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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5917 cluster # 5917       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5917#0 length = 520 sequences # 3  

consensusID : consensus_5917#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 520
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTGAGCGCGAGAAAACAATTACGTGCAGCTTAACACGGGCA--CAC--AAAAAAAAAAAGAAAAAGAAAGAACATGCCCGAAGGAACGAAAGCGCTTAATTGCCGCCTGACTCCTCGCAACCCGGGGGGTTATACGCGATGAAGCTGATTAACTGCACCTGCCTAACGTTGTCAAAGCCAATGATGCGAACGAAGGCATCAGGGTATGCCTTCTTTGCCTCCTCGAGCTCCTTGAGCACTTGGGGGGGATCGGGGCATCCAAACATGGGCAGTTTCCACATGGGCCAGTACCTACCGGCATAGTATCCGGGGGATCTGTGATTCTCACGGGAGACGAATCCGACCTTGCTGAACTCCAAGCAAGGGACCCACTTAAATCGGAGCAGGGACTCGATCTGCTTCAAAAGGGCCTCCACTGGCAATGGCGGCAAGTACGACAGAGTCTCGAACTTCTTAATGCCCTCAATCGGGCACACCTGCATGCATCTGATCCTTCCGCCATTGC]

[+] EMBL CF300867             [TTTTTTTTTTTTTTTTTTTTTGAGCGCGAGAAAACAATTACGTGCAGCTTAACACGGGCA  CACAAAAAAAAAAAAAGAAAAAGAAAGAACATGCCCGAAGGAACGAAAGCGCTTAATTGCCGCCTGACTCCTCGCAACCCGGGGGGTTATACGCGATGAAGCTGATTAACTGCACCTGCCTAACGTTGTCAAAGCCAATGATGCGAACGAAGGCATCAGGGGATGCCTTCTTTGCCTCCTCGAGCTCCTTGAGCACTTGGGGGGGATCGGGGCATCCAAACATGGGCAGTTTCCACATGGGCCAGTACCTACCGGCATAGTATCCGGGGGATCTGTGATTCTCACGGGAGACGAATCCGACCTTGCTGAACTCCAAGCAAGGGACCCACTTAAATCGGAGCAGGGACTCGATCTGCTTCAAAAGGGCCTCC                                                                                           ]
[+] EMBL CF300204             [TTTTTTTTTTTTTTTTTTTTTGAGCGCGAAAAAACAATTACGTGCAGCTTAACACGGGCACCCAA  AAAAAAAAAAAGAAAAAGAAAGAACCTGCCCGAAGGAACGAAAGCGCTTAATTGCCGCCTGACTCCTCGCAACCCGGGGGCTTATACCCGATGAAACTGATTAACTGCACCTGCCTAACGTTGTCAAAGCCAATGATGCGAACGAAGGCATCAGGGTATGCCTTCTTTGCCTCCTCGAGCTCCTTGAGCAATTGGGGGGCATCGGGGCATCCAAACATGGGCAGTTTCCACATGGGCC                                                                                                                                                                                                                           ]
[+] EMBL CF300511             [   TTTTTTTTTTTTTTTTTGGAGCGCGAGAGAACAATTACGTGCAGCTTAACACGGGCA  CAC  AAAAAAAAAAAGAAAAAGAAAGAACATGCCCGAAGGAACGAAAGCGCTTAATTGCCGCCTGACTCCTCGCAACCCGGGGGGTTATACGCGATGAAGCTGATTAACTGCACCTGCCTAACGTTGTCAAAGCCAATGATGCGAACGAAGGCATCAGGGTATGCCTTCTTTGCCTCCTCGAGCTCCTTGAGCACTTGGGTGGGATCGGGGCATCCAAACATGGGCAGTTTCCACATGGGCCAGTACCTACCGTCATAGTATCCGGGTGATCTGTGATTCTCACGGGAGACGAATCCGACCTTGCTGAACTCCAAGCAAGGGACCCACTTAAATCGGAGCAGGTACTCGATCTGCTTCAAAAGGGCCTCCACTGGCAATGGCGGCAAGTACGACAGAGTCTCGAACTTCTTAATGCCCTCAATCGGGCACACCTGCATGCATCTGATCCTTCCGCCATTGC]


>consensus_5917#0 TTTTTTTTTTTTTTTTTTTTTGAGCGCGAGAAAACAATTACGTGCAGCTTAACACGGGCA CACAAAAAAAAAAAGAAAAAGAAAGAACATGCCCGAAGGAACGAAAGCGCTTAATTGCCG CCTGACTCCTCGCAACCCGGGGGGTTATACGCGATGAAGCTGATTAACTGCACCTGCCTA ACGTTGTCAAAGCCAATGATGCGAACGAAGGCATCAGGGTATGCCTTCTTTGCCTCCTCG AGCTCCTTGAGCACTTGGGGGGGATCGGGGCATCCAAACATGGGCAGTTTCCACATGGGC CAGTACCTACCGGCATAGTATCCGGGGGATCTGTGATTCTCACGGGAGACGAATCCGACC TTGCTGAACTCCAAGCAAGGGACCCACTTAAATCGGAGCAGGGACTCGATCTGCTTCAAA AGGGCCTCCACTGGCAATGGCGGCAAGTACGACAGAGTCTCGAACTTCTTAATGCCCTCA ATCGGGCACACCTGCATGCATCTGATCCTTCCGCCATTGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)