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Oryza sativa
cluster # 5743 cluster # 5743       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5743#0 length = 2651 sequences # 2  
consensus_5743#1 length = 1119 sequences # 1  

consensusID : consensus_5743#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2651
fasta sequence
                              [GACTTCCTCTCGGCCGCGCTAGGGACCCACGCCGCCGCCGCCGCCACGTCCGCCTTTTCCCCGCTCCGCTGCTCGCCTCCCCAGCCTCCGTCCGTGCTCCCCTAAAAGCAGGAGGCGGCCGCCGAGAAGGAGAAGGCGCCGCGAAGAGTGAGAGCGGGGGGCTAGACCTAGTGCAATCGAGCCTTCATCGGCGCCACCGCGGGCCATCGCGTGGTTAGCCGCCGGAGTCGGGGGTGGGGGGATGCCGCGGGAGCCGGCCGCCATGCGCGTCTACACGGTCTGCGACGAGTCCAAGTACCTCATCGTGCGGAACGTCCCGTCTCTCGGCTGCGGCGATGACCTCGCCAATCTCTTCGCCACCTACGGCCCAGTAGACGAGTCTGTCTCTTCCTCCTCCCACCTATACCATACCACCACCTGCCTGTGTGAATGATTTGCTTGCTTATTCAGGTGCACGCCCATGGATGCCGAGGACTGTGACCCCTACACCGACGTTTTCTTCATCAAGTTCTCGCAGGTCAGCAATGCCAGGTGAGTAACCAAAATAGTACCTTTTCTTTCAGTCCTTTTTCCTGTTCAGGAAGAACCGACGTTCACAGAATGAGTGAAAAATGTTACTAGCCACCATTAATTCCAACAATTAAATTTGTGTTTGGTAGTCTTTTCTAAGACAAATTTGTCTCCTTCTCATCCCTGTTTTGAGCTCTGTGCTTAGGATTACAGCTTTAGTTTAGTTTGTTAGCAATTGGGAACAAATCTGGACCTACTATTTGCCAAATCGCAAGTTTATTTTCTCAATGAAAGCAAGAAACGGCATTAATTGCAGGTTTGCAAAGAGGAAATTGGATGAGTCTGTATTTCTTGGCAACCGGCTGCAGGTGTCATACGCCCCTCAGTTTGAGAGTCTTCTGGACACTAAGGAGAAACTGGAAGTCAGGAGAAAGGAAGTTCTTGGCCGAATGAAATGTGTGCTTCCATGTTCTTCTTTTCCCCCTAACTCTATGCTGTTTAGCCTTCGTTGTTTCAATATGTAACCGTTTTCTTTCTACGACTACACATTGCTAGTTTATCTTGCTTGGATAGTTATATATAAATGTTTGCTTTCATTTCTCCAGCATCTTCTGGAAGACCTGAAGGGTTATCTCATCATTCTCCAGGTCAGGGATCATCTGCTGCAAACTCACACCGTCAGATGAGCTCTAATAAAAGGTTAACATATTGCGTACTACTATCAGTTTTTTTTTGTGTGTGTGTGTATGCAAACATTGCTAAGGAGAACATTGGTCATCAGTTACTCATTGATCGGCCCAGTCTTCAACTAAATTCTATCCCTGTTAACCATGCCATTTGGAATTGGAAGTTACCCTCATATCCACATCTTTATTGATATATGACATCTGGTCTGAATATTTGAAGATGGATACCCAGTCTTTATGAATAGCTTAGCAGCTAAGCTACAGTGGGTTTACCGAACAAAACTGAGATCTTTGGCACAGTAAAGTTGAAAGAAAAACCAGCAATCCTTATTCCTTAATCAAAAGACTGAGACACTTCTTCTAGCTTTGTGTTTGGTTTGCTCTTTAGATTTTATGCATCAGTTTGTATATTTCATACTCAGCACTACCATGTAGGAGTATCAACCAGGATTTGGTTTGTTCATTTTAAGGAATGAACTTCAATTATGATACAATTACATACACTCGCCTTTTATGGAATATTTTCAAACTTTATAAGTAATATTGAATGATGTGGAACTAAGATGGTAACCCAAAAGCCCATCTGGATCTTCTCTGATTAGAAGTGTAAACACTGTATATGACTTATCTAGTGAAGTTCCATTTTGCCATCTTCAGGGAATACACAAAAACACTTCATGCTTCTCAATTTGAAGATCCTCGTTTCACTCATGTATCCTCTAATAAGGTATGCAGTACAACAGTATGTATCCTCTAATAAGGTATGCGGTACTGCAAAGTAATATAATGTTTGGAATTTGGACTCTAGGTGAGAAACCAAGAGGTTATTCATTGAGAAAAAATATGGCATTAAATTAGCAGGGCATATAATGGTGTAAGCCAACTTTCTTTTCAGAAAAAGAAAAACAGAAACAGGGGAATTAATGCATTGAGTCATACATAGTACCTGGAAAGGCAAATTCTGCAATAATTTGGAATTTTGTATATCCTGCCATATTATTGAACTTAGTATTCTTACCAATTTGTGGAGAAAATACTTCTCTGTAGGATTATTTTCCATCTGAGTCGATGAATGCAACAGTAAACCTAGTCAGGGAGAAGCTTGATAAGATACAATCCAGCAGCGACAATTCCAGTGCTATAGTTGCACCCAAGAAACCAAGGACCGATAACCGTAGACGAATTTGATATCATGGGATGGAGTAGAACATGCATTTTTTTTTCTTCATCTACTTTCTTGTAGTTTGTTTTATAATTGGCAGAAAATAGTGTACTATAATGCTAAATGCTGTCTATATTCTCCCTCAGTTGTAAAAGTATCCCCTTTTAGGTTTTCTGCGGAAGTAACGTTAGTATCATGTTTTGACGTGGATTAATGTCATGTTTGATGAGCACATTTCTCTTCGTGAAAAGTCCACCTTTCTTTTGAACAATTTATATTTGAAACATCATGTT]

