These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5881#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2117 fasta sequence [CGTCTTCTCTTCTCCCCCCACTTCCTCCGCCTCCTCCGCCGCCGCGCTTCTCGCCGCCGCGGCGAGCCATGG-ACGCCGCAGGTTACCCGAAGATGCAAGGAGGAGGGGCGTCCTCCTCGTCGTCGTCCTCGGCTTCCTGCCGCGCCGCCGACGCAGCCGTGTGGGACGCGGTGCAGCAGCAGAAGCGGCAGCGCTGCCAGGGTTCTTCATCCAATGATCAAGTTGGACTCAGTACTGAAAATAATTCCTTCCAAGCACCTGAACCTGAGCTGCAGAATTCTGACTGTGTGGAAGATGAGGAAGAAGATTACTATTTGTATGATGAGGATGATGTCTGCTATGATGATGATGGAGACTATGAATTTGATGAAACTGACTTCAATCAGCAGCTAGCTGATAAGTTTGATGGTTTGGATTTGCCTCCGGGAGTGGAGGCTACCGTTCCATGGCTGC-AAAAAAAGGATATTGCTGATGGACCTAGCACTTTCAAGTCAATGGCAGAACTAGATGCTGATATTACTAAGAAATATGAATTCTTTAAGCAGTTTGATGTTGTTGAGAATTTTTCGGACCATCATTATGCTGATAAGCCTGTTGGGAAGACA-GGGAAAGACTGGACAAAAAGGATTCAGTATGACTGGAAACTTCTGGAGAAAGATTTACCAGCATCCATATATGTCCGTGT-GTCTG-AAAATCGAATGGACCTTCTGAGGGCTGTAATAATTGGACCTCAAGGAACACCTTACCATGATGGCCTTTTCTTCTTTGATGCTCAATTTACTAGTACTTATCCATCTACTCCTCCAGTGGTATATTATCATTCTGGAGGGCTTCGGCTCAATCCAAATTTATATGCTTGTGGAAAAGTCTGTCTTAGCCTGCTAGGCACCTGGTCTGGTAGTGGTTGTGAGAAGTGGAACTCAGCTCACTCAACTATGCTACAGGTTTTAGTCTCCATTCAAGCTCTCGTATTGAATGAGAACCCATACTTCAATGAGCCAGGATATGAGACCTATGCCAACAGTGCTACTGGACAGAAGAGTGCCATGGACTATAATGATACCACATTTCAGTACTCATGCAGGACGATGTTATACTCACTCCGTAGATCTCCACAGCACTTTGATGCCCTTGTAGCTGGCCACTTCCGCCACCGTGGTCATGCCATTCTGGCTGCATGCAAATATTACATGGAAGGTCATAAGGTTGGGTCCGTAGTCCCTAACGAGGACGAGGAGGATGCGAAGCAGCAGGACGACACTGATGCAGGAGGATCCGGCAGCAGCAGCGGAGCAAAGCCGCAGCCTGAAAAGCCAGACCTGTGCAAGGGCCGTGCTGCATCCTTCAAAACCAACATGGCCGTTCTGTTTGAGGAGCTCTTGATGGAATTCAACGTCAAGGGTGCTGACACCAAGAAGTTCTGCGATGAGAAGTTGAAGAAGAACCAGCAGGCTGCTGCTGCTGCTCGCTGAAGAGGCCCCCCAGCTGCAGCTACAAAACGCACAGATCTTCTCTAGTTCTGAGGGTTTCATAATGAAGCGAAAACCGTAGAAAGGGGTTTTGCTTGCCTAACTATAGAAGTGCTGTGTAGATAGTCCATTCTCGTTTTTCTCCTTTTGTTGTACAGGTTGAGTGTGTGGACTTAAAAAATTTAAATGATCATGTTAGATGCTAACTGAAGTATCATCAACCCACCCCTCGTTGTGGTGCGATCATGAAATAGACACCTGCATAAGTAAGCAAGGTGGCGTTCCATATGATTTATGTTAGCTTGCATTTAGGTTACACCCGTTGTTACTTGCAAGAGTGTTCTCCATCGGCTAGCGTGGTGGCTTTGATCATATGGTTAGATTTGCCCTTTTTCTTGTGAGTTCACTTTTTTTGCAGCTAACACTTGCGTTAGTTTCAAACTGCTTTACTAATAGATTTAATTCAACCTTGAGTTGACATTTATCTTCTCGGAAACATACACAGATAATGGTTATCTCAAGGTCGAATTACATCCGTCAGTAAAGAATTATTCATATGTTTCCGAGAAGATAACCATTATCTTGTATGAAACATTTGAACCATTTGTGCGATTTATCGTGGCTAGACTTTTTTTTTTAAAAAAAAAA] [+] EMBL AK069430 [CGTCTTCTCTTCTCCCCCCACTTCCTCCGCCTCCTCCGCCGCCGCGCTTCTCGCCGCCGCGGCGAGCCATGG ACGCCGCAGGTTACCCGAAGATGCAAGGAGGAGGGGCGTCCTCCTCGTCGTCGTCCTCGGCTTCCTGCCGCGCCGCCGACGCAGCCGTGTGGGACGCGGTGCAGCAGCAGAAGCGGCAGCGCTGCCAGGGTTCTTCATCCAATGATCAAGTTGGACTCAGTACTGAAAATAATTCCTTCCAAGCACCTGAACCTGAGCTGCAGAATTCTGACTGTGTGGAAGATGAGGAAGAAGATTACTATTTGTATGATGAGGATGATGTCTGCTATGATGATGATGGAGACTATGAATTTGATGAAACTGACTTCAATCAGCAGCTAGCTGATAAGTTTGATGGTTTGGATTTGCCTCCGGGAGTGGAGGCTACCGTTCCATGGCTGC