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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5863 cluster # 5863       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5863#0 length = 928 sequences # 3  

consensusID : consensus_5863#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 928
fasta sequence
                              [ACCTCCTCCTCCTTTNTNATTACTCCCGCGGCCGACTCCCCAGCCCTGCTCCAGTTTGGTCCAATCCAACCAAGCAGAGGCTGCAGCCTGCGGAGAAGAGGAGAAAGAAACAGAGTTTCAGTTTCCGACATGCCGCGGCTGCTGCCTGGAACTGGAAGGGCCTCCTCCTTGTCCTCTTCTTTGCTACTGCTCCTGCTGCTCGGTGCCGCGATGGCGGCGGCGCCGGAGGCGGCGGCGGTGATGCCCATGGAGGCCTACTTCTCGCCGGCGGAGCTCGTTCGCATTGCGGGGTACGGCG-AAGAGCTGGTGTCGACGGTGATCGTGTCCGGGAAGGTCGTCTGCAAGCTCTCCCTCCGCCCACCCGGCTCCGACCTCCTCAGCATCGAGCTGCCAGGAGCTACAGTAGGAGTGGCCTGTGAAACTGGAGGTATAAAGACGATGGCTAACTCTGTATTCACAGTAACTGATGAGAATGGCAACTTCACCATAGAACTCCCTTCTCGGCTCCATGCCACACCAAACCTGGAGAAGGCTTGCTCTGTCAAGGTGCTCCAGCTCCCGCTAGACTGTGCGTGTTGGCCTCGCCGTAGTCCTAGTTACTACCATGGCATCCAGTTATCATCATCAGAGGATGGCATCCGCTCCTACACGACAGGGGTGATACGGCTGCAGCATCATGATACAAAGTCAGACATGTCCATGCACCATGTTGGTACAGAATAGAATTGATGATAGACAAACAATTGTTGATGTAAAGTAGTTCGATTCTTGGTTGAGTTCCATTTTCTTTAAATTTTCAAGAAGCGTAGTTGGGTAGATCGAATAGATGCCTTTTTCCATATATTTTCTTCCTATCCCTACTTCATTTCTTGTAATTATGACCTCCCTTTATAATATACAACCAGATGTCTGGGCTCCGCCTCAAAAA]

