGGCG ACCTGTTCCACCTGCTGTGGTCGTGCAAGGTGGCGGAGAACGCCGCCGTGGACTGCCCCA TCGGCACGGAGATCGCCGAGCGTCGGCGGCGGTGGGCGCTGTTCGTGTCGCTGGTGGCGC AGATGCTGCTGCTGTGGACGAAGAAGCCGATGGCGCTGCTCGGCGGCGGGACGGAGTACT GGATGAACCTCCTCAACGAGAATGGCGGCAGCGTCTTCATGCTCATCACCAACGCTCTGC AAGGAAAGGTGAGAATGCCAGACAAATCATCCATCAATTACCGATCATGCATTGGATTGC TTGACACAAGAATCGATCTTGACGAGAAGATCAAACCAGAGGATAGAAACTACCACGCTG CCCTGTCGATCATGGCTGCAAAACTAGCCTACGAGAACGAACTCGTCGTCAGAACTGTTG TTCAGAACCACTGGCAGATGAATTTCGTGGGCTTCTACAACTGCTGGAATGAATTCCAGG AGGACTACACGACCCAGGCGTTCATGGTGTCGGACAAGGCGGAGGACGCGAGCCTCGCCG TGGTGGCGTTCTGCGGCACGAAGCCGTTCGACACGGAGCAGTGGTGCGCCGACGTGGACT TCTCGTGGTACGAGATCCCCGGCGTCGGCAAGGTCCACGGCGGCTTCATGAAGGCGCTGG GCCTGCAGAGGAACGGCGGCTGGCCGGAGCAACCCACCGGCGCCGGAGACGACGGCGGCA GCGACAAGAAGCCGTTCGCCTACTACGTCATCCGCGAGCGGCTCAGGGCGTTCCTGGCGG AGAACCCGCGCGCCCGGTTCGTGGTCGCCGGGCACAGCCTCGGCGGCGCGCTCGCCATCC TCTTCCCGACCGTGCTGGCGCTGCACGGCGAGGAGGACATGCTGGCGAGGCTCCACGGCG TGTACACGTTCGGGCAGCCGCGCGTCGGCGACGAGGGGCTCTGCCGGTTCATGGACGGGC ACCTGGCGACGCCGGTGAGCCGGTACTTCAGGTTCGTGTACTGCAACGACATCGTGCCCA GGGTGCCCTACGACGACACGGCCCTTCTGTTCAAGCACTTTGGGACGTGCCTCTACTTCG ACAGCTTCTACAAAGGCCATGTGACGGAGGAGGAGCCGAACAAGAACTACTTCTCGCTGC TGACGGTGGTGCCCAAGTACGCGAACGCGGCGTGGGAGCTCGCCCGGAGCTTCGTCATCG GCTATGTCGACGGGCCGGAGTACGGTGAGGGTTGGCTGATGAGGATCGCCAGGGCCGCCG GGCTGCTGCTGCCGGGCCTGCCGCCGCACGCGCCGCAGGACTACGTGAACGCCACCAGGC TCGGCGCCGCCTCGCTCGAGCCGCTCCGATAGGTAGCTCGTCGGCGTCGGCGCCAACACA TTTAGTAGTAAACTAGTAACAGGCTTGTGATTCATGATTCATGAAGTGGAATGCAACATC CACAGTGTAAATTCATGCCTTAAACACAATAATATGATTCATAAAGTGGAATGCAGCATT CATTTTCAGAATTCTTGAACAAGACAGTGTAGATTCGATGTAAATTCATGGCTTAAACAC AATAATATGATGAAAATCGGTC