AAAAAAAGGATATTGCTGATGGACCTAGCACTTTCAAGTCAATGGCAGAACTAGATGCTGATATTACTAAGAAATATGAATTCTTTAAGCAGTTTGATGTTGTTGAGAATTTTTCGGACCATCATTATGCTGATAAGCCTGTTGGGAAGACA GGGAAAGACTGGACAAAAAGGATTCAGTATGACTGGAAACTTCTGGAGAAAGATTTACCAGCATCCATATATGTCCGTGT GTCTG AAAATCGAATGGACCTTCTGAGGGCTGTAATAATTGGACCTCAAGGAACACCTTACCATGATGGCCTTTTCTTCTTTGATGCTCAATTTACTAGTACTTATCCATCTACTCCTCCAGTGGTATATTATCATTCTGGAGGGCTTCGGCTCAATCCAAATTTATATGCTTGTGGAAAAGTCTGTCTTAGCCTGCTAGGCACCTGGTCTGGTAGTGGTTGTGAGAAGTGGAACTCAGCTCACTCAACTATGCTACAGGTTTTAGTCTCCATTCAAGCTCTCGTATTGAATGAGAACCCATACTTCAATGAGCCAGGATATGAGACCTATGCCAACAGTGCTACTGGACAGAAGAGTGCCATGGACTATAATGATACCACATTTCAGTACTCATGCAGGACGATGTTATACTCACTCCGTAGATCTCCACAGCACTTTGATGCCCTTGTAGCTGGCCACTTCCGCCACCGTGGTCATGCCATTCTGGCTGCATGCAAATATTACATGGAAGGTCATAAGGTTGGGTCCGTAGTCCCTAACGAGGACGAGGAGGATGCGAAGCAGCAGGACGACACTGATGCAGGAGGATCCGGCAGCAGCAGCGGAGCAAAGCCGCAGCCTGAAAAGCCAGACCTGTGCAAGGGCCGTGCTGCATCCTTCAAAACCAACATGGCCGTTCTGTTTGAGGAGCTCTTGATGGAATTCAACGTCAAGGGTGCTGACACCAAGAAGTTCTGCGATGAGAAGTTGAAGAAGAACCAGCAGGCTGCTGCTGCTGCTCGCTGAAGAGGCCCCCCAGCTGCAGCTACAAAACGCACAGATCTTCTCTAGTTCTGAGGGTTTCATAATGAAGCGAAAACCGTAGAAAGGGGTTTTGCTTGCCTAACTATAGAAGTGCTGTGTAGATAGTCCATTCTCGTTTTTCTCCTTTTGTTGTACAGGTTGAGTGTGTGGACTTAAAAAATTTAAATGATCATGTTAGATGCTAACTGAAGTATCATCAACCCACCCCTCGTTGTGGTGCGATCATGAAATAGACACCTGCATAAGTAAGCAAGGTGGCG ] [+] EMBL AU181867 [ TTCTCCCCCCACTTCCTCCGCCTCCTCCGCCGCCGCGCTTCTCGCCGCCGCGGCGAGCCATGGNACGCCGCAGGTTACCCGAAGATGCAAGGAGGAGGGGCGTCCTCCTCGTCGTCGTCCTCGGCTTCCTGCCGCGCCGCCGACGCAGCCGTGTGGGACGCGGTGCAGCAGCAGAAGCGGCAGCGCTGCCAGGGTTCTTCATCCAATGATCAAGTTGGACTCAGTACTGAAAATAATTCCTTCCAAGCACCTGAACCTGAGCTGCAGAATTCTGACTGTGTGGAAGATGAGGAAGAAGATTACTATTTGTATGATGAGGATGATGTCTGCTATGATGATGATGGAGACTATGAATTTGATGAAACTGACTTCAATCAGCAGCTAGCTGATAAGTTTGATGGTTTGGATTTGCCTCCGGGAGTGGAGGCTACCGTTCCATGGCTGCAAAAAAAAGGATATTGCTGATGGACCTAGCACTTTCAAGTCAATGGCAGAACTAGATGCTGATATTACTAAGAAATATGAATTCTTTAAGCAGTTTGATGTTGTTGAGAATTTTTCGGACCATCATTATGCTGATAAGCCTGTTGGGAAGACAGGGGAAAGACTGGACAAAAAGGATTCAGTATGACTGGAAACTTCTGGAGAAAGATTTACCAGCATCCATATATGTCCGTGTGGTCTGAAAAATCG ] [+] EMBL BI812298 [ AAAAAATTTAAATGATCATGTTAGATGCTAACTGAAGTATCATCAACCCACCCCTCGTTGTGGTGCGATCATGAAATAGACACCTGCATAAGTAAGCAAGGTGCGGTTCCATATGATTTATGTTAGCTTGCATTTAGGTTACACCCGTTGTTACTTGCAAGAGTGTTCTCCATCGGCTAGCGTGGTGGCTTTGATCATATGGTTAGATTTGCCCTTTTTCTTGTGAGTTCACTTTTTTTGCAGCTAACACTTGCGTTAGTTTCAAACTGCTTTACTAATAGATTTAATTCAACCTTGAGTTGACATTTATCTTCTCGGAAACATACACAGATAATGGTTATCTCAAGGTCGAATTACATCCGTCAGTAAAGAATTATTCATATGTTTCCGAGAAGATAACCATTATCTTGTATGAAACATTTGAACCATTTGTGCGATTTATCGTGGCTAGACTTTTTTTTTTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||