[+] EMBL AK103456             [GACTTCCTCTCGGCCGCGCTAGGGACCCACGCCGCCGCCGCCGCCACGTCCGCCTTTTCCCCGCTCCGCTGCTCGCCTCCCCAGCCTCCGTCCGTGCTCCCCTAAAAGCAGGAGGCGGCCGCCGAGAAGGAGAAGGCGCCGCGAAGAGTGAGAGCGGGGGGCTAGACCTAGTGCAATCGAGCCTTCATCGGCGCCACCGCGGGCCATCGCGTGGTTAGCCGCCGGAGTCGGGGGTGGGGGGATGCCGCGGGAGCCGGCCGCCATGCGCGTCTACACGGTCTGCGACGAGTCCAAGTACCTCATCGTGCGGAACGTCCCGTCTCTCGGCTGCGGCGATGACCTCGCCAATCTCTTCGCCACCTACGGCCCAGTAGACGAGTCTGTCTCTTCCTCCTCCCACCTATACCATACCACCACCTGCCTGTGTGAATGATTTGCTTGCTTATTCAGGTGCACGCCCATGGATGCCGAGGACTGTGACCCCTACACCGACGTTTTCTTCATCAAGTTCTCGCAGGTCAGCAATGCCAGGTGAGTAACCAAAATAGTACCTTTTCTTTCAGTCCTTTTTCCTGTTCAGGAAGAACCGACGTTCACAGAATGAGTGAAAAATGTTACTAGCCACCATTAATTCCAACAATTAAATTTGTGTTTGGTAGTCTTTTCTAAGACAAATTTGTCTCCTTCTCATCCCTGTTTTGAGCTCTGTGCTTAGGATTACAGCTTTAGTTTAGTTTGTTAGCAATTGGGAACAAATCTGGACCTACTATTTGCCAAATCGCAAGTTTATTTTCTCAATGAAAGCAAGAAACGGCATTAATTGCAGGTTTGCAAAGAGGAAATTGGATGAGTCTGTATTTCTTGGCAACCGGCTGCAGGTGTCATACGCCCCTCAGTTTGAGAGTCTTCTGGACACTAAGGAGAAACTGGAAGTCAGGAGAAAGGAAGTTCTTGGCCGAATGAAATGTGTGCTTCCATGTTCTTCTTTTCCCCCTAACTCTATGCTGTTTAGCCTTCGTTGTTTCAATATGTAACCGTTTTCTTTCTACGACTACACATTGCTAGTTTATCTTGCTTGGATAGTTATATATAAATGTTTGCTTTCATTTCTCCAGCATCTTCTGGAAGACCTGAAGGGTTATCTCATCATTCTCCAGGTCAGGGATCATCTGCTGCAAACTCACACCGTCAGATGAGCTCTAATAAAAGGTTAACATATTGCGTACTACTATCAGTTTTTTTTTGTGTGTGTGTGTATGCAAACATTGCTAAGGAGAACATTGGTCATCAGTTACTCATTGATCGGCCCAGTCTTCAACTAAATTCTATCCCTGTTAACCATGCCATTTGGAATTGGAAGTTACCCTCATATCCACATCTTTATTGATATATGACATCTGGTCTGAATATTTGAAGATGGATACCCAGTCTTTATGAATAGCTTAGCAGCTAAGCTACAGTGGGTTTACCGAACAAAACTGAGATCTTTGGCACAGTAAAGTTGAAAGAAAAACCAGCAATCCTTATTCCTTAATCAAAAGACTGAGACACTTCTTCTAGCTTTGTGTTTGGTTTGCTCTTTAGATTTTATGCATCAGTTTGTATATTTCATACTCAGCACTACCATGTAGGAGTATCAACCAGGATTTGGTTTGTTCATTTTAAGGAATGAACTTCAATTATGATACAATTACATACACTCGCCTTTTATGGAATATTTTCAAACTTTATAAGTAATATTGAATGATGTGGAACTAAGATGGTAACCCAAAAGCCCATCTGGATCTTCTCTGATTAGAAGTGTAAACACTGTATATGACTTATCTAGTGAAGTTCCATTTTGCCATCTTCAGGGAATACACAAAAACACTTCATGCTTCTCAATTTGAAGATCCTCGTTTCACTCATGTATCCTCTAATAAGGTATGCAGTACAACAGTATGTATCCTCTAATAAGGTATGCGGTACTGCAAAGTAATATAATGTTTGGAATTTGGACTCTAGGTGAGAAACCAAGAGGTTATTCATTGAGAAAAAATATGGCATTAAATTAGCAGGGCATATAATGGTGTAAGCCAACTTTCTTTTCAGAAAAAGAAAAACAGAAACAGGGGAATTAATGCATTGAGTCATACATAGTACCTGGAAAGGCAAATTCTGCAATAATTTGGAATTTTGTATATCCTGCCATATTATTGAACTTAGTATTCTTACCAATTTGTGGAGAAAATACTTCTCTGTAGGATTATTTTCCATCTGAGTCGATGAATGCAACAGTAAACCTAGTCAGGGAGAAGCTTGATAAGATACAATCCAGCAGCGACAATTCCAGTGCTATAGTTGCACCCAAGAAACCAAGGACCGATAACCGTAGACGAATTTGATATCATGGGATGGAGTAGAACATGCATTTTTTTTTCTTCATCTACTTTCTTGTAGTTTGTTTTATAATTGGCAGAAAATAGTGTACTATAATGCTAAATGCTGTCTATATTCTCCCTCAGTTGTAAAAGTATCCCCTTTTAGGTTTTCTGCGGAAGTAACGTTAGTATCATGTTTTGACGTGGATTAATGTCATGTTTGATGAGCACATTTCTCTTCGTGAAAAGTCCACCTTTCTTTTGAACAATTTATATTTGAAACATCATGTT]
[-] EMBL AU225566             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTGCCATATTATTGAACTTAGTATTCTTACCAATTTGTGGAGAATATACTTCTCTGTAGGATTATTTTCCATCTGAGTCGATGAATGCAACAGTAAACCTAGTCAGGGAGAAGCTTGATAAGATACAATCCAGCAGCGACAATTCCAGTGCTATAGTTGCACCCAAGAAACCAAGGACCGATAACCGTAGACGAATTTGATATCATGGGATGGAGTAGAACATGCA TTTTTTTTCTTCATCTACTTTCTTGTAGTTTGTTTTATAATTGGCAGAAAATAGTGTACTATAATGCTAAATGCTGTCTATATTCTCCCTCAGTTGTAAAAGTATCCCCTTTTAGGTTTTCTGCGGAAGTAACGTTAGTATCATGTTTTGACGTGGATTAATGTCATGTTTGATGAGCggc                                                           ]