consensusID : consensus_5729#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1718
fasta sequence
                              [CTTGTTCGATCATAAGCTCGATCTCGTGCACATCGTCGACGACGGCGACCACCGGCGGATCAATCGCCGGCGGCATGGACGACGACGACGACTGCCGGCGGCGAGATGTCACCTTGGGCGACGAATTCATGGTGCTGCAGCCGGAGAACGGCGGCGCGCGCAGCCTCGCCGACCTGCTGCTCTCCTGCAAGGTCGGCGAGAACAAGGCCGTGCGCTGCGGCCGCCCCGGCGCCGAGGTGGCGCCGCCGTGGCACCGGTGGATCATCGCCGTCTCCCTCCTCGCGCAGATGCTGCTCCGGTTGTCCAAGGGGGTCATGGCCAAGGTCGGCCGCGCCGTCGAGTACTGGATGAACCTCGTCAGCGAGAATGACAACGTCCTCGGCCTCATCAGAAATGCTCTGCATGGGAAGGTGAAAACGCCGGACAGAAATTCTCCCAACTACAGATCGTTCATTGGACTTCTTGACACAAGGATCGATCTGGACGAGAAGATCAAGCCAGGTGATAGCAATTACCACGCAGCTCTCTGCATCATGGCAGCGAAATTGGCCTACGAGAACGAACTCGTCATAAAGGACGCCGTGGAAAAGAATTGGAAGATGACCTTCTTAGAGTTCTTCAACTGTTGGAACGATTTCCAGAATGATTACACGACCCAGGCGTTCATGTTCGCCGACAAGCCGGAGGACGCCGAGCTCGTCGTGGTGGCGTTCCGCGGCACGCAGCCGTTCGACATGGAGCAGTGGAGCACCGACGTCGACATCTCGTGGTACGAGATCCCGGGTGTGGGCAAGGTCCATGGCGGCTTCATGAAGGCGCTCGGGCTGCAGAACAACGCCGCCGCCGGCAAGAAACCCAGCTGGCCGGCGGAGATCGCGCCGCCGTCGGCGGCCAAGAACTCCGAGAAGACGAAGAGCTTCGCCTACTACGCCATCCGCGCCCGCCTGCGCGCGTTCCTCGCCGCCAACCCGCGCGCCAGGCTCGTCGTGACGGGGCACAGCCTCGGCGGCGCGCTTGCCGCGCTGTTCCCGGTGGTCCTGGCGCTGCACGGCGGCGAGGCCGACGCCGCGGCGCTCGGCAGGCTGGACGGCGTGTACACCTACGGGCAGCCCCGCGTCGGCGACGCGGCGCTCGGCGAGTGGGTCGCGGCGGCGAGCTCACTGGAGGGCAAGCACCTCCGGTTCGTGTACTGCAACGACGTCGTGCCCCGGGTGCCCTACGACGACGCCGCGTTCCTGTTCAGGCACTTCGGCCGCTGCGTCTACTTCGACGCCGCATACAGGGCGAGGGCCATGGCGGAGGAGCCGAACAAGAACTACTTCTCGCCGGCGTTCGCGTTGGCCAAGCACGCGAACGCGGCGTGGGAGCTGGCGCGAGGGCTCGCCATCGGGCGCGTGGCAGGGGGGGAGTACGCGGAAGGGTGGGCGATGCGGGCGGCGAGGGTGGTGGGGCTGGTGTTCCCCGGCTTGCCGCCGCACGCGCCGCAGGACTACGTGAACGCCACCAGGCTCGCCGGCGCCTCGCTTCGCAAGCTGCTAGACTAGACAGTTAGCCCACTCTCTTGCTCTGCGACTGATGAACTGATCACCAATTCACCAGTGGAAATGAATCGAGCACGGGAACGGAACTGAATTATTTTCCGGTTCCTGTGATAGAAAGATGAAACTTTGAAAATTCATGCAAAAATTTGTGTAGTATATTCGAAATCTATGAAGCAA]

