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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5909 cluster # 5909       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5909#0 length = 407 sequences # 3  

consensusID : consensus_5909#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 407
fasta sequence
                              [TGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCGAGGGACTCGNTNANGNAGCCAAAAGGAGGGGCCAGGCC-N-GTNTCCGACTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCCGAGGGTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA-GGGTCTTCTTTCCCCGC-TGATTCCGCCAAGCCCGTTCCCTTNGCTGTNGTTTCGCTGGATA-GTAGAC-AGGGACAGTN-GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC]

[+] EMBL AU163358             [TGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCGAGGGACTCGNTNANGNAGCCAAAAGGAGGGGCCAGGCC N NTNTCCGACTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCCGAGGGTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA GGGTCTTCTTTCCCCGC TGATTCCGCCAAGCCCGTTCCCTTNGCTGTNGTTTCGCTGGATA GTAGAC AGGGACAGTN GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC]
[+] EMBL AU163345             [ GTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCGAGGGACTCGNTTANGGAGCCAAAAGGAGGGGCCAGGCC NCGTNTCCGACTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCCGAGGGTCCCACTTATCCTACACCTCTCAAGTCATTTCACANAGTCGGACTAGAGTCAAGCTCAACAGGGGTCTTCTTTNCCCGCTTGATTNCGC                                                                                                 ]
[+] EMBL AU175056             [   TCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCGAGGGACTCGGTNANGNAGCCAAAAGGAGGGGCCAGGCCGC GTNTCCGACTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCCGAGGGTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA GGGTCTTCTTTCCCCGC TGATTCCNCCAAGNCCGTT CCTTGGCTGTNGTTTCGCTGGATAGGTNGACAAGGGACAGTNGGGAATCTCGTTAATC                            ]


>consensus_5909#0 TGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTT AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCC CGAGGGACTCGNTNANGNAGCCAAAAGGAGGGGCCAGGCCNGTNTCCGACTCACGGAATA AGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCCGAGGGTCCCACTTATCCTA CACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCC CCGCTGATTCCGCCAAGCCCGTTCCCTTNGCTGTNGTTTCGCTGGATAGTAGACAGGGAC AGTNGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)