>consensus_5743#0 GACTTCCTCTCGGCCGCGCTAGGGACCCACGCCGCCGCCGCCGCCACGTCCGCCTTTTCC CCGCTCCGCTGCTCGCCTCCCCAGCCTCCGTCCGTGCTCCCCTAAAAGCAGGAGGCGGCC GCCGAGAAGGAGAAGGCGCCGCGAAGAGTGAGAGCGGGGGGCTAGACCTAGTGCAATCGA GCCTTCATCGGCGCCACCGCGGGCCATCGCGTGGTTAGCCGCCGGAGTCGGGGGTGGGGG GATGCCGCGGGAGCCGGCCGCCATGCGCGTCTACACGGTCTGCGACGAGTCCAAGTACCT CATCGTGCGGAACGTCCCGTCTCTCGGCTGCGGCGATGACCTCGCCAATCTCTTCGCCAC CTACGGCCCAGTAGACGAGTCTGTCTCTTCCTCCTCCCACCTATACCATACCACCACCTG CCTGTGTGAATGATTTGCTTGCTTATTCAGGTGCACGCCCATGGATGCCGAGGACTGTGA CCCCTACACCGACGTTTTCTTCATCAAGTTCTCGCAGGTCAGCAATGCCAGGTGAGTAAC CAAAATAGTACCTTTTCTTTCAGTCCTTTTTCCTGTTCAGGAAGAACCGACGTTCACAGA ATGAGTGAAAAATGTTACTAGCCACCATTAATTCCAACAATTAAATTTGTGTTTGGTAGT CTTTTCTAAGACAAATTTGTCTCCTTCTCATCCCTGTTTTGAGCTCTGTGCTTAGGATTA CAGCTTTAGTTTAGTTTGTTAGCAATTGGGAACAAATCTGGACCTACTATTTGCCAAATC GCAAGTTTATTTTCTCAATGAAAGCAAGAAACGGCATTAATTGCAGGTTTGCAAAGAGGA AATTGGATGAGTCTGTATTTCTTGGCAACCGGCTGCAGGTGTCATACGCCCCTCAGTTTG AGAGTCTTCTGGACACTAAGGAGAAACTGGAAGTCAGGAGAAAGGAAGTTCTTGGCCGAA TGAAATGTGTGCTTCCATGTTCTTCTTTTCCCCCTAACTCTATGCTGTTTAGCCTTCGTT GTTTCAATATGTAACCGTTTTCTTTCTACGACTACACATTGCTAGTTTATCTTGCTTGGA TAGTTATATATAAATGTTTGCTTTCATTTCTCCAGCATCTTCTGGAAGACCTGAAGGGTT ATCTCATCATTCTCCAGGTCAGGGATCATCTGCTGCAAACTCACACCGTCAGATGAGCTC TAATAAAAGGTTAACATATTGCGTACTACTATCAGTTTTTTTTTGTGTGTGTGTGTATGC AAACATTGCTAAGGAGAACATTGGTCATCAGTTACTCATTGATCGGCCCAGTCTTCAACT AAATTCTATCCCTGTTAACCATGCCATTTGGAATTGGAAGTTACCCTCATATCCACATCT TTATTGATATATGACATCTGGTCTGAATATTTGAAGATGGATACCCAGTCTTTATGAATA GCTTAGCAGCTAAGCTACAGTGGGTTTACCGAACAAAACTGAGATCTTTGGCACAGTAAA GTTGAAAGAAAAACCAGCAATCCTTATTCCTTAATCAAAAGACTGAGACACTTCTTCTAG CTTTGTGTTTGGTTTGCTCTTTAGATTTTATGCATCAGTTTGTATATTTCATACTCAGCA CTACCATGTAGGAGTATCAACCAGGATTTGGTTTGTTCATTTTAAGGAATGAACTTCAAT TATGATACAATTACATACACTCGCCTTTTATGGAATATTTTCAAACTTTATAAGTAATAT TGAATGATGTGGAACTAAGATGGTAACCCAAAAGCCCATCTGGATCTTCTCTGATTAGAA GTGTAAACACTGTATATGACTTATCTAGTGAAGTTCCATTTTGCCATCTTCAGGGAATAC ACAAAAACACTTCATGCTTCTCAATTTGAAGATCCTCGTTTCACTCATGTATCCTCTAAT AAGGTATGCAGTACAACAGTATGTATCCTCTAATAAGGTATGCGGTACTGCAAAGTAATA TAATGTTTGGAATTTGGACTCTAGGTGAGAAACCAAGAGGTTATTCATTGAGAAAAAATA TGGCATTAAATTAGCAGGGCATATAATGGTGTAAGCCAACTTTCTTTTCAGAAAAAGAAA AACAGAAACAGGGGAATTAATGCATTGAGTCATACATAGTACCTGGAAAGGCAAATTCTG CAATAATTTGGAATTTTGTATATCCTGCCATATTATTGAACTTAGTATTCTTACCAATTT GTGGAGAAAATACTTCTCTGTAGGATTATTTTCCATCTGAGTCGATGAATGCAACAGTAA ACCTAGTCAGGGAGAAGCTTGATAAGATACAATCCAGCAGCGACAATTCCAGTGCTATAG TTGCACCCAAGAAACCAAGGACCGATAACCGTAGACGAATTTGATATCATGGGATGGAGT AGAACATGCATTTTTTTTTCTTCATCTACTTTCTTGTAGTTTGTTTTATAATTGGCAGAA AATAGTGTACTATAATGCTAAATGCTGTCTATATTCTCCCTCAGTTGTAAAAGTATCCCC TTTTAGGTTTTCTGCGGAAGTAACGTTAGTATCATGTTTTGACGTGGATTAATGTCATGT TTGATGAGCACATTTCTCTTCGTGAAAAGTCCACCTTTCTTTTGAACAATTTATATTTGA AACATCATGTT