[+] EMBL AK110332             [CTTGTTCGATCATAAGCTCGATCTCGTGCACATCGTCGACGACGGCGACCACCGGCGGATCAATCGCCGGCGGCATGGACGACGACGACGACTGCCGGCGGCGAGATGTCACCTTGGGCGACGAATTCATGGTGCTGCAGCCGGAGAACGGCGGCGCGCGCAGCCTCGCCGACCTGCTGCTCTCCTGCAAGGTCGGCGAGAACAAGGCCGTGCGCTGCGGCCGCCCCGGCGCCGAGGTGGCGCCGCCGTGGCACCGGTGGATCATCGCCGTCTCCCTCCTCGCGCAGATGCTGCTCCGGTTGTCCAAGGGGGTCATGGCCAAGGTCGGCCGCGCCGTCGAGTACTGGATGAACCTCGTCAGCGAGAATGACAACGTCCTCGGCCTCATCAGAAATGCTCTGCATGGGAAGGTGAAAACGCCGGACAGAAATTCTCCCAACTACAGATCGTTCATTGGACTTCTTGACACAAGGATCGATCTGGACGAGAAGATCAAGCCAGGTGATAGCAATTACCACGCAGCTCTCTGCATCATGGCAGCGAAATTGGCCTACGAGAACGAACTCGTCATAAAGGACGCCGTGGAAAAGAATTGGAAGATGACCTTCTTAGAGTTCTTCAACTGTTGGAACGATTTCCAGAATGATTACACGACCCAGGCGTTCATGTTCGCCGACAAGCCGGAGGACGCCGAGCTCGTCGTGGTGGCGTTCCGCGGCACGCAGCCGTTCGACATGGAGCAGTGGAGCACCGACGTCGACATCTCGTGGTACGAGATCCCGGGTGTGGGCAAGGTCCATGGCGGCTTCATGAAGGCGCTCGGGCTGCAGAACAACGCCGCCGCCGGCAAGAAACCCAGCTGGCCGGCGGAGATCGCGCCGCCGTCGGCGGCCAAGAACTCCGAGAAGACGAAGAGCTTCGCCTACTACGCCATCCGCGCCCGCCTGCGCGCGTTCCTCGCCGCCAACCCGCGCGCCAGGCTCGTCGTGACGGGGCACAGCCTCGGCGGCGCGCTTGCCGCGCTGTTCCCGGTGGTCCTGGCGCTGCACGGCGGCGAGGCCGACGCCGCGGCGCTCGGCAGGCTGGACGGCGTGTACACCTACGGGCAGCCCCGCGTCGGCGACGCGGCGCTCGGCGAGTGGGTCGCGGCGGCGAGCTCACTGGAGGGCAAGCACCTCCGGTTCGTGTACTGCAACGACGTCGTGCCCCGGGTGCCCTACGACGACGCCGCGTTCCTGTTCAGGCACTTCGGCCGCTGCGTCTACTTCGACGCCGCATACAGGGCGAGGGCCATGGCGGAGGAGCCGAACAAGAACTACTTCTCGCCGGCGTTCGCGTTGGCCAAGCACGCGAACGCGGCGTGGGAGCTGGCGCGAGGGCTCGCCATCGGGCGCGTGGCAGGGGGGGAGTACGCGGAAGGGTGGGCGATGCGGGCGGCGAGGGTGGTGGGGCTGGTGTTCCCCGGCTTGCCGCCGCACGCGCCGCAGGACTACGTGAACGCCACCAGGCTCGCCGGCGCCTCGCTTCGCAAGCTGCTAGACTAGACAGTTAGCCCACTCTCTTGCTCTGCGACTGATGAACTGATCACCAATTCACCAGTGGAAATGAATCGAGCACGGGAACGGAACTGAATTATTTTCCGGTTCCTGTGATAGAAAGATGAAACTTTGAAAATTCATGCAAAAATTTGTGTAGTATATTCGAAATCTATGAAGCAA]


