cluster # 5965

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5965 cluster # 5965 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5965#0 length = 2894 sequences # 3
consensusID : consensus_5965#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2894
fasta sequence
                              [TTGTTGGTTGTTCCCTCCCTCCTTCCCATCCATTCTCGCCGAGCCACCCATTCCGCCACCTCCACCCCTCCCCCGCATTAACCCTCCTCCTCCGCTCGCCGCGCCGCGCCACCGATCGATCGCTGCGCTCCGTGCGTCTCACCACCTTGCTAGGAGGACGAACGCCGGCGGCGGGGAGGGGATGGAGGGGAAGCACGTGGTGATGTCGGCGGTGGGGATCGGGATAGGCGTCGGGGTGGGGCTGGGGCTGGCGTCCGCGCCGTGGGCAGGCGGCGGCGGGCAGGGGGCGAGGGTCGGGGTTACGGTGGAGAGGGTGGAGCAGGAGCTCCGCCGCCTCGTCGTCGACGGCGCCGACAGCAGGGTCACCTTCGACGGGTTCCCCTACTACCTCAGCGAGCAAACGCGTGTATTGCTGACAAGCGCGGCGTATGTTCACTTGAAGCAAGCAGACATCTCACAATACACCAGGAATCTTGCACCAGCTAGCCGTGCGATTCTATTGTCAGGCCCTGCAGAACTTTACCAGCAAATGCTTGCCAAAGCGCTTGCCCACTATTTTGAAGCAAAATTGCTGTTGCTAGATCCTACAGATTTTCTCATAAAGATCCATAGCAAATATGGTGGTGGTAGCAGCACAGACTCGTCTTTCAAAAGATCCATATCTGAGACGACCCTTGAAAAGGTGTCTGGATTACTTGGATCTCTTTCGATTCTACCACAAAAGGAGAAACCCAAAGGAACTATTCGTAGACAAAGCAGCATGACGGACATGAAATTAAGGAGCTCTGAAAGTACGAGCAGCTTCCCGAAGCTTAAAAGGAATGCCTCAACTTCATCTGATATGAGTAGTCTGGCATCACAAGGCCCTCCAAATAATCCAGCTTCTCTCAGACGTGCTAGCAGCTGGACTTTTGATGAGAAGATTTTGGTGCAAGCAGTATACAAGGTACTGCATTCAGTATCTAAGAAGAACCCAATTGTTCTCTACATAAGAGATGTTGAGAAGTTTCTTCACAAGTCCAAAAAAATGTATGTCATGTTTGAAAAACTACTGAATAAACTTGAAGGGCCAGTGCTAGTCCTTGGCTCAAGAATTGTGGATATGGACTTTGATGAAGAGTTGGATGAAAGACTAACTGCTTTATTTCCATACAACATCGAAATCAAGCCACCAGAAAATGAGAACCACCTTGTGAGCTGGAACTCCCAATTAGAAGAAGATATGAAGATGATTCAGTTCCAGGATAACCGGAACCATATTACGGAAGTCCTTGCCGAAAACGACCTTGAGTGTGATGATTTAGGCTCGATATGCCTATCTGATACTATGGTTCTAGGTAGGTACATTGAGGAGATTGTGGTTTCAGCAGTTTCTTATCACCTGATGAATAAGAAAGATCCGGAGTACCGAAACGGAAAATTACTTCTATCTGCAAAGAGCTTGTCCCATGCACTGGAAATTTTTCAAGAGAACAAGATGTATGATAAGGATAGCATGAAGTTGGAAGCAAAGCGTGATGCTTCAAAGGTGGCTGACAGGGGAATTGCTCCATTTGCTGCAAAATCAGAAACAAAACCTGCAACTTTGCTACCACCAGTACCTCCTACAGCTGCTGCTGCCCCTCCTGTTGAGAGCAAAGCAGAACCAGAGAAATTCGAGAAGAAGGATAATCCATCTCCAGCTGCAAAAGCACCTGAAATGCCGCCAGACAATGAGTTTGAAAAGCGCATCAGACCTGAAGTGATACCTGCTAATGAAATCGGTGTCACATTTGATGATATCGGTGCATTAAGTGATATCAAAGAATCCCTTCAAGAACTTGTCATGCTCCCTCTCAGAAGACCAGATCTCTTCAAAGGGGGTCTTCTTAAACCTTGCAGAGGTATATTACTTTTTGGTCCTCCTGGAACTGGCAAGACGATGCTAGCCAAGGCTATTGCAAATGAAGCTCAAGCGAGTTTCATAAATGTTTCAATGTCGACTATCACATCGAAATGGTTTGGTGAAGATGAAAAGAATGTTAGAGCATTGTTCACATTAGCTGCCAAAGTATCACCGACGATCATTTTTGTCGATGAGGTCGACAGCATGCTTGGTCAGCGGAACAGAGCTGGAGAGCACGAGGCAATGAGGAAGATAAAAAATGAGTTCATGACACACTGGGATGGCCTCTTGTCAAGACCAGATCAAAAAATTCTTGTCCTTGCTGCGACCAACCGACCCTTTGATCTTGATGAAGCTATCATTCGAAGGTTTGAGCGCAGGATCATGGTCGGCCTGCCATCATTGGAAAGTCGGGAATTGATTTTGAGGAGCCTTCTGTCGAAGGAGAAAGTTGATGGCGGTCTAGACTATAAGGAACTAGCCACCATGACTGAAGGATATAGTGGCAGTGATCTAAAGAACCTGTGCACAACAGCAGCGTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTGGAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAAAGAGAAGGACGAGACGATCATACTAAGGCCACTAAACATGAAAGATTTGAAAGAAGCAAAAAACCAGGTGGCGGCAAGCTTTGCTGCTGAAGGAACAATAATGGGTGAGCTGAAGCAATGGAATGAGTTGTACGGTGAAGGAGGCTCCAGAAAGAAACAACAGTTGACATACTTTCTCTGAACTATCTAAATATCCAGAGTGTATGAACATAATTTGAAAACTAGAATAGACGGAAAACAACCATGTGAAAATAGTCCAGTGTTTTAAGTTCCACCAGTTAAGAATGTTTGGGACCAAAGGAGCCTGGTTATGAAACCGGTTTTTTTTTGTTGTAAAACTTGATAGAGAACTTCCATACACAGGGACTATG]

[+] EMBL AK102301             [TTGTTGGTTGTTCCCTCCCTCCTTCCCATCCATTCTCGCCGAGCCACCCATTCCGCCACCTCCACCCCTCCCCCGCATTAACCCTCCTCCTCCGCTCGCCGCGCCGCGCCACCGATCGATCGCTGCGCTCCGTGCGTCTCACCACCTTGCTAGGAGGACGAACGCCGGCGGCGGGGAGGGGATGGAGGGGAAGCACGTGGTGATGTCGGCGGTGGGGATCGGGATAGGCGTCGGGGTGGGGCTGGGGCTGGCGTCCGCGCCGTGGGCAGGCGGCGGCGGGCAGGGGGCGAGGGTCGGGGTTACGGTGGAGAGGGTGGAGCAGGAGCTCCGCCGCCTCGTCGTCGACGGCGCCGACAGCAGGGTCACCTTCGACGGGTTCCCCTACTACCTCAGCGAGCAAACGCGTGTATTGCTGACAAGCGCGGCGTATGTTCACTTGAAGCAAGCAGACATCTCACAATACACCAGGAATCTTGCACCAGCTAGCCGTGCGATTCTATTGTCAGGCCCTGCAGAACTTTACCAGCAAATGCTTGCCAAAGCGCTTGCCCACTATTTTGAAGCAAAATTGCTGTTGCTAGATCCTACAGATTTTCTCATAAAGATCCATAGCAAATATGGTGGTGGTAGCAGCACAGACTCGTCTTTCAAAAGATCCATATCTGAGACGACCCTTGAAAAGGTGTCTGGATTACTTGGATCTCTTTCGATTCTACCACAAAAGGAGAAACCCAAAGGAACTATTCGTAGACAAAGCAGCATGACGGACATGAAATTAAGGAGCTCTGAAAGTACGAGCAGCTTCCCGAAGCTTAAAAGGAATGCCTCAACTTCATCTGATATGAGTAGTCTGGCATCACAAGGCCCTCCAAATAATCCAGCTTCTCTCAGACGTGCTAGCAGCTGGACTTTTGATGAGAAGATTTTGGTGCAAGCAGTATACAAGGTACTGCATTCAGTATCTAAGAAGAACCCAATTGTTCTCTACATAAGAGATGTTGAGAAGTTTCTTCACAAGTCCAAAAAAATGTATGTCATGTTTGAAAAACTACTGAATAAACTTGAAGGGCCAGTGCTAGTCCTTGGCTCAAGAATTGTGGATATGGACTTTGATGAAGAGTTGGATGAAAGACTAACTGCTTTATTTCCATACAACATCGAAATCAAGCCACCAGAAAATGAGAACCACCTTGTGAGCTGGAACTCCCAATTAGAAGAAGATATGAAGATGATTCAGTTCCAGGATAACCGGAACCATATTACGGAAGTCCTTGCCGAAAACGACCTTGAGTGTGATGATTTAGGCTCGATATGCCTATCTGATACTATGGTTCTAGGTAGGTACATTGAGGAGATTGTGGTTTCAGCAGTTTCTTATCACCTGATGAATAAGAAAGATCCGGAGTACCGAAACGGAAAATTACTTCTATCTGCAAAGAGCTTGTCCCATGCACTGGAAATTTTTCAAGAGAACAAGATGTATGATAAGGATAGCATGAAGTTGGAAGCAAAGCGTGATGCTTCAAAGGTGGCTGACAGGGGAATTGCTCCATTTGCTGCAAAATCAGAAACAAAACCTGCAACTTTGCTACCACCAGTACCTCCTACAGCTGCTGCTGCCCCTCCTGTTGAGAGCAAAGCAGAACCAGAGAAATTCGAGAAGAAGGATAATCCATCTCCAGCTGCAAAAGCACCTGAAATGCCGCCAGACAATGAGTTTGAAAAGCGCATCAGACCTGAAGTGATACCTGCTAATGAAATCGGTGTCACATTTGATGATATCGGTGCATTAAGTGATATCAAAGAATCCCTTCAAGAACTTGTCATGCTCCCTCTCAGAAGACCAGATCTCTTCAAAGGGGGTCTTCTTAAACCTTGCAGAGGTATATTACTTTTTGGTCCTCCTGGAACTGGCAAGACGATGCTAGCCAAGGCTATTGCAAATGAAGCTCAAGCGAGTTTCATAAATGTTTCAATGTCGACTATCACATCGAAATGGTTTGGTGAAGATGAAAAGAATGTTAGAGCATTGTTCACATTAGCTGCCAAAGTATCACCGACGATCATTTTTGTCGATGAGGTCGACAGCATGCTTGGTCAGCGGAACAGAGCTGGAGAGCACGAGGCAATGAGGAAGATAAAAAATGAGTTCATGACACACTGGGATGGCCTCTTGTCAAGACCAGATCAAAAAATTCTTGTCCTTGCTGCGACCAACCGACCCTTTGATCTTGATGAAGCTATCATTCGAAGGTTTGAGCGCAGGATCATGGTCGGCCTGCCATCATTGGAAAGTCGGGAATTGATTTTGAGGAGCCTTCTGTCGAAGGAGAAAGTTGATGGCGGTCTAGACTATAAGGAACTAGCCACCATGACTGAAGGATATAGTGGCAGTGATCTAAAGAACCTGTGCACAACAGCAGCGTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTGGAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAAAGAGAAGGACGAGACGATCATACTAAGGCCACTAAACATGAAAGATTTGAAAGAAGCAAAAAACCAGGTGGCGGCAAGCTTTGCTGCTGAAGGAACAATAATGGGTGAGCTGAAGCAATGGAATGAGTTGTACGGTGAAGGAGGCTCCAGAAAGAAACAACAGTTGACATACTTTCTCTGAACTATCTAAATATCCAGAGTGTATGAACATAATTTGAAAACTAGAATAGACGGAAAACAACCATGTGAAAATAGTCCAGTGTTTTAAGTTCCACCAGTTAAGAATGTTTGGGACCAAAGGAGCCTGGTTATGAAACCGGTTTTTTTTTGTTGTAAAACTTGATAGAGAACTTCCATACACAGGGACTATG]
