cluster # 5756

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Oryza sativa
cluster # 5756 cluster # 5756 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5756#0 length = 561 sequences # 3

consensusID : consensus_5756#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 561
fasta sequence

                              [TTCCACCACGTCCGCGCGTGGAGCCACGAGAGCTTGCC-GGCGGCGGCCTCCTCCGGGTTCATCGCATGGACGCTCACCCTGCTCGCCATGGGATTGGCCGTCAAGGAGATTGACCTGCACGGCAGGAACGCCAGATTGAAAACCATGGAGTCCTTCACCATCATACTCTCGGCAACACAGCTGTTTTATCTGCTCGCCATTCACGGCGGGAGGTA-GAAGAAGGTCAGGTTTTTCTGATTAAAGTTGTGAAGGTGAAGACACCTTTGTG-AGCATTATTGGGCATAGATCATGGACTTTACGAGCCTAATTTGATTTCACCGGTTTGTG-AGATTAAGTTCGACATGGATCAACCAGATCGAGGCGCTGTTTGTGCTTGTCTACGAATACGTGTGTGTGTGTGTGTGTGTGTTTTATGCAGTGTGTGACTAGCACTTCTTAGTAATTCGTGTGCCGAATACTCGAACTCCTGTGTGATTTGTTGATTATTTGGATGCGTTGATTTATACTGTATTGATTTCGCCGTGTCTGGTTAATCGATTTGATTATGTGGACGTGATGGTT]

[+] EMBL AK067766             [TTCCACCACGTCCGCGCGTGGAGCCACGAGAGCTTGCC GGCGGCGGCCTCCTCCGGGTTCATCGCATGGACGCTCACCCTGCTCGCCATGGGATTGGCCGTCAAGGAGATTGACCTGCACGGCAGGAACGCCAGATTGAAAACCATGGAGTCCTTCACCATCATACTCTCGGCAACACAGCTGTTTTATCTGCTCGCCATTCACGGCGGGAGGTA GAAGAAGGTCAGGTTTTTCTGATTAAAGTTGTGAAGGTGAAGACACCTTTGTG AGCATTATTGGGCATAGATCATGGACTTTACGAGCCTAATTTGATTTCACCGGTTTGTG AGATTAAGTTCGACATGGATCAACCAGATCGAGGCGCTGTTTGTGCTTGTCTACGAATACGTGTGTGTGTGTGTGTGTGTGTTTTATGCAGTGTGTGACTAGCACTTCTTAGTAATTCGTGTGCCGAATACTCGAACTCCTGTGTGATTTGTTGATTATTTGGATGCGTTGATTTATACTGTATTGATTTCGCCGTGTCTGGTTAATCGATTTGATTATGTGGACGTGATGGTT]
[+] EMBL AU101688             [TTCCACCACGTCCGCGCGTGGANCCACGAGAGCTTGCC GGCGGCGGCCTCCTCCGGGTTCATCGCATGGACGCTCACCCTGCTCGCCATGGGATTGGCCGTCAAGGAGATTGACCTGCACGGCAGGAACGCCAGATTGAAAACCATGGAGTCCTTCACCATCATACTCTCGGCAACACAGCTGTTTTATCTGCTCGCCATTCACGGCGGGAGGTA GAAGAAGGTCAGGTTTTTCTGATTAAAGTTGTGAAGGTGAAGACACCTTTGTG AGCATTATTGGGCATAGATCATGGACTTTACGAGCCTAATTTGATTTCACCGGTTTGTG AGATTAAGTTCGACATGGATCAACCAGATCGAGGCGCTGTTTGTGCTTGTCTACGAATACGTGTGTGTGTGTGTGTGTGTGTTTTATGCAGTGTGTGACTAGCACTTCTTAGTAATTCGTGTGCCGAATACTCGAACTCCTGTGTGATTTGTTGATTAaaaaa                                                                       ]
[+] EMBL AU070689             [TTCCACCACGTCCGCGCGTGGAGCCACGAGAGCTTGCCGGGCGGCGGCCTCCTCCGGGTTCATCGCATGGACGCTCACCCTGCTCGCCATGGGATTGGCCGTCAAGGAGATTGACCTGCACGGCAGGAACGCCAGATTGAAAACCATGGAGTCCTTCACCATCATACTCTCGGCAACACAGCTGTTTTATCTGCTCGNCATTCACGGCGGGA GTANGAAGAAGGTCAGGTTTTTCTGATTAAAGTTGTGGAAGTGAAGACACCTTTGTGAAGCATTATTGGGCATAGATCATGGACTTTACGAGCCTAATTTGATTTCACCGGTTTGTGAAGANTAAGTTCG                                                                                                                                                                                                                              ]




>consensus_5756#0
TTCCACCACGTCCGCGCGTGGAGCCACGAGAGCTTGCCGGCGGCGGCCTCCTCCGGGTTC
ATCGCATGGACGCTCACCCTGCTCGCCATGGGATTGGCCGTCAAGGAGATTGACCTGCAC
GGCAGGAACGCCAGATTGAAAACCATGGAGTCCTTCACCATCATACTCTCGGCAACACAG
CTGTTTTATCTGCTCGCCATTCACGGCGGGAGGTAGAAGAAGGTCAGGTTTTTCTGATTA
AAGTTGTGAAGGTGAAGACACCTTTGTGAGCATTATTGGGCATAGATCATGGACTTTACG
AGCCTAATTTGATTTCACCGGTTTGTGAGATTAAGTTCGACATGGATCAACCAGATCGAG
GCGCTGTTTGTGCTTGTCTACGAATACGTGTGTGTGTGTGTGTGTGTGTTTTATGCAGTG
TGTGACTAGCACTTCTTAGTAATTCGTGTGCCGAATACTCGAACTCCTGTGTGATTTGTT
GATTATTTGGATGCGTTGATTTATACTGTATTGATTTCGCCGTGTCTGGTTAATCGATTT
GATTATGTGGACGTGATGGTT

clustalw multiple alignements is not computed in this case