These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6167#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3398 fasta sequence [CCAGGTCTCTATCCAGTCCAGTCCACCTCCGAAGCTTTCTTTCGCTCCCACTCTGCTGCGCGCTCTCGTTCCATCTCGCTCTCGCTTTATCCCCCAAGGGGAGGTGGCGGATCTGCGGGTGCGTGACCTCCATATGGGATCTCGATGAGCTGGGGGGACTGTTCTTGAAGTGGTTCTTGGGAGCATCTTGTTGCAGGTTCAAGGAAGTGTAGTATCCTGTTGAAACTTGACGATTCAATTTGAATCAAGTGAAAAGCTCTGCTTGTTGGCGTATGTTAAACCATAAAAAAAGATGCCAACGAAAGGACAGTTTAGCAGAGAAAGGAATGTAAAGGCCACATTAGGTCGTGATGGACGTCAAAGGGGAAATTCACAAGATCAATCTGTACAAGTGCCAAAAGAGAAGATTGCAGTAGTCGGTGGGAACATTGATGGAAAATTTGAAGATAGAATCAGAGTTGTGAAAAATGAGAAGTTTCGAAGGCAACGGGAACCTCGGAGTGCAGATGCGGGTGGATCCTTGAAAGGCTCAAAACCATGGCCTGGTCGAAAGGCCACTACGGTTGATGAGCTTGTCAAGCATATGTCAAATGTTCCTTCATATTTGCAGCGTAAAGAGACATCAGGCCATCTTCAGGACAAGGCATTGAATGTTGGAGTTCTCGAGTGGGGCCTCCTAGCCAGGTGGTCTCACCAACAAAAGCATGAGTTTTCTAGCAGCCATGGTGCCTCTCCATCTAATACTAGTAGGTCCCTGATATTCTCTTCTCCATCCCAGTCATCTGCAAGTCCCAGCAGCAAATCTCTTGAAAGCAATCAATCTCCTACACTCAATGACCATCAGCATTGTTCTATGGAGTTTCAGCAAAGTGATCTTGAGGATAAATACCATGGGAAGGCCAGATATTCACCTAGCCCAAATTCTGCAGTGTTGAACTTGTTGCCTGTTCATGGAAAACACTTTCCAGAGAACACTGGCAAATACGGTGACTTGAATCTCAGAAACATATCTCCACTCTCGGACCCTCTTCTTACTGCCACTGGGAGTTCCATGCGACATGAAATGGTTGATGATGAGGAGACTACAAGGAATATAGAGGAGGCCGTCCATCATTGTTCGCGCAGGCTTTTTACAGATGATGATAACATTGGCCAAAGTTTCTTCACCTCACATAACAATGATTCTGCATGTGGTGATTTTCAGCAGAGCAGTGGCGTGACTGGTGAGGTTTTTGAGACTCTAGTGTCTAGTGCGGTGATGGAAATGGAAAGAAATGCCAGTTTGTCACCTGTTGGTTTCTCAAAAGATATTGGGCAACACCATGAATTTCCTCGAATTCCATACTCATGTCCACTTCCTATCATGGATTCATCTGAAGAGCTTGGCACCAGCAGAACTGGGACTCAAGGTGATTCTGTTGGTGCTGCTGTAACTATAGGTGAAAATCGCAACCAAAAGCAAATTTCCAGGGGTGCCTCTGAGAGAACTCCTCGGATCAGTGCAAAGTTCAGTGATATGGATGCGTCACCACATAGACATCTTGTTTCTGGACTGAATCGAGTGAACCGCTGTTCAAGCCTGAAGGATGGACCATGTCCTCGACAACCTGAAGCAAGCACCTCTGTGGATAAGATAAATGGAGATAAGTCATCAGGCAACAAAGGCAGTAGACGCAGCCCATTGAGGAGGATGTTAGATCCAATATTAAAGCCACGTCAGTCATCCACTTCTGGTCCAATTCAACCTTCATTTGTTCCAAAGTGTCATCTGCCTGGCCATATTGATAAGCAATCTCTGAGCTTGGGAGGATCTGCTTTGCAGAATGTTCAACGTAGGTCAGTTGATTCAGTGGTAAATTCAAATTGCCGAACAGAAACTAATACAAACCAGCCTCCTCAGGTCCTGAACAGTGAAAGGTACCTCCAGCAAGATATAGATTCAACAACAACAAGGCATGCGCTTCTGCAGCTAGCGTGGAAGAATGGCCTGCCTTTTTTCATGCTTTCTTGTGGTTCTGATATCCTGGTGGCTACCGTGAGAAGGAAGGGCATCTCCGATAACAATGATCTGGAGAGCACATACACTCTGTTTGGTGTTGAAGAACCTAAGAAAAGAGGTGGGGCTTGGATCAAGGCAGGTAATAAGAACAAGAAAGATCAGCTTGTTTATAATATTGTTGGGGAAATGAGGGTTTCACATCGAAAATCAAGATGCTACCAGGCAGAAAAAAACCATTTGCATAGAGAATTTGTTCTGGTTGGCT-CAGAGCAGCTACCATCTTCTGAAGAATCAGGTGATTCACATGTTAGCAGAGAGTTTGCGGCTTTTATTAGTGCGGTGTCTCAGCAAGAACCAGAAACTTCTCGTCACTCATCCTCACAGCATTCCAGCCGAAGCATGTCAACACCAACCGACTGTTCTTGCCCATTGGGAAATTTCCATCCTAATACGAGGGATGATAGTTGTGCATCATCCAGTGTTCTTGCCGTACTTCCTAATGGCTTCCATGGTACATCAACCTCAGGACAGCCACTACCTCTGATTGAGAGGTGGAAATCAGGAGGAGCGTGTGACTGTGGTGGGTGGGATGAAGGCTGCATGCTCAGTGTCCTCAGCGATGACGCCCGAGAAAACAAAGGTGAT-AAATCCACTCAAG-CAAACCAGACGACGGATGGAAGTCAACGGTTTGACTTGTTTGTTCAGGGTCGATCACGAGAAGACAAGCATGCTTTCAGTATGGTTTCATTCAGAGAAGGGTTATACACAGTTGAATTCAGATCATCCATTGCTTTACTTCAGGCTTTTGCTATGTGTATAGTGATGCTTCACGGCAGGCGCCC-TACCAGGACGCAAGCAGGTGTGCACGCATCGCAAGAGCACGCATCCCTCGCTGACCATAAGCTCAACAAGATCATGGCAGCTAGTCAAGGTAGAGCTCAGGCAAGCTATGTGCCACACCGGCCGCCGCTATCTCCTGTAGGGCGAGCCTAGCTTCCTGTGATAAAAATGTATGTTTTTC-TTTGTTTCTTTTC-GTTTTCTTCTGTAACTCGAGTTGCGTC-GTGGAATCTTATGCCATGATCCATATGCGACTCACATCGAAATGTGATGAATCTTATGGAATCGGCTTTAGCGGGGTAGCTAACTGTACATGTAAAATGACTAGGTGTGTTGCTGCAAGGCTCATCTCAGTGCTