These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6102#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1386 fasta sequence [CGGCCATTTCGTCCAGGTCTACAGCAACGGCGATGTCTACGAGGGCCAGTTCAACCGCGGCCGCTGCACCGGCAGCGGCGTCTACTACTACTACATGAGTGGCAGGTACGAGGGGGACTGGATCGACGGCAAGTACGACGGCTATGGCGTCGAGACCTGGGCCAGGGGAAGCCGGTACAGGGGCCAGTACCGGCAAGGGCTTAGGCACGGGCACGGCGTATACAGGTTCTACACCGGGGATGTGTACGCCGGAGAATGGTCCAATGGGCAGAGCCATGGGTATGGCGTGCACACCTGCGAGGATGGCAGCCGCTACATTGGGGAATTCAAGAGGGGTGTCAAGCATGGACTTGGCCACTACCATTTCAGGAATGGCGATACCTATGCTGGGGAGTACTTTGCTGATAGAATGCATGGCTTCGGAGTCTACAGTTTTGCCAATGGTCACAGATACGAGGGAGCTTGGCATGAGGGTAGAAGGCAAGGATTAGGCATGTATACTTTCAGGAATGGAGAGACACAAGCAGGCCATTGGCAAAATGGAGTTCTTGACACCTTGAGCACCCAAAACATTATCCCTGGGTCCCCTATAGCTGTGAACCATTCCAAGGTCCTCAATGCAGTGCAGGAGGCGAGAAGAGCTGCAGAGAGGGCCTATGACGTCCCAAGAGTCGACGATAAGGTGAACAGGGCCGTTGCTTCAGCAAATAAAGCAGCCAATGCAGCCA-GGGTGGCTGCTGTGAAGGCTGCAC-AAAAGCGCATGCCAAATAATGGCAATGA-TCTACCGTTGTCAGTAG-TGTGAGAAGGAAAGCCAACATAAGGTTGGCACGAAGCTGCTTCGCGATGTCATCGCGTTGTTACCAATTCGCCCGACACAACCTTCCGCTTCCCTACAGGGGGAAGTTGCTCCACCCCATCGGGCCGTGGCGATACCCTGAGTGACTGCCGTTGCAGCAGAGCTTCGGAACCAGAGTTTTCCGCCATTCCCTCCATACATCTTTTGTGGTGTCTTTTG-CGACGC-AGCAGAACTCCTGCG-CAGAGAG--AGAGAGCTTCCTGTTGTCGAAGGCAACTGATCGAGGTCAGTAGGGTTCTCGTGCTTTCTTTTTTTTCTCTTCTTCAGTGTAATACTCATCCTATGTTTAGAGATACGATGATGTACACACCCCCAACATCAGGAGACAAAATCTCTGTTGCCTTTTGTCTCTTGGCTTTAAGCATGTATAGAACCTACATATTCCACGGTGCCGGCCGTGCTGGTTGGAGGAACCGCATGCCGCCCCCGCCATTGTCTGTACTACTTTGTACCTGAACGCATAAAGATAACCATGACCTTGAATGAATGGAATGCCTCCTGTTGTTTTAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK120574 [CGGCCATTTCGTCCAGGTCTACAGCAACGGCGATGTCTACGAGGGCCAGTTCAACCGCGGCCGCTGCACCGGCAGCGGCGTCTACTACTACTACATGAGTGGCAGGTACGAGGGGGACTGGATCGACGGCAAGTACGACGGCTATGGCGTCGAGACCTGGGCCAGGGGAAGCCGGTACAGGGGCCAGTACCGGCAAGGGCTTAGGCACGGGCACGGCGTATACAGGTTCTACACCGGGGATGTGTACGCCGGAGAATGGTCCAATGGGCAGAGCCATGGGTATGGCGTGCACACCTGCGAGGATGGCAGCCGCTACATTGGGGAATTCAAGAGGGGTGTCAAGCATGGACTTGGCCACTACCATTTCAGGAATGGCGATACCTATGCTGGGGAGTACTTTGCTGATAGAATGCATGGCTTCGGAGTCTACAGTTTTGCCAATGGTCACAGATACGAGGGAGCTTGGCATGAGGGTAGAAGGCAAGGATTAGGCATGTATACTTTCAGGAATGGAGAGACACAAGCAGGCCATTGGCAAAATGGAGTTCTTGACACCTTGAGCACCCAAAACATTATCCCTGGGTCCCCTATAGCTGTGAACCATTCCAAGGTCCTCAATGCAGTGCAGGAGGCGAGAAGAGCTGCAGAGAGGGCCTATGACGTCCCAAGAGTCGACGATAAGGTGAACAGGGCCGTTGCTTCAGCAAATAAAGCAGCCAATGCAGCCA GGGTGGCTGCTGTGAAGGCTGCAC AAAAGCGCATGCCAAATAATGGCAATGA TCTACCGTTGTCAGTAG TGTGAGAAGGAAAGCCAACATAAGGTTGGCACGAAGCTGCTTCGCGATGTCATCGCGTTGTTACCAATTCGCCCGACACAACCTTCCGCTTCCCTACAGGGGGAAGTTGCTCCACCCCATCGGGCCGTGGCGATACCCTGAGTGACTGCCGTTGCAGCAGAGCTTCGGAACCAGAGTTTTCCGCCATTCCCTCCATACATCTTTTGTGGTGTCTTTTG CGACGC AGCAGAACTCCTGCG CAGAGAG AGAGAGCTTCCTGTTGTCGAAGGCAACTGATCGAGGTCAGTAGGGTTCTCGTGCTTTC TTTTTTTCTCTTCTTCAGTGTAATACTCATCCTATGTTTAGAGATACGATGATGTACACACCCCCAACATCAGGAGACAAAATCTCTGTTGCCTTTTGTCTCTTGGCTTTAAGCATGTATAGAACCTACATATTCCACGGTGCCGGCCGTGCTGGTTGGAGGAACCGCATGCCGCCCCCGCCATTGTCTGTACTACTTTGTACCTGAACGCATAAAGATAACCATG ] [+] EMBL AA752408 [ cgaATGACGTCCCAAG GTCGACGATAAGGTGAACAGGGCCGTTGCTTCAGCAAATTAAGCAGCCAATGCAGCCAGGGGTGGCTGCTGTGAAAGCTGCACAAAAAGCGCATGCCAAATAATGGCAATGASTCTACCGTTGTCANTAGATGTGAGAAGGAAASCCACCATAAGGT ] [+] EMBL AU097641 [ CTCCACCCCATCGGGCCGTGGCGATACCCTGAGTGACTGCCGTTGCAGCAGAGCTTCGGAACCAGAGTTTTCCGCCATTCCCTCCATACATCTTTTGTGGTGTCTTTTGCCGACGCNAGCAGAACTCCTGCGCCAGAGAGNAAGAGAGCTTCCTGTTGTCGAAGGCAACTGATCGAGGTCAGTAGGGTTCTCGTGCTTTCTTTTTTTTCTCTTCTTCAGTGTAATACTCATCCTATGTTTAGAGATACGATGATGTACACACCCCCAACATCAGGAGACAAAATCTCTGTTGCCTTTTGTCTCTTGGCTTTAAGCATGTATAGAACCTACATATTCCACGGTGCCGGCCGTGCTGGTTGGAGGAACCGCATGCCGCCCCCGCCATTGTCTGTACTACTTTGTACCTGAACGCATAAAGATAACCATGACCTTGAATGAATGGAATGCCTCCTGTTGTTTTAA ] [+] EMBL AU058097 [ TCTTTTGTGGTGTCTTTTG CGACGC AGCAGAACTCCTGCG CAGAGAG AGAGAGCTTCCTGTTGTCGAAGGCAACTGAACGAGGTCAGTAGGGTTCTCGTGCTTTCTTTTTTTTCTCTTCTTCAGTGTAATACTCATCCTATGTTTAGAGATACGATGATGTACACACCCCCAACATCAGGAGACAAAATCTCTGTTGCCTTTTGTCTCTTGGCTTTAAGCATGTATAGAACCTACATATTCCACGGTGCCGGCCGTGCTGGTTGGAGGAACCGCATGCCGCCCCCNNCATTGTCTGTACTACTTTGTACCTGAACGCATAAAGATAACCATGACCTTGAATGAATGGAATGCCTCCTGTTGTTTTAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||