consensusID : consensus_5743#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1119
fasta sequence
                              [TGTCGACTTCCTCTCGGCCGCGCTAGGGACCCACGCCGCCGCCGCCGCCACGTCCGCCTTTTCCCCGCTCCGCTGCTCGCCTCCCCAGCCTCCGTCCGTGCTCCCCTAAAAGCAGGAGGCGGCCGCCGAGAAGGAGAAGGCGCCGCGAAGAGTGAGAGCGGGGGGCTAGACCTAGTGCAATCGAGCCTTCATCGGCGCCACCGCGGGCCATCGCGTGGTTAGCCGCCGGAGTCGGGGGTGGGGGGGATGCCGCGGGAGCCGGCCGCCATGCGCGTCTACACGGTCTGCGACGAGTCCAAGTACCTCATCGTGCGGAACGTCCCGTCTCTCGGCTGCGGCGATGACCTCGCCAATCTCTTCGCCACCTACGGCCCAGTAGACGAGTGCACGCCCATGGATGCCGAGGACTGTGACCCCTACACCGACGTTTTCTTCATCAAGTTCTCGCAGGTCAGCAATGCCAGGTTTGCAAAGAGGAAATTGGATGAGTCTGTATTTCTTGGCAACCGGCTGCAGGTGTCATACGCCCCTCAGTTTGAGAGTCTTCTGGACACTAAGGAGAAACTGGAAGTCAGGAGAAAGGAAGTTCTTGGCCGAATGAAATCATCTTCTGGAAGACCTGAAGGGTTATCTCATCATTCTCCAGGTCAGGGATCATCTGCTGCAAACTCACACCGTCAGATGAGCTCTAATAAAAGGGAATACACAAAAACACTTCATGCTTCTCAATTTGAAGATCCTCGTTTCACTCATGTATCCTCTAATAAGGATTATTTTCCATCTGAGTCGATGAATGCAACAGTAAACCTAGTCAGGGAGAAGCTTGATAAGATACAATCCAGCAGCGACAATTCCAGTGCTATAGTTGCACCCAAGAAACCAAGGACCGATAACCGTAGACGAATTTGATATCATGGGATGGAGTAGAACATGCATTTTTTTTTCTTCATCTACTTTCTTGTAGTTTGTTTTATAATTGGCAGAAAATAGTGTACTATAATGCTAAATGCTGTCTATATTCTCCCTCAGTTGTAAAAGTATCCCCTTTTAGGTTTTCTGCGGAAGTAACGTTAGTATCATGTTTTGACGTGGATTAATGTCATGTTTGATGAGCACATT]