[+] EMBL C73247               [ACCTCCTCCTCCTTTNTNATTACTCCCGCGGCCGACTCCCCAGCCCTGCTCCAGTTTGGTCCAATCCAACCAAGCAGAGGCTGCAGCCTGCGGAGAAGAGGAGAAAGAAACAGAGTTTCAGTTTCCGACATGCCGCGGCTGCTGCCTGGAACTGGAAGGGCCTCCTCCTTGTCCTCTTCTTTGCTACTGCTCCTGCTGCTCGGTGCCGCGATGGCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK068630             [                                                            CCAATCCAACCAAGCAGAGGCTGCAGCCTGCGGAGAAGAGGAGAAAGAAACAGAGTTTCAGTTTCCGACATGCCGCGGCTGCTGCCTGGAACTGGAAGGGCCTCCTCCTTGTCCTCTTCTTTGCTACTGCTCCTGCTGCTCGGTGCCGCGATGGCGGCGGCGCCGGAGGCGGCGGCGGTGATGCCCATGGAGGCCTACTTCTCGCCGGCGGAGCTCGTTCGCATTGCGGGGTACGGCG AAGAGCTGGTGTCGACGGTGATCGTGTCCGGGAAGGTCGTCTGCAAGCTCTCCCTCCGCCCACCCGGCTCCGACCTCCTCAGCATCGAGCTGCCAGGAGCTACAGTAGGAGTGGCCTGTGAAACTGGAGGTATAAAGACGATGGCTAACTCTGTATTCACAGTAACTGATGAGAATGGCAACTTCACCATAGAACTCCCTTCTCGGCTCCATGCCACACCAAACCTGGAGAAGGCTTGCTCTGTCAAGGTGCTCCAGCTCCCGCTAGACTGTGCGTGTTGGCCTCGCCGTAGTCCTAGTTACTACCATGGCATCCAGTTATCATCATCAGAGGATGGCATCCGCTCCTACACGACAGGGGTGATACGGCTGCAGCATCATGATACAAAGTCAGACATGTCCATGCACCATGTTGGTACAGAATAGAATTGATGATAGACAAACAATTGTTGATGTAAAGTAGTTCGATTCTTGGTTGAGTTCCATTTTCTTTAAATTTTCAAGAAGCGTAGTTGGGTAGATCGAATAGATGCCTTTTTCCATATATTTTCTTCCTATCCCTACTTCATTTCTTGTAATTATGACCTCCCTTTATAATATACAACCAGATGTCTGGGCTC           ]
[+] EMBL AU085938             [                                                                                                                                                                                                                                                                       GCCGGCGAAGCTCGTTCGCATTGCGGGGTACGGCGAAAAAGCTGGTGTCGACGGTGATCGTGTCCGGGAAGGTCGTCTGCAAGCTCTCCCTCCGCCCACCCGGGTCCGACCTCCTCAGCATCGAGCTGCCAGGAGCTACAGTAGGAGTGGCCTGTGAAACTGGAGGTATAAAGACGATGGCTAACTCTGTATTCACAGTAACTGATGAGAATGGCAACTTCACCATAGAACTCCCTTCTCGGCTCCATGCCACACCAAACCTGGAGAAGGCTTGCTCTGTCAAGGTGCTCCAGCTCCCGCTAGACTGTGCGTGTTGGCCTCGCCGTAGTCCTAGTTACTACCATGGCATCCAGTTATCATCATCAGAGGATGGCATCCGCTCCTACACGACAGGGGTGATACGGCTGCAGCATCATGATACAAAGTCAGACATGTCCATGCACCATGTTGGTACAGAATAGAATTGATGATAGACAAACAATTGTTGATGTAAAGTAGTTCGATTCTTGGTTGAGTTCCATTTTCTTTAAATTTTCAAGAAGCGTAGTTGGGTAGATCGAATAGATGCCTTTTTCCATATATTTTCTTCCTATCCCTACTTCATTTCTTGTAATTATGACCTCCCTTTATAATATACAACCAGATGTCTGGGCTCCGCCTCAAAAA]


>consensus_5863#0 ACCTCCTCCTCCTTTNTNATTACTCCCGCGGCCGACTCCCCAGCCCTGCTCCAGTTTGGT CCAATCCAACCAAGCAGAGGCTGCAGCCTGCGGAGAAGAGGAGAAAGAAACAGAGTTTCA GTTTCCGACATGCCGCGGCTGCTGCCTGGAACTGGAAGGGCCTCCTCCTTGTCCTCTTCT TTGCTACTGCTCCTGCTGCTCGGTGCCGCGATGGCGGCGGCGCCGGAGGCGGCGGCGGTG ATGCCCATGGAGGCCTACTTCTCGCCGGCGGAGCTCGTTCGCATTGCGGGGTACGGCGAA GAGCTGGTGTCGACGGTGATCGTGTCCGGGAAGGTCGTCTGCAAGCTCTCCCTCCGCCCA CCCGGCTCCGACCTCCTCAGCATCGAGCTGCCAGGAGCTACAGTAGGAGTGGCCTGTGAA ACTGGAGGTATAAAGACGATGGCTAACTCTGTATTCACAGTAACTGATGAGAATGGCAAC TTCACCATAGAACTCCCTTCTCGGCTCCATGCCACACCAAACCTGGAGAAGGCTTGCTCT GTCAAGGTGCTCCAGCTCCCGCTAGACTGTGCGTGTTGGCCTCGCCGTAGTCCTAGTTAC TACCATGGCATCCAGTTATCATCATCAGAGGATGGCATCCGCTCCTACACGACAGGGGTG ATACGGCTGCAGCATCATGATACAAAGTCAGACATGTCCATGCACCATGTTGGTACAGAA TAGAATTGATGATAGACAAACAATTGTTGATGTAAAGTAGTTCGATTCTTGGTTGAGTTC CATTTTCTTTAAATTTTCAAGAAGCGTAGTTGGGTAGATCGAATAGATGCCTTTTTCCAT ATATTTTCTTCCTATCCCTACTTCATTTCTTGTAATTATGACCTCCCTTTATAATATACA ACCAGATGTCTGGGCTCCGCCTCAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)