cluster # 6038

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Oryza sativa
cluster # 6038 cluster # 6038 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6038#0 length = 685 sequences # 3

consensusID : consensus_6038#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 685
fasta sequence

                              [TTTTTTTTTTTTTTTTGGTTTCAAACAAAGCTGCTCAGTTGCATTTGCTGCAAACAGGTCAAAATAGAACATCCATTTTAGACACCACAAAAAGGAGTTGAATAACAGGTACAAGAGCATATGCTACAGGCTATATCAATGCAAACCACAAGTACTACAAACTCAAAGCTTCTAAGAGATCAACCGCCGGCGTGACACTGTGAGTGAGTGAACTACAGAAAAATGTCACTATGAACTAGCCTAGAGATGTACATTGACAGAGCAAACCAAGTTATGTACAGTTTAGGCGTTAGAGGGGCAAAATTCCTCAATTGCTCACCAAAAAAATTGGTTGGTGAAGCATCGACAACTCAACCAATCTGAAAGAATCCCTTCTAACTCTGGATCCTCTAGTCTGAACTGCACATCATCATCCGCTTCAGGATCAATTATCTCCTCTTTCTCTCCAGGAGCATCTTCATCTGCCTCGGATTCACCTGCCTCTTCATCAGTATGATCAGGAACTGTGGGCTCACTAGTGGCTATTCCCATCTCAGTATCATTACTCGAGACTTGCTCAGTTTGAATGGCTATTCCTCTCTCAGTATCATTACTTAAGACTTGCTCAGATTGGGAGTTAGATTTGGCTACTGTTTTGCTAACGGTTNTTTCACATATACAGGTAGAAGGGTTCTCATGAAATTCT]

[-] EMBL AU100644             [TTTTTTTTTTTTTTTTGGTTTCAAACAAAGCTGCTCAGTTGCATTTGCTGCAAACAGGTCAAAATAGAACATCCATTTTAGACACCACAAAAANGNGTTGAATAACAGGTACAAGAGCATATGCTACAGGCTATATCAATGCAAACCACAAGTACTACAAACTCAAAGCNTCTAAGANATCAACCGCCGGCGTGACACTGTGAGTGAGTNAACTACAGAAAAATGTCACTATGAACTAGCCTANAGATnt                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA758984             [       TTTTTTTTTGGTTTCAAACAAAGCTGCTCAATTGCATTTGCTGCAAACAGGTCAAAATAGAACATCCATTTTAGACACCACAAAAAGGAGTTGAATAACAGGTACAAGAGCATATGCTACAGGCTATATCAATGCAAACCACAAGTACTACAAACTCAAAGCTTCTAAGAGATCAACCGCCGGCGTGACACTGTGAGTGAGTGAACTACAGAAAAATGTCACTATGAACTAGCCTAGAGATGTACATTGACAGAGCAAACCAAGTTATGTACAGTTTAGGCGTTAGAGGGGCAAAATTCCTCAATTGCTCACCAAAAAAATTGGTTGGTGAAGCATCGACAACTCAACCAATCTGAAAGAATCCCTTCTAACTCTGGATCCTCTAGTCTGAACTGCACATCATCATCCGCTTCAGGATCAATTATCTCCTCTTTCTCTCCAGGAGCATCTTCATCTGCCTCGGATTCACCTGCCTCTTCATCAGTATGATCAGGAACTGTGGGCTCACTAGTGGCTATTCCCATCTCAGTATCATTACTCGAGACTTGCTCAGTTTGAATGGCTATTCCTCTCTCAGTATCATTACTTAAGACTTGCTCAGATTGGGAGTTAGATTTGGCTACTGTTTTGCTAACGGTTNTTTCACATATACAGGTAGAAGGGTTCTCATGAAATTCT]
[-] EMBL CA764039             [                                                                     CATCCATTTTAGACACCACAAAAAGGAGTTGAATAACAGGTACAAGAGCATATGCTACAGGCTATATCAATGCAAACCACAAGTACTACAAACTCAAAGCTTCTAAGAGATCAACCGCCGGCGTGACACTGTGAGTGAGTGAACTACAGAAAAATGTCACTATGAACTAGCCTAGAGATGTACATTGACAGAGCAAACCAAGTTATGTACAGTTTAGGCGTTAGAGGGGCAAAATTCCTCAATTGCTCACCAAAAAAATTGGTTGGTGAAGCATCGACAACTCAACTAATCTGAAAGAATCCCTTCTAA                                                                                                                                                                                                                                                                                                                   ]




>consensus_6038#0
TTTTTTTTTTTTTTTTGGTTTCAAACAAAGCTGCTCAGTTGCATTTGCTGCAAACAGGTC
AAAATAGAACATCCATTTTAGACACCACAAAAAGGAGTTGAATAACAGGTACAAGAGCAT
ATGCTACAGGCTATATCAATGCAAACCACAAGTACTACAAACTCAAAGCTTCTAAGAGAT
CAACCGCCGGCGTGACACTGTGAGTGAGTGAACTACAGAAAAATGTCACTATGAACTAGC
CTAGAGATGTACATTGACAGAGCAAACCAAGTTATGTACAGTTTAGGCGTTAGAGGGGCA
AAATTCCTCAATTGCTCACCAAAAAAATTGGTTGGTGAAGCATCGACAACTCAACCAATC
TGAAAGAATCCCTTCTAACTCTGGATCCTCTAGTCTGAACTGCACATCATCATCCGCTTC
AGGATCAATTATCTCCTCTTTCTCTCCAGGAGCATCTTCATCTGCCTCGGATTCACCTGC
CTCTTCATCAGTATGATCAGGAACTGTGGGCTCACTAGTGGCTATTCCCATCTCAGTATC
ATTACTCGAGACTTGCTCAGTTTGAATGGCTATTCCTCTCTCAGTATCATTACTTAAGAC
TTGCTCAGATTGGGAGTTAGATTTGGCTACTGTTTTGCTAACGGTTNTTTCACATATACA
GGTAGAAGGGTTCTCATGAAATTCT

clustalw multiple alignements is not computed in this case