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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5947 cluster # 5947       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5947#0 length = 760 sequences # 3  

consensusID : consensus_5947#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 760
fasta sequence
                              [AAGTACTCGAGCAAAGAAAGAGAGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTGGGGCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTTTTTTTTTCACCAATGGCGGCAGGATCAGGTGCATGCAGGTGTGGCCTAACGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCGGCCGGCGGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTACAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACTGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCTGCTTCGACAACGTCACGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTTTGGTGGCAAATAAGCCGTCATCGTCATATATAGCCTTGTTTAATTGTTCATCTCTGATTCGATGATGTCTCCCCCCTTGTTTCGTGTGTTCCCAGTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCAAAAAAAAAAAAAAAACCCCCTGTCATGCCGTTACGTAGCATATCGTGACAGC]

[+] EMBL CF299554             [AAGTACTCGAGCAAAGAAAGAGAGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTGGGGCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTTTTTTTTTCACCAATGGCGGCAGGATCAGGTGCATGCAGGTGTGGCCTAACGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCGGCCGGCGGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTACAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACTGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCTGCTTCGACAACGTCACGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAG                                                                                                                                                                                                                              ]
[-] EMBL CF302234             [                                                                                                                                                                                                                                                                                                                                                                       GATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACTGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTTTGGTGGCAAATAAGCCGTCATCGTCATATATAGCCTTGTTTAATTGTTCATCTCTGATTCGATGATGTCTCCCCCCTTGTTTCGTGTGTTCCCAGTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCAAAAAAAAAAAAAAAACCCCCTGTCATGCCGTTACGTAGCATATCGTGACAGC]
[-] EMBL CF298449             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTTGTTTCGTGTGTTCCCAGTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTAAAAAAAAAAAAAAAA                                      ]


>consensus_5947#0 AAGTACTCGAGCAAAGAAAGAGAGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGAT GGCGTCGTGGGGCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCC CGTCGCCCGCCGCTCCGGCAACTCCAGCTTTTTTTTTTCACCAATGGCGGCAGGATCAGG TGCATGCAGGTGTGGCCTAACGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCGGCCG GCGGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGT GCCCTGCCTCGAGTACAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGG ATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACTGACGC CACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCG TATCATCTGCTTCGACAACGTCACGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCC CCCGGGCTGCGAGGAGTTTGGTGGCAAATAAGCCGTCATCGTCATATATAGCCTTGTTTA ATTGTTCATCTCTGATTCGATGATGTCTCCCCCCTTGTTTCGTGTGTTCCCAGTTTGTTC ATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCAAAAAAAAAAAAA AAACCCCCTGTCATGCCGTTACGTAGCATATCGTGACAGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)