[+] EMBL AK060064             [TGTCGACTTCCTCTCGGCCGCGCTAGGGACCCACGCCGCCGCCGCCGCCACGTCCGCCTTTTCCCCGCTCCGCTGCTCGCCTCCCCAGCCTCCGTCCGTGCTCCCCTAAAAGCAGGAGGCGGCCGCCGAGAAGGAGAAGGCGCCGCGAAGAGTGAGAGCGGGGGGCTAGACCTAGTGCAATCGAGCCTTCATCGGCGCCACCGCGGGCCATCGCGTGGTTAGCCGCCGGAGTCGGGGGTGGGGGGGATGCCGCGGGAGCCGGCCGCCATGCGCGTCTACACGGTCTGCGACGAGTCCAAGTACCTCATCGTGCGGAACGTCCCGTCTCTCGGCTGCGGCGATGACCTCGCCAATCTCTTCGCCACCTACGGCCCAGTAGACGAGTGCACGCCCATGGATGCCGAGGACTGTGACCCCTACACCGACGTTTTCTTCATCAAGTTCTCGCAGGTCAGCAATGCCAGGTTTGCAAAGAGGAAATTGGATGAGTCTGTATTTCTTGGCAACCGGCTGCAGGTGTCATACGCCCCTCAGTTTGAGAGTCTTCTGGACACTAAGGAGAAACTGGAAGTCAGGAGAAAGGAAGTTCTTGGCCGAATGAAATCATCTTCTGGAAGACCTGAAGGGTTATCTCATCATTCTCCAGGTCAGGGATCATCTGCTGCAAACTCACACCGTCAGATGAGCTCTAATAAAAGGGAATACACAAAAACACTTCATGCTTCTCAATTTGAAGATCCTCGTTTCACTCATGTATCCTCTAATAAGGATTATTTTCCATCTGAGTCGATGAATGCAACAGTAAACCTAGTCAGGGAGAAGCTTGATAAGATACAATCCAGCAGCGACAATTCCAGTGCTATAGTTGCACCCAAGAAACCAAGGACCGATAACCGTAGACGAATTTGATATCATGGGATGGAGTAGAACATGCATTTTTTTTTCTTCATCTACTTTCTTGTAGTTTGTTTTATAATTGGCAGAAAATAGTGTACTATAATGCTAAATGCTGTCTATATTCTCCCTCAGTTGTAAAAGTATCCCCTTTTAGGTTTTCTGCGGAAGTAACGTTAGTATCATGTTTTGACGTGGATTAATGTCATGTTTGATGAGCACATT]