[+] EMBL CF304170             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GACCCTTGAAAAGGTGTCTGGATTACTTGGATCTCTTTCGATTCTACCACAAAAGGAGAAACCCAAAGGAACTATTCGTAGACAAAGCAGCATGACGGACATGAAATTAAGGAGCTCTGAAAGTACGAGCAGCTTCCCGAAGCTTAAAAGGAATGCCTCAACTTCATCTGATATGAGTAGTCTGGCATCACAAGGCCCTCCAAATAATCCAGCTTCTCTCAGACGTGCTAGCAGCTGGACTTTTGATGAGAAGATTTTGGTGCAAGCAGTATACAAGGTACTGCATTCAGTATCTAAGAAGAACCCAATTGTTCTCTACATAAGAGATGTTGAGAAGTTTCTTCACAAGTCCAAAAAAATGTATGTCATGTTTGAAAAACTACTGAATAAACTTGAAGGGCCAGTGCTAGTCCTTGGCTCAAGAATTGTGGATATGGACTTTGATGAAGAGTTGGATGAAAGACTAACTGCTTTATTTCCATACAACATCGAAATCAAGCCACCAGAAAATGAGAACCACCTTGTGAGCTGGAACTCCCAATTAGAAGAAGATATGAAGATGATTCAGTTCCAGGATAACCGGAACCATATTACGGAAGTCCTTGCCGAAAACGACCTTGAGTGTGATGATTTAGGCTCGATATGCCTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF305963             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ggGAAGGATAATCCACCTCCAGCTGCAAAAGCACCTGAAATGCCGCCAGACAATGAGTTTGAAAAGCGCATCAGACCTGAAGTGATACCTGCTAATGAAATCGGTGTCACATTTGATGATATCGGTGCATTAAGTGATAAC ATGAATCCCTT AAGAACTTGTCATGCTCCCTCTCAGAAGACCTTATCTCTTCAAAGGGGGTCTTCTTAAACCTTGCAGAGGTATATTACTTTTTGGTCCTCCTGGAACTGGCAAGACGATGCTAGCCAAGGCTATTGCAAATGAAGCTCAAGCGAGTTTCATAAATGTTTCAATGTCGACTATCACATCGAAATGGTTTGGTGAAGATGAAAAGAATGTTAGAGCATTGTTCACATTAGCTGCCAAAGTATCACCGACGATCATTTTTGTCGATGAGGTCGACAGCATGCTTGGTCAGCGGAACAGAGCTGGAGAGCACGAGGCAATGAGGAAGATAAAAAATGAGTTCATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_5965#0
TTGTTGGTTGTTCCCTCCCTCCTTCCCATCCATTCTCGCCGAGCCACCCATTCCGCCACC
TCCACCCCTCCCCCGCATTAACCCTCCTCCTCCGCTCGCCGCGCCGCGCCACCGATCGAT
CGCTGCGCTCCGTGCGTCTCACCACCTTGCTAGGAGGACGAACGCCGGCGGCGGGGAGGG
GATGGAGGGGAAGCACGTGGTGATGTCGGCGGTGGGGATCGGGATAGGCGTCGGGGTGGG
GCTGGGGCTGGCGTCCGCGCCGTGGGCAGGCGGCGGCGGGCAGGGGGCGAGGGTCGGGGT
TACGGTGGAGAGGGTGGAGCAGGAGCTCCGCCGCCTCGTCGTCGACGGCGCCGACAGCAG
GGTCACCTTCGACGGGTTCCCCTACTACCTCAGCGAGCAAACGCGTGTATTGCTGACAAG
CGCGGCGTATGTTCACTTGAAGCAAGCAGACATCTCACAATACACCAGGAATCTTGCACC
AGCTAGCCGTGCGATTCTATTGTCAGGCCCTGCAGAACTTTACCAGCAAATGCTTGCCAA
AGCGCTTGCCCACTATTTTGAAGCAAAATTGCTGTTGCTAGATCCTACAGATTTTCTCAT
AAAGATCCATAGCAAATATGGTGGTGGTAGCAGCACAGACTCGTCTTTCAAAAGATCCAT
ATCTGAGACGACCCTTGAAAAGGTGTCTGGATTACTTGGATCTCTTTCGATTCTACCACA
AAAGGAGAAACCCAAAGGAACTATTCGTAGACAAAGCAGCATGACGGACATGAAATTAAG
GAGCTCTGAAAGTACGAGCAGCTTCCCGAAGCTTAAAAGGAATGCCTCAACTTCATCTGA
TATGAGTAGTCTGGCATCACAAGGCCCTCCAAATAATCCAGCTTCTCTCAGACGTGCTAG
