cluster # 5834

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Oryza sativa
cluster # 5834 cluster # 5834 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5834#0 length = 573 sequences # 3

consensusID : consensus_5834#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 573
fasta sequence

                              [GGGAATATGCTTGGGCCGTCTAACATCAGGCGAGATCTCGACGTCAAGATCATCAACGA-TCGGGAGACGGGGAGGTCGCGCGGGTTCGGGTTCGTGACGTTCTCGAGCGAGCAGGCCATGCGCGACGCCATCGAGGGGATGAACGGCAAGGAGCTCGACGGCCGCAACATCACCGTCAACGAGGCCCAGTCGCGCCGCTCCGGAGGCGGAGGCGGAGGCGGCTACNGCCAGCNCNGCGGAGGCGGAGGCTACGGTGGCGGCGGCGGCTACGGTGGTGGCNGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCAAAAA]

[+] EMBL CB964741             [GGGAATATGCTTGGGCCGTCTAACATCAGGCGAGATCTCGACGTCAAGATCATCAACGACTCGGGAGACGGGGAGGTCGCGCGGGTTCGGGTTCGTGACGTTCTCGAGCGAGCAGGCCATGCGCGACGCCATCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU069731             [                                             AAGATCATCAACGA TCGGGAGACGGGGAGGTCGCGCGGGTTCGGGTTCGTGACGTTCTCGAGCGAGCAGGCCATGCGCGACGCCATCGAGGGGATGAACGGCAAGGAGCTCGACGGCCGCAACATCACCGTCAACGAGGCCCAGTCGCGCCGCTCCGGAGGCGGAGGCGGAGGCGGCTACNGCCAGCNCNGCGGAGGCGGAGGCTACGGTGGCGGCGGCGGCTACGGTGGTGGCNGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTG                                                                                                                                                                                                                               ]
[+] EMBL AU182246             [                                                                                                                                       GGGGATGAACGGCAAGGAGCTCGACGGCCGCAACATCACCGTCAACGAGGCCCAGTCGCGCCGCTCCGGAGGCGGAGGCGGAGGCGGCTACGGCCAGCGCGGCGGAGGCGGAGGCTACGGTGGCGGCGGCGGCTACGGTGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCAAAAA]




>consensus_5834#0
GGGAATATGCTTGGGCCGTCTAACATCAGGCGAGATCTCGACGTCAAGATCATCAACGAT
CGGGAGACGGGGAGGTCGCGCGGGTTCGGGTTCGTGACGTTCTCGAGCGAGCAGGCCATG
CGCGACGCCATCGAGGGGATGAACGGCAAGGAGCTCGACGGCCGCAACATCACCGTCAAC
GAGGCCCAGTCGCGCCGCTCCGGAGGCGGAGGCGGAGGCGGCTACNGCCAGCNCNGCGGA
GGCGGAGGCTACGGTGGCGGCGGCGGCTACGGTGGTGGCNGCCGTGGCGGCGGCGGCGGC
TACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGA
GCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCAT
CCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGG
TTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAA
TGAAATGAATGAATGAATCTTAGTGTGCAAAAA

clustalw multiple alignements is not computed in this case