>consensus_5743#1 TGTCGACTTCCTCTCGGCCGCGCTAGGGACCCACGCCGCCGCCGCCGCCACGTCCGCCTT TTCCCCGCTCCGCTGCTCGCCTCCCCAGCCTCCGTCCGTGCTCCCCTAAAAGCAGGAGGC GGCCGCCGAGAAGGAGAAGGCGCCGCGAAGAGTGAGAGCGGGGGGCTAGACCTAGTGCAA TCGAGCCTTCATCGGCGCCACCGCGGGCCATCGCGTGGTTAGCCGCCGGAGTCGGGGGTG GGGGGGATGCCGCGGGAGCCGGCCGCCATGCGCGTCTACACGGTCTGCGACGAGTCCAAG TACCTCATCGTGCGGAACGTCCCGTCTCTCGGCTGCGGCGATGACCTCGCCAATCTCTTC GCCACCTACGGCCCAGTAGACGAGTGCACGCCCATGGATGCCGAGGACTGTGACCCCTAC ACCGACGTTTTCTTCATCAAGTTCTCGCAGGTCAGCAATGCCAGGTTTGCAAAGAGGAAA TTGGATGAGTCTGTATTTCTTGGCAACCGGCTGCAGGTGTCATACGCCCCTCAGTTTGAG AGTCTTCTGGACACTAAGGAGAAACTGGAAGTCAGGAGAAAGGAAGTTCTTGGCCGAATG AAATCATCTTCTGGAAGACCTGAAGGGTTATCTCATCATTCTCCAGGTCAGGGATCATCT GCTGCAAACTCACACCGTCAGATGAGCTCTAATAAAAGGGAATACACAAAAACACTTCAT GCTTCTCAATTTGAAGATCCTCGTTTCACTCATGTATCCTCTAATAAGGATTATTTTCCA TCTGAGTCGATGAATGCAACAGTAAACCTAGTCAGGGAGAAGCTTGATAAGATACAATCC AGCAGCGACAATTCCAGTGCTATAGTTGCACCCAAGAAACCAAGGACCGATAACCGTAGA CGAATTTGATATCATGGGATGGAGTAGAACATGCATTTTTTTTTCTTCATCTACTTTCTT GTAGTTTGTTTTATAATTGGCAGAAAATAGTGTACTATAATGCTAAATGCTGTCTATATT CTCCCTCAGTTGTAAAAGTATCCCCTTTTAGGTTTTCTGCGGAAGTAACGTTAGTATCAT GTTTTGACGTGGATTAATGTCATGTTTGATGAGCACATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5743#0      ----GACTTCCTCTCGGCCGCGCTAGGGACCCACGCCGCCGCCGCCGCCACGTCCGCCTT 56
consensus_5743#1      TGTCGACTTCCTCTCGGCCGCGCTAGGGACCCACGCCGCCGCCGCCGCCACGTCCGCCTT 60
                          ********************************************************

consensus_5743#0      TTCCCCGCTCCGCTGCTCGCCTCCCCAGCCTCCGTCCGTGCTCCCCTAAAAGCAGGAGGC 116
consensus_5743#1      TTCCCCGCTCCGCTGCTCGCCTCCCCAGCCTCCGTCCGTGCTCCCCTAAAAGCAGGAGGC 120
                      ************************************************************

consensus_5743#0      GGCCGCCGAGAAGGAGAAGGCGCCGCGAAGAGTGAGAGCGGGGGGCTAGACCTAGTGCAA 176
consensus_5743#1      GGCCGCCGAGAAGGAGAAGGCGCCGCGAAGAGTGAGAGCGGGGGGCTAGACCTAGTGCAA 180
                      ************************************************************

consensus_5743#0      TCGAGCCTTCATCGGCGCCACCGCGGGCCATCGCGTGGTTAGCCGCCGGAGTCGGGGGTG 236
consensus_5743#1      TCGAGCCTTCATCGGCGCCACCGCGGGCCATCGCGTGGTTAGCCGCCGGAGTCGGGGGTG 240
                      ************************************************************

consensus_5743#0      GGGGG-ATGCCGCGGGAGCCGGCCGCCATGCGCGTCTACACGGTCTGCGACGAGTCCAAG 295
consensus_5743#1      GGGGGGATGCCGCGGGAGCCGGCCGCCATGCGCGTCTACACGGTCTGCGACGAGTCCAAG 300
                      ***** ******************************************************