CAGCTGGACTTTTGATGAGAAGATTTTGGTGCAAGCAGTATACAAGGTACTGCATTCAGT
ATCTAAGAAGAACCCAATTGTTCTCTACATAAGAGATGTTGAGAAGTTTCTTCACAAGTC
CAAAAAAATGTATGTCATGTTTGAAAAACTACTGAATAAACTTGAAGGGCCAGTGCTAGT
CCTTGGCTCAAGAATTGTGGATATGGACTTTGATGAAGAGTTGGATGAAAGACTAACTGC
TTTATTTCCATACAACATCGAAATCAAGCCACCAGAAAATGAGAACCACCTTGTGAGCTG
GAACTCCCAATTAGAAGAAGATATGAAGATGATTCAGTTCCAGGATAACCGGAACCATAT
TACGGAAGTCCTTGCCGAAAACGACCTTGAGTGTGATGATTTAGGCTCGATATGCCTATC
TGATACTATGGTTCTAGGTAGGTACATTGAGGAGATTGTGGTTTCAGCAGTTTCTTATCA
CCTGATGAATAAGAAAGATCCGGAGTACCGAAACGGAAAATTACTTCTATCTGCAAAGAG
CTTGTCCCATGCACTGGAAATTTTTCAAGAGAACAAGATGTATGATAAGGATAGCATGAA
GTTGGAAGCAAAGCGTGATGCTTCAAAGGTGGCTGACAGGGGAATTGCTCCATTTGCTGC
AAAATCAGAAACAAAACCTGCAACTTTGCTACCACCAGTACCTCCTACAGCTGCTGCTGC
CCCTCCTGTTGAGAGCAAAGCAGAACCAGAGAAATTCGAGAAGAAGGATAATCCATCTCC
AGCTGCAAAAGCACCTGAAATGCCGCCAGACAATGAGTTTGAAAAGCGCATCAGACCTGA
AGTGATACCTGCTAATGAAATCGGTGTCACATTTGATGATATCGGTGCATTAAGTGATAT
CAAAGAATCCCTTCAAGAACTTGTCATGCTCCCTCTCAGAAGACCAGATCTCTTCAAAGG
GGGTCTTCTTAAACCTTGCAGAGGTATATTACTTTTTGGTCCTCCTGGAACTGGCAAGAC
GATGCTAGCCAAGGCTATTGCAAATGAAGCTCAAGCGAGTTTCATAAATGTTTCAATGTC
GACTATCACATCGAAATGGTTTGGTGAAGATGAAAAGAATGTTAGAGCATTGTTCACATT
AGCTGCCAAAGTATCACCGACGATCATTTTTGTCGATGAGGTCGACAGCATGCTTGGTCA
GCGGAACAGAGCTGGAGAGCACGAGGCAATGAGGAAGATAAAAAATGAGTTCATGACACA
CTGGGATGGCCTCTTGTCAAGACCAGATCAAAAAATTCTTGTCCTTGCTGCGACCAACCG
ACCCTTTGATCTTGATGAAGCTATCATTCGAAGGTTTGAGCGCAGGATCATGGTCGGCCT
GCCATCATTGGAAAGTCGGGAATTGATTTTGAGGAGCCTTCTGTCGAAGGAGAAAGTTGA
TGGCGGTCTAGACTATAAGGAACTAGCCACCATGACTGAAGGATATAGTGGCAGTGATCT
AAAGAACCTGTGCACAACAGCAGCGTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAG
AAAGAAGGAACTGGAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGAT
GAAAGAGAAGGACGAGACGATCATACTAAGGCCACTAAACATGAAAGATTTGAAAGAAGC
AAAAAACCAGGTGGCGGCAAGCTTTGCTGCTGAAGGAACAATAATGGGTGAGCTGAAGCA
ATGGAATGAGTTGTACGGTGAAGGAGGCTCCAGAAAGAAACAACAGTTGACATACTTTCT
CTGAACTATCTAAATATCCAGAGTGTATGAACATAATTTGAAAACTAGAATAGACGGAAA
ACAACCATGTGAAAATAGTCCAGTGTTTTAAGTTCCACCAGTTAAGAATGTTTGGGACCA
AAGGAGCCTGGTTATGAAACCGGTTTTTTTTTGTTGTAAAACTTGATAGAGAACTTCCAT
ACACAGGGACTATG
clustalw multiple alignements is not computed in this case