cluster # 6101

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Oryza sativa
cluster # 6101 cluster # 6101 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6101#0 length = 708 sequences # 3

consensusID : consensus_6101#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 708
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTAACACCATACGCTTATTCATTATTATATTTTTTTTCAGAACCTTGGAATGAGGATATACATATTACAAATCAATTCACAAGTCAACATCAATGAAAAGACAAAATCAAGTCAGGGAACAACAAGATTTCCTTTCCAAAAAAATGCTAAAAGATTACACGATCCTTTTTACATTCTCAAAACCTATAAAAGACTCAACATATGATTTAAATTAACATGTATGATCATTCGGGGAGAACATTAAGAAAGAGG-AAAAAAAACATAGCTTATGATCTAACCAGTCTCATCCAAAAGGCCCTGCCCTCATGTCAGCAACTGGCTTTGGCATCACAGGACCCATGCACGAAAAGAGCGATGCTTTCTTTGGCTTACTA-CCAAATAGGAAAGTTCGAAGAGGTACTC-CAGCTTTCATTGACAGAGATCTGAAGCTATGTTGTGTTCGGTTTCTTCTTCCTATAGACAGTTCAATATTCTCTCTCAGCTTCAAAAGAGCCCTCCCAACCTCCACTTGGAGGCTCCTCACATGGCCCATCCCAGTTTGTAGCTCTTTGGAAACCTTGCTGTTCTCTTGCTTCATACTGCTCACCTCTCCTTGGAACTTTGCAGCCTGGAAAGGAGTGAAATGAGCTTCATCAGTTTGGCCCAATGCTGTGATCTTTGATATCTCCTCTTCTATGCTGCACA]

[+] EMBL CA762990             [TTTTTTTTTTTTTTTTTTTTTTTTTTAACACCATACGCTTATTCATTATTATATTTTTTTTCAGAACCTTGGAATGAGGATATACATATTACAAATCAATTCACAAGTCAACATCAATGAAAAGACAAAATCAAGTCAGGGAACAACAAGATTTCCTTTCCAAAAAAATGCTAAAAGATTACACGATCCTTTTTACATTCTCAAAACCTATAAAAGACTCAACATATGATTTAAATTAACATGTATGATCATTCGGGGAGAACATTAAGAAAGAGG AAAAAAAACATAGCTTATGATCTAACCAGTCTCATCCAAAAGGCCCTGCCCTCATGTCAGCAACTGGCTTTGGCATCACAGGACCCATGCACGAAAAGAGCGATGCTTTCTTTGGCTTACTA CCAAATAGGAAAGTTCGAAGAGGTACTC CAGCTTTCATTGACAGAAATCTGAAGCTATGTTGGGTTCGGCTTCTTCTTCCTATAGACAGTTCAATATTCTCTCTCAGCTTCAAAAGAGCCCTCCCAACCTCCACTTGGAGGCTCCTCACATGGCCCATCCCAGTTTGTAGCTCTTTGGAAACCTTGCTGTTCTCTTGCTTCATACTGCTCACCTCTCCTTGGAACTTTGCAGCCTGGAAAGGAGTGAAATGAGCTTCATCAGTTTGGC                                          ]
[-] EMBL AU094264             [                                         ttttTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGNGGATATACATATTACAAATCAATTCACAAGTCAACATCAATGAAAAGACAAAATCAAGTCAGGGAACAACAAGATTTCCTTTCCAAAAAAATGCTAAGAGATTACNCGATCCTTTTTACATTCTCAAAACCTATAAAAGACTCAACATATGATTTAAATTAACATGTATGATCATTCGTGTAGAACATTAAGAAAAAGGAAAAAAAAACATAGCTAATGATCTAACCAGTCTCATCCAAAAGGCCCTGCCCTCATGTCAGCAACTGGCTTTGGCATCACAGGACCCATGCNCGAAAAGAGCGATGCTTTCTTTGGCTTACTA CCAAATAGGAAAGTTCGAAGAGGTACTC CAGCTTTCATTGACAGAGATCTGAAGCTATGTTGTGTTCGGTTTCTTCTTCCTATAGACAGTTCAATATTCTCTCTCAGCTTCAA                                                                                                                                                                                                     ]
[-] EMBL C98986               [                                                                                                                                                                                                                                                                                                                                                                                 aAAAAGAGCGATGCTTTCTTTGGCTTACTACCCAAATAGGAAAGTTCGAAGAGGTACTCNCAGCTTTCATTGACAGAGATNTGAAGCTATGNTGTGTTCGGTTTCTTCTTCCTATAGACAGTTCAATATTCTCTCTCAGCTTCAAAAGAGCCCTCCCAACCTCCACTTGGAGGCTCCTNACATGGTCCATCCCAGTTTGTAGCTCTTTGGTAACCTTGCTGTTCTCTTGCTTCATACTGCTCACCTCTCCTTGGAACTTTGCAGCCTGGAAAGGAGTGAAATGAGCTTCATCAGTTTGCCCCAATGCTGTGATCTTTGATATCTCCTCTTCTATGCTGCACA]




>consensus_6101#0
TTTTTTTTTTTTTTTTTTTTTTTTTTAACACCATACGCTTATTCATTATTATATTTTTTT
TCAGAACCTTGGAATGAGGATATACATATTACAAATCAATTCACAAGTCAACATCAATGA
AAAGACAAAATCAAGTCAGGGAACAACAAGATTTCCTTTCCAAAAAAATGCTAAAAGATT
ACACGATCCTTTTTACATTCTCAAAACCTATAAAAGACTCAACATATGATTTAAATTAAC
ATGTATGATCATTCGGGGAGAACATTAAGAAAGAGGAAAAAAAACATAGCTTATGATCTA
ACCAGTCTCATCCAAAAGGCCCTGCCCTCATGTCAGCAACTGGCTTTGGCATCACAGGAC
CCATGCACGAAAAGAGCGATGCTTTCTTTGGCTTACTACCAAATAGGAAAGTTCGAAGAG
GTACTCCAGCTTTCATTGACAGAGATCTGAAGCTATGTTGTGTTCGGTTTCTTCTTCCTA
TAGACAGTTCAATATTCTCTCTCAGCTTCAAAAGAGCCCTCCCAACCTCCACTTGGAGGC
TCCTCACATGGCCCATCCCAGTTTGTAGCTCTTTGGAAACCTTGCTGTTCTCTTGCTTCA
TACTGCTCACCTCTCCTTGGAACTTTGCAGCCTGGAAAGGAGTGAAATGAGCTTCATCAG
TTTGGCCCAATGCTGTGATCTTTGATATCTCCTCTTCTATGCTGCACA

clustalw multiple alignements is not computed in this case