consensus_5743#0      TACCTCATCGTGCGGAACGTCCCGTCTCTCGGCTGCGGCGATGACCTCGCCAATCTCTTC 355
consensus_5743#1      TACCTCATCGTGCGGAACGTCCCGTCTCTCGGCTGCGGCGATGACCTCGCCAATCTCTTC 360
                      ************************************************************

consensus_5743#0      GCCACCTACGGCCCAGTAGACGAGTCTGTCTCTTCCTCCTCCCACCTATACCATACCACC 415
consensus_5743#1      GCCACCTACGGCCCAGTAGACGAGT----------------------------------- 385
                      *************************                                   

consensus_5743#0      ACCTGCCTGTGTGAATGATTTGCTTGCTTATTCAGGTGCACGCCCATGGATGCCGAGGAC 475
consensus_5743#1      -------------------------------------GCACGCCCATGGATGCCGAGGAC 408
                                                           ***********************

consensus_5743#0      TGTGACCCCTACACCGACGTTTTCTTCATCAAGTTCTCGCAGGTCAGCAATGCCAGGTGA 535
consensus_5743#1      TGTGACCCCTACACCGACGTTTTCTTCATCAAGTTCTCGCAGGTCAGCAATGCCAGGTTT 468
                      **********************************************************  

consensus_5743#0      GTAACCAAAATAGTACCTTTTCTTTCAGTCCTTTTTCCTGTTCAGGAAGAACCG-ACGTT 594
consensus_5743#1      GCAAAGAGGAAATTGGATGAGTCTGTATTTCTTGGCAACCGGCTGCAGGTGTCATACGCC 528
                      * **  *  * * *   *     *  * * ***         * * * *   *  ***  

consensus_5743#0      CA-CAGAATGAGTGAA----AAATGTTACTAGCCACCATTAATTCC--AACAATTAAATT 647
consensus_5743#1      CCTCAGTTTGAGAGTCTTCTGGACACTAAGGAGAAACTGGAAGTCAGGAGAAAGGAAGTT 588
                      *  ***  **** *        *   **      * *   ** **   *  **  ** **

consensus_5743#0      TGTGTTTGG------TAGTCTTTTCTAAGAC----AAATTTGTCTCCTTCTCATCCCTGT 697
consensus_5743#1      CTTGGCCGAATGAAATCATCTTCTGGAAGACCTGAAGGGTTATCTCATCATTCTCCAGGT 648
                        **   *       *  **** *  *****    *   ** **** *  *  ***  **

consensus_5743#0      TTTGAGCTCTGTGCT-TAGGATTACAGCTTTAGTTTAGTTTGTTAGCAATTGGGAACAAA 756
consensus_5743#1      CAGGGATCATCTGCTGCAAACTCACACCGTCAGATGAGCT--CTAATAAAAGGGAATACA 706
                         *     * ****  *   * *** * * ** * ** *   **  **  ***** * *

consensus_5743#0      TCTGGACCTACTAT--TTGCCAAATCGCAAGT--TTATTTTCTCAATGAAAGCAAGAAAC 812
consensus_5743#1      CAAAAACACTTCATGCTTCTCAATTTGAAGATCCTCGTTTCACTCATGTATCCTCTAATA 766
                           **     **  **  *** * * *  *  *  ***     *** *  *   **  

consensus_5743#0      GGCATTAATTGCAGGTTTGCAAAGAGGAAATTGGATGAGTCTGTATTTCTTGGCAACCGG 872
consensus_5743#1      AGGATTATTTTCCA-TCTGAGTCGATGAATGCAACAGTAAACCTAGTCAGGGAGAAGCTT 825
                       * **** ** *   * **    ** ***       *      ** *    *  ** *  

consensus_5743#0      CTGCAGGTGTCATACGCC--CCTCAGTTTGAGAGTCTTCTGGACACTAAGGAGAAACTGG 930
consensus_5743#1      GATAAGATACAATCCAGCAGCGACAATTCCAGTGCTATAGTTGCACCCAAGA-AACCAAG 884
                          ** *   ** *  *  *  ** **  ** *   *     ***  * ** ** *  *

consensus_5743#0      AAGTCAGGAGAAAGGAAGTTCTTGGCCGAATGAAATGTGTGCTTCCATGTTCTTCTTTTC 990
consensus_5743#1      GACCGATAACCGTAGACGAATTTGATATCATGGGATGGAGTAGAACATGCATTTTTTTTT 944
                       *   *  *     ** *   ***     ***  ***        ****   ** **** 

consensus_5743#0      CCCCTAACTCTATGCTGTTTAGCCTTCGTTGTTTCAATATGTAACCGTTTTCTTTCTACG 1050
consensus_5743#1      CTTCA---TCTAC-TTTCTTGTAGTTTGTT-TTATAATTGGCAGAAAATAGTGTACTATA 999
                      *  *    ****   *  **    ** *** **  ***  * *     *    * ***  

