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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5971 cluster # 5971       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5971#0 length = 855 sequences # 3  

consensusID : consensus_5971#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 855
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTAACATCCATCTCGTACCCTTGGTATAAATATATA-TAG-CCGGAGCTTCCATATATTTAATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAAATACCACTTTTACATCAAGTCAAAGAGAGATCAGGGGAAACAAAAACAAAAGCAGAGCCCGGCCGGTAAAATCAAAAGACGATGAACAAACGGGGAACACACGAAACAGGGGGGGAAACATCATCGAATCAAAGATGAACAATTAAACAGGGCTTTTTATGACGATGACGGTTTATTTGCCACCAAACTCCTCGCAGCCCGGGGGCTTGTAGGCGATAAACCTGATGACCTGCACCTGCCTGACGTTGTCAAACCCGATGATACGGACAAATGCATCAGGGTACGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGGGGCGTCAGGGCACCCGAACATGGGCAGCTTCCACATGGTCCAGTACATGCCATCGTAGTATCCGGGGGATCTGTGGTTCTCACGGTAGACGAATCCGCCCCTGCTGAACTCGAGGCAGGGCACCCACTTGCAACGGAGCAGGTACTCGATCTGATTCAGGAGGTCCTCCACGGTCAGCGGTGGCAGGTAGGAGAGGGTCTTGAACTTATTAATGCCCTCAATCGGCCACACTTGCATGCACGTGATCCTGCCGCCATTGCTGACGATGCATAAGGTGGAGTTGCCGGATCGGCGGGCGACGGGCATGCCGGCGGTGGACTTGAGCCCCTGGAAGGGAGCGACGGTGGTGGCCGACGACGCCATCACGGAGGGGGCCATCTGTGCAGCTCACCAAGCTCTCTCCTTGTTT]

[+] EMBL CF299527             [TTTTTTTTTTTTTTTTTTTTTTTTTTTAACATCCATCTCGTACCCTTGGTATAAATATATATTAG CCGGAGCTTCCATATATTTAATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAAATACCACTTTTACATCAAGTCAAAGAGAGATCAGGGGAAACAAAAACAAAAGCAGAGCCCGGCCGGTAAAATCAAAAGACGATGAACAAACGGGGAACACACGAAACAGGGGGGGAAACATCATCGAATCAAAGATGAACAATTAAACAGGGCTTTTTATGACGATGACGGTTTATTTGCCACCAAACTCCTCGCAGCCCGGGGGCTTGTAGGCGATAAACCTGATGACCTGCACCTGCCTGACGTTGTCAAACCCGATGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF334650             [    TTTTTTTTTTTTTTTTTTTTTTTAACATCCATCTCGTACCCTTTGTATAAATATATA TAGCCCGGAGCTTCCATATATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAAATACCACTTTTACATCAAGTCAAAGAGAGATCAGGGGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAGACGATGAACAAACTGGGAACACACGAAACAAGGGGGGAGACATCATCGAATCAAAGATGAACAATTAAACAAGGCTTTTTATGACGATGACGGTTTATTTGCCACCAAACTCCTCGCAGCCCGGGGGCTTGTAGGCGATGAAGCTGATGAGCTGCACCTGCCTGACGTTGTCAAAGCCGATGATACGGACAAATGCATCAGGGTACGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGGGGCGTCAGGGCACCCGAACATGGGCAGCTTCCACATGGTCCAGTAC                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CF325719             [                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGCTCCTTGAGCACCTGGGTGGCGTCAGTGCACCCGAACATGGGCAGCTTCCACATGGTCCAGTACATGCCATCGTAGTATCCGGGGGATCTGTGGTTCTCACGGTAGACGAATCCGCCCCTGCTGAACTCGAGGCAGGGCACCCACTTGCAACGGAGCAGGTACTCGATCTGATTCAGGAGGTCCTCCACGGTCAGCGGTGGCAGGTAGGAGAGGGTCTTGAACTTATTAATGCCCTCAATCGGCCACACTTGCATGCACGTGATCCTGCCGCCATTGCTGACGATGCATAAGGTGGAGTTGCCGGATCGGCGGGCGACGGGCATGCCGGCGGTGGACTTGAGCCCCTGGAAGGGAGCGACGGTGGTGGCCGACGACGCCATCACGGAGGGGGCCATCTGTGCAGCTCACCAAGCTCTCTCCTTGTTT]


>consensus_5971#0 TTTTTTTTTTTTTTTTTTTTTTTTTTTAACATCCATCTCGTACCCTTGGTATAAATATAT ATAGCCGGAGCTTCCATATATTTAATTCACATATGCCTCACCCAACAACATATAGTCGTA GCAAATACCACTTTTACATCAAGTCAAAGAGAGATCAGGGGAAACAAAAACAAAAGCAGA GCCCGGCCGGTAAAATCAAAAGACGATGAACAAACGGGGAACACACGAAACAGGGGGGGA AACATCATCGAATCAAAGATGAACAATTAAACAGGGCTTTTTATGACGATGACGGTTTAT TTGCCACCAAACTCCTCGCAGCCCGGGGGCTTGTAGGCGATAAACCTGATGACCTGCACC TGCCTGACGTTGTCAAACCCGATGATACGGACAAATGCATCAGGGTACGCCTTCTTGGCC TCCTCGAGCTCCTTGAGCACCTGGGGGGCGTCAGGGCACCCGAACATGGGCAGCTTCCAC ATGGTCCAGTACATGCCATCGTAGTATCCGGGGGATCTGTGGTTCTCACGGTAGACGAAT CCGCCCCTGCTGAACTCGAGGCAGGGCACCCACTTGCAACGGAGCAGGTACTCGATCTGA TTCAGGAGGTCCTCCACGGTCAGCGGTGGCAGGTAGGAGAGGGTCTTGAACTTATTAATG CCCTCAATCGGCCACACTTGCATGCACGTGATCCTGCCGCCATTGCTGACGATGCATAAG GTGGAGTTGCCGGATCGGCGGGCGACGGGCATGCCGGCGGTGGACTTGAGCCCCTGGAAG GGAGCGACGGTGGTGGCCGACGACGCCATCACGGAGGGGGCCATCTGTGCAGCTCACCAA GCTCTCTCCTTGTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)