>consensus_5729#1 CTTGTTCGATCATAAGCTCGATCTCGTGCACATCGTCGACGACGGCGACCACCGGCGGAT CAATCGCCGGCGGCATGGACGACGACGACGACTGCCGGCGGCGAGATGTCACCTTGGGCG ACGAATTCATGGTGCTGCAGCCGGAGAACGGCGGCGCGCGCAGCCTCGCCGACCTGCTGC TCTCCTGCAAGGTCGGCGAGAACAAGGCCGTGCGCTGCGGCCGCCCCGGCGCCGAGGTGG CGCCGCCGTGGCACCGGTGGATCATCGCCGTCTCCCTCCTCGCGCAGATGCTGCTCCGGT TGTCCAAGGGGGTCATGGCCAAGGTCGGCCGCGCCGTCGAGTACTGGATGAACCTCGTCA GCGAGAATGACAACGTCCTCGGCCTCATCAGAAATGCTCTGCATGGGAAGGTGAAAACGC CGGACAGAAATTCTCCCAACTACAGATCGTTCATTGGACTTCTTGACACAAGGATCGATC TGGACGAGAAGATCAAGCCAGGTGATAGCAATTACCACGCAGCTCTCTGCATCATGGCAG CGAAATTGGCCTACGAGAACGAACTCGTCATAAAGGACGCCGTGGAAAAGAATTGGAAGA TGACCTTCTTAGAGTTCTTCAACTGTTGGAACGATTTCCAGAATGATTACACGACCCAGG CGTTCATGTTCGCCGACAAGCCGGAGGACGCCGAGCTCGTCGTGGTGGCGTTCCGCGGCA CGCAGCCGTTCGACATGGAGCAGTGGAGCACCGACGTCGACATCTCGTGGTACGAGATCC CGGGTGTGGGCAAGGTCCATGGCGGCTTCATGAAGGCGCTCGGGCTGCAGAACAACGCCG CCGCCGGCAAGAAACCCAGCTGGCCGGCGGAGATCGCGCCGCCGTCGGCGGCCAAGAACT CCGAGAAGACGAAGAGCTTCGCCTACTACGCCATCCGCGCCCGCCTGCGCGCGTTCCTCG CCGCCAACCCGCGCGCCAGGCTCGTCGTGACGGGGCACAGCCTCGGCGGCGCGCTTGCCG CGCTGTTCCCGGTGGTCCTGGCGCTGCACGGCGGCGAGGCCGACGCCGCGGCGCTCGGCA GGCTGGACGGCGTGTACACCTACGGGCAGCCCCGCGTCGGCGACGCGGCGCTCGGCGAGT GGGTCGCGGCGGCGAGCTCACTGGAGGGCAAGCACCTCCGGTTCGTGTACTGCAACGACG TCGTGCCCCGGGTGCCCTACGACGACGCCGCGTTCCTGTTCAGGCACTTCGGCCGCTGCG TCTACTTCGACGCCGCATACAGGGCGAGGGCCATGGCGGAGGAGCCGAACAAGAACTACT TCTCGCCGGCGTTCGCGTTGGCCAAGCACGCGAACGCGGCGTGGGAGCTGGCGCGAGGGC TCGCCATCGGGCGCGTGGCAGGGGGGGAGTACGCGGAAGGGTGGGCGATGCGGGCGGCGA GGGTGGTGGGGCTGGTGTTCCCCGGCTTGCCGCCGCACGCGCCGCAGGACTACGTGAACG CCACCAGGCTCGCCGGCGCCTCGCTTCGCAAGCTGCTAGACTAGACAGTTAGCCCACTCT CTTGCTCTGCGACTGATGAACTGATCACCAATTCACCAGTGGAAATGAATCGAGCACGGG AACGGAACTGAATTATTTTCCGGTTCCTGTGATAGAAAGATGAAACTTTGAAAATTCATG CAAAAATTTGTGTAGTATATTCGAAATCTATGAAGCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5729#0      GAGCTGTGTCGACGCTAGCTAAGCCAACACCAACGAAGATTCGAAGCTCGCGGTTTTC-T 59
consensus_5729#1      -----------------------CTTGTTCGATCATAAGCTCGAT-CTCGTGCACATCGT 36
                                             *     * * *  *   ****  **** *    ** *

consensus_5729#0      TGGCTTTGGTCGTAAGCATCAAA--AATGGCCGGAGCTGGAGAATACGGCGGCGGCGGC- 116
consensus_5729#1      CGACGACGGCGACCACCGGCGGATCAATCGCCGGCGGCATGGACGACGACGACGACTGCC 96
                       * *   **     * *  *  *  *** ***** *     **  *** ** ** * ** 

consensus_5729#0      GGCGGCGG--CGGCGGCTTCGGCGGCGACTTCATGGTGCTGCGGCCGGACAAGGGCGGCA 174
consensus_5729#1      GGCGGCGAGATGTCACCTTGGGCGACGAATTCATGGTGCTGCAGCCGGAGAACGGCGGCG 156
                      *******    * *  *** **** *** ************* ****** ** ****** 

consensus_5729#0      TCGGCGACCTGTTCCACCTGCTGTGGTCGTGCAAGGTGGCGGAGAACGCCGCCGTGGACT 234
consensus_5729#1      CGCGCAGCCTCGCCGACCTGCTGCTCTCCTGCAAGGTCGGCGAGAACAAGGCCGTGCGCT 216
                         **  ***   * ********   ** ******** *  ******   ******  **

consensus_5729#0      GC---CCCATCGGCACGGAGATCGCCGAGCGTCGGCGGCGGTGGGCGCTGTTCGTGTCGC 291
consensus_5729#1      GCGGCCGCCCCGGCGCCGAGGTGGCGCCGCCGTGGCACCGGTGGATCATCGCCGTCTCCC 276
                      **   * *  **** * *** * **   **   ***  ******    *   *** ** *

consensus_5729#0      TGGTGGCGCAGATGCTGCTGCTGTGGACGAAGAAGCCGATGGCGCTGCTCGGCGGCGGGA 351
consensus_5729#1      TCCTCGCGCAGATGCTGCTCCGGTTGTCCAAGGGGGTCATGGCCAAGGTCGGCCGCGCCG 336
                      *  * ************** * ** * * ***  *   *****   * ***** ***   

consensus_5729#0      CGGAGTACTGGATGAACCTCCTCAACGAGAATGGCGGCAGCGTCTTCATGCTCATCACCA 411
consensus_5729#1      TCGAGTACTGGATGAACCTCGTCAGCGAGAATGA---CAACGTCCTCGGCCTCATCAGAA 393
                        ****************** *** ********    ** **** **   *******  *

consensus_5729#0      ACGCTCTGCAAGGAAAGGTGAGAATGCCAGACAAATCATCCATCAATTACCGATCATGCA 471
consensus_5729#1      ATGCTCTGCATGGGAAGGTGAAAACGCCGGACAGAAATTCTCCCAACTACAGATCGTTCA 453
                      * ******** ** ******* ** *** **** *   **   *** *** **** * **

consensus_5729#0      TTGGATTGCTTGACACAAGAATCGATCTTGACGAGAAGATCAAACCAGAGGATAGAAACT 531
consensus_5729#1      TTGGACTTCTTGACACAAGGATCGATCTGGACGAGAAGATCAAGCCAGGTGATAGCAATT 513
                      ***** * *********** ******** ************** ****  ***** ** *

consensus_5729#0      ACCACGCTGCCCTGTCGATCATGGCTGCAAAACTAGCCTACGAGAACGAACTCGTCGTCA 591
consensus_5729#1      ACCACGCAGCTCTCTGCATCATGGCAGCGAAATTGGCCTACGAGAACGAACTCGTCATAA 573
                      ******* ** ** *  ******** ** *** * ********************* * *

consensus_5729#0      GAACTGTTGTTCAGAACCACTGGCAGATGAATTTCGTGGGCTTCTACAACTGCTGGAATG 651
consensus_5729#1      AGGACGCCGTGGAAAAGAATTGGAAGATGACCTTCTTAGAGTTCTTCAACTGTTGGAACG 633
                           *  **  * **  * *** ******  *** * *  **** ****** ***** *

consensus_5729#0      AATTCCAGGAGGACTACACGACCCAGGCGTTCATGGTGTCGGACAAGGCGGAGGACGCGA 711
consensus_5729#1      ATTTCCAGAATGATTACACGACCCAGGCGTTCATGTTCGCCGACAAGCCGGAGGACGCCG 693
                      * ****** * ** ********************* *  * ****** **********  

consensus_5729#0      GCCTCGCCGTGGTGGCGTTCTGCGGCACGAAGCCGTTCGACACGGAGCAGTGGTGCGCCG 771
consensus_5729#1      AGCTCGTCGTGGTGGCGTTCCGCGGCACGCAGCCGTTCGACATGGAGCAGTGGAGCACCG 753
                        **** ************* ******** ************ ********** ** ***

consensus_5729#0      ACGTGGACTTCTCGTGGTACGAGATCCCCGGCGTCGGCAAGGTCCACGGCGGCTTCATGA 831
consensus_5729#1      ACGTCGACATCTCGTGGTACGAGATCCCGGGTGTGGGCAAGGTCCATGGCGGCTTCATGA 813
                      **** *** ******************* ** ** *********** *************

consensus_5729#0      AGGCGCTGGGCCTGCAGAGGAACGGCG--GCTGGCCGGAG---CAACCCACCGGCGCCGG 886
consensus_5729#1      AGGCGCTCGGGCTGCAGAACAACGCCGCCGCCGGCAAGAAACCCAGCTGGCCGGCGGAGA 873
                      ******* ** *******  **** **  ** ***  **    ** *   ******  * 

consensus_5729#0      AGACGACGGCGGCAGCGAC----------AAGAAGCCG------TTCGCCTACTACGTCA 930
consensus_5729#1      TCGCGCCGCCGTCGGCGGCCAAGAACTCCGAGAAGACGAAGAGCTTCGCCTACTACGCCA 933
                         ** ** ** * *** *           ***** **      ************* **

consensus_5729#0      TCCGCGAGCGGCTCAGGGCGTTCCTGGCGGAGAACCCGCGCGCCCGGTTCGTGGTCGCCG 990
consensus_5729#1      TCCGCGCCCGCCTGCGCGCGTTCCTCGCCGCCAACCCGCGCGCCAGGCTCGTCGTGACGG 993
                      ******  ** **  * ******** ** *  ************ ** **** **  * *

consensus_5729#0      GGCACAGCCTCGGCGGCGCGCTCGCCATCCTCTTCCCGACCGTGCTGGCGCTGCACGGCG 1050
consensus_5729#1      GGCACAGCCTCGGCGGCGCGCTTGCCGCGCTGTTCCCGGTGGTCCTGGCGCTGCACGGCG 1053
                      ********************** ***   ** ******   ** ****************

consensus_5729#0      AGGAGGACA---------TGCTGGCGAGGCTCCACGGCGTGTACACGTTCGGGCAGCCGC 1101
consensus_5729#1      GCGAGGCCGACGCCGCGGCGCTCGGCAGGCTGGACGGCGTGTACACCTACGGGCAGCCCC 1113
                        **** *           *** *  *****  ************* * ********* *

consensus_5729#0      GCGTCGGCGACGAGGGGCTCTGCCGGTTCATGGACGGGCACCTGGCGACGCCGGTGAGCC 1161
consensus_5729#1      GCGTCGGCGACGCGGCGCTCGGCGAGTGGGTCGC--GGCGGCGAGCT-CACTGGAGGGCA 1170
                      ************ ** **** **  **   * *   ***  *  **  * * ** * ** 