consensus_5743#0      ACTACACATTGCTAGTTTATCTTGCTTGGATAGTTATATATAAATGTTTGCTTTCATTTC 1110
consensus_5743#1      A-TGCTAAATGCT-GTCTATATT-CTCCCTCAGTTGTAA--AAGTATCCCCTTTTAGGTT 1054
                      * * *  * **** ** *** ** **     **** **   ** * *   **** *  * 

consensus_5743#0      TCCAGCATCTTCTGGAAGACCTGAAGGGTTATCTCATCATTCTCCAGGTCAGGGATCATC 1170
consensus_5743#1      TTCTGC-------GGAAGTAACGTTAG--TATCATGTTTTGACGTGGATTAATG-TCATG 1104
                      * * **       *****    *   *  ****   *  *      * * *  * **** 

consensus_5743#0      TGCTGCAAACTCACACCGTCAGATGAGCTCTAATAAAAGGTTAACATATTGCGTACTACT 1230
consensus_5743#1      TTTGATGAGCACATT--------------------------------------------- 1119
                      *      * * **                                               

consensus_5743#0      ATCAGTTTTTTTTTGTGTGTGTGTGTATGCAAACATTGCTAAGGAGAACATTGGTCATCA 1290
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      GTTACTCATTGATCGGCCCAGTCTTCAACTAAATTCTATCCCTGTTAACCATGCCATTTG 1350
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      GAATTGGAAGTTACCCTCATATCCACATCTTTATTGATATATGACATCTGGTCTGAATAT 1410
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      TTGAAGATGGATACCCAGTCTTTATGAATAGCTTAGCAGCTAAGCTACAGTGGGTTTACC 1470
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      GAACAAAACTGAGATCTTTGGCACAGTAAAGTTGAAAGAAAAACCAGCAATCCTTATTCC 1530
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      TTAATCAAAAGACTGAGACACTTCTTCTAGCTTTGTGTTTGGTTTGCTCTTTAGATTTTA 1590
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      TGCATCAGTTTGTATATTTCATACTCAGCACTACCATGTAGGAGTATCAACCAGGATTTG 1650
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      GTTTGTTCATTTTAAGGAATGAACTTCAATTATGATACAATTACATACACTCGCCTTTTA 1710
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      TGGAATATTTTCAAACTTTATAAGTAATATTGAATGATGTGGAACTAAGATGGTAACCCA 1770
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      AAAGCCCATCTGGATCTTCTCTGATTAGAAGTGTAAACACTGTATATGACTTATCTAGTG 1830
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      AAGTTCCATTTTGCCATCTTCAGGGAATACACAAAAACACTTCATGCTTCTCAATTTGAA 1890
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      GATCCTCGTTTCACTCATGTATCCTCTAATAAGGTATGCAGTACAACAGTATGTATCCTC 1950
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      TAATAAGGTATGCGGTACTGCAAAGTAATATAATGTTTGGAATTTGGACTCTAGGTGAGA 2010
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      AACCAAGAGGTTATTCATTGAGAAAAAATATGGCATTAAATTAGCAGGGCATATAATGGT 2070
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      GTAAGCCAACTTTCTTTTCAGAAAAAGAAAAACAGAAACAGGGGAATTAATGCATTGAGT 2130
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      CATACATAGTACCTGGAAAGGCAAATTCTGCAATAATTTGGAATTTTGTATATCCTGCCA 2190
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      TATTATTGAACTTAGTATTCTTACCAATTTGTGGAGAAAATACTTCTCTGTAGGATTATT 2250
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      TTCCATCTGAGTCGATGAATGCAACAGTAAACCTAGTCAGGGAGAAGCTTGATAAGATAC 2310
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      AATCCAGCAGCGACAATTCCAGTGCTATAGTTGCACCCAAGAAACCAAGGACCGATAACC 2370
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      GTAGACGAATTTGATATCATGGGATGGAGTAGAACATGCATTTTTTTTTCTTCATCTACT 2430
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      TTCTTGTAGTTTGTTTTATAATTGGCAGAAAATAGTGTACTATAATGCTAAATGCTGTCT 2490
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      ATATTCTCCCTCAGTTGTAAAAGTATCCCCTTTTAGGTTTTCTGCGGAAGTAACGTTAGT 2550
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      ATCATGTTTTGACGTGGATTAATGTCATGTTTGATGAGCACATTTCTCTTCGTGAAAAGT 2610
consensus_5743#1      ------------------------------------------------------------
                                                                                  

consensus_5743#0      CCACCTTTCTTTTGAACAATTTATATTTGAAACATCATGTT 2651
consensus_5743#1      -----------------------------------------
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)