cluster # 5757

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Oryza sativa
cluster # 5757 cluster # 5757 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5757#0 length = 431 sequences # 3

consensusID : consensus_5757#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 431
fasta sequence

                              [TCCTTGCTATTGTTGCATGCACTCGTTCTNCNCGGTTTGATCCTCTTAGTCAAAGTTATAGNCAATATCAACTACAGTCGCATCTCCTACTACAGCAACAAGTGCTCAGCCCATGCAGTGAGTTCGTAAGGCAACAGTATAGCATAGTGGCAACCCCCTTCTGGCAACCAGCTACGTTT-AATTGATAAACAACCAAGT-ATGCAGC-AGAGTGNTGAACAGCTCAGGCGTGTAG-GCAACAATCTCACTACCAGGCCATTAGTAGCGTTCAGGCGNTTGTGCAGCAACTACAGCTCAGGCAGGTCGGTGTTGTCTACTTTGATCAGACTCAAGCTCAAGCTCAAGCTTTGCTGCCTTAAACTTGCCATCCATATGTGGTATCTATCCTAACTACTACATTGCTCCGAGNTGTCCCACCGTTGGTGTCTGGTACT]

[+] EMBL AA749785             [TCCTTGCTATTGTTGCATGCACTCGTTCTNCNCGGTTTGATCCTCTTAGTCAAAGTTATAGNCAATATCAACTACAGTCGCATCTCCTACTACAGCAACAAGTGCTCAGCCCATGCAGTGAGTTCGTAAGGCAACAGTATAGCATAGTGGCAACCCCCTTCTGGCAACCAGCTACGTTT AATTGATAAACAACCAAGT ATGCAGC AGAGTGTTGAACAGt                                                                                                                                                                                                                    ]
[+] EMBL AA749784             [                                                                                        gCTACAGCAACAAGTGCTCAGCCCATGCAGTGAGTTCGTAAGGCAACACTATAGCATAGTGGCAACCCCCTTCTGGCAACCAGCTACGTTTCAATTGATAAACAACCAAGTCATGCAGCAACAGT NCGAACAGCTCAGGCGTGTAG GCAACAATCTCACTACCAGGCCATTAGTAGCGTTCAGGC                                                                                                                                                                ]
[+] EMBL AA749783             [                                                                                                                                                                                                                   gtcgTGAACAGCTCAGGCGTGTAGCGCAACAATCTCACTACCAGGCCATTAGTAGCGTTCAGGCGNTTGTGCAGCAACTACAGCTCAGGCAGGTCGGTGTTGTCTACTTTGATCAGACTCAAGCTCAAGCTCAAGCTTTGCTGCCTTAAACTTGCCATCCATATGTGGTATCTATCCTAACTACTACATTGCTCCGAGNTGTCCCACCGTTGGTGTCTGGTACT]




>consensus_5757#0
TCCTTGCTATTGTTGCATGCACTCGTTCTNCNCGGTTTGATCCTCTTAGTCAAAGTTATA
GNCAATATCAACTACAGTCGCATCTCCTACTACAGCAACAAGTGCTCAGCCCATGCAGTG
AGTTCGTAAGGCAACAGTATAGCATAGTGGCAACCCCCTTCTGGCAACCAGCTACGTTTA
ATTGATAAACAACCAAGTATGCAGCAGAGTGNTGAACAGCTCAGGCGTGTAGGCAACAAT
CTCACTACCAGGCCATTAGTAGCGTTCAGGCGNTTGTGCAGCAACTACAGCTCAGGCAGG
TCGGTGTTGTCTACTTTGATCAGACTCAAGCTCAAGCTCAAGCTTTGCTGCCTTAAACTT
GCCATCCATATGTGGTATCTATCCTAACTACTACATTGCTCCGAGNTGTCCCACCGTTGG
TGTCTGGTACT

clustalw multiple alignements is not computed in this case