consensus_5729#0      GGTACTTCAGGTTCGTGTACTGCAACGACATCGTGCCCAGGGTGCCCTACGACGACACGG 1221
consensus_5729#1      AGCACCTCCGGTTCGTGTACTGCAACGACGTCGTGCCCCGGGTGCCCTACGACGACGCCG 1230
                       * ** ** ******************** ******** ***************** * *

consensus_5729#0      CCCTTCTGTTCAAGCACTTTGGGACGTGCCTCTACTTCGACAGCTTCTACAAAGGCCATG 1281
consensus_5729#1      CGTTCCTGTTCAGGCACTTCGGCCGCTGCGTCTACTTCGACGCCGCATACAGGGCGAGGG 1290
                      *  * ******* ****** **    *** ***********  *   ****  *     *

consensus_5729#0      TGACGGAGGAGGAGCCGAACAAGAACTACTTCTCGCTGCTGACGGTGGTGCCCAAGTACG 1341
consensus_5729#1      CCATGGCGGAGGAGCCGAACAAGAACTACTTCTCGCCGGCGTTCGCGTTGGCCAAGCACG 1350
                        * ** ***************************** *  *   * * ** ***** ***

consensus_5729#0      CGAACGCGGCGTGGGAGCTCGCCCGGAGCTTCGTCATCGGCTATGTCGACGGGCCGGAGT 1401
consensus_5729#1      CGAACGCGGCGTGGGAGCTGGCGCGAGGGCTCGCCATCGGGCGCGTGGCAGGGGGGGAGT 1410
                      ******************* ** **  *  *** ******    ** *  ***  *****

consensus_5729#0      ACGGTGAGGGTTGGCTGATGAGGATCGCCAGGGCCGCCGGGCTGCTGCTGCCGGGCCTGC 1461
consensus_5729#1      ACGCGGAAGGGTGGGCGATGCGGGCGGCGAGGGTGGTGGGGCTGGTGTTCCCCGGCTTGC 1470
                      ***  ** ** ***  **** **   ** ****  *  ****** ** * ** *** ***

consensus_5729#0      CGCCGCACGCGCCGCAGGACTACGTGAACGCCACCAGGCTCGGCGCCGCCTCGCT---CG 1518
consensus_5729#1      CGCCGCACGCGCCGCAGGACTACGTGAACGCCACCAGGCTCGCCGGCGCCTCGCTTCGCA 1530
                      ****************************************** ** *********   * 

consensus_5729#0      AGCCGCTCCGATAGGTAGCTCGTCGGCGTCGGCGCCAACACATTTAGTAGTAAACTAGTA 1578
consensus_5729#1      AGCTGCTAGACTAGACAGTTAGCCCACTCTCTTGCTCTGCGACTGATGAACTGATCACCA 1590
                      *** ***    ***  ** * * *  *      **      * * *  *    *  *  *

consensus_5729#0      ACAGGCTTGTGATTCATGATTCATGAAGTGGAATGCAACATCCACAGTGTAAATTCATGC 1638
consensus_5729#1      ATTCACCAGTGGAA-ATGAATCGAGCACGGGAACGGAA---CTGAATTATTTTCCGGTTC 1646
                      *    *  ***    **** **  * *  **** * **   *   * * *       * *

consensus_5729#0      CTTAAACACAATAATATGATTCATAAAGTGGAATGCAGCATTCATTTTCAGAATTCTTGA 1698
consensus_5729#1      CTGTGATAGAAAGATGAAACTTTGAAAATTCA-TGCAAAAATT-TGTGTAGTATATTCGA 1704
                      **   * * **  **   * *   *** *  * ****  * *  * *  ** **  * **

consensus_5729#0      ACAAGACAGTGTAGATTCGATGTAAATTCATGGCTTAAACACAATAATATGATGAAAATC 1758
consensus_5729#1      AATCTATGAAGCAA---------------------------------------------- 1718
                      *    *    * *                                               

consensus_5729#0      GGTC 1762
consensus_5729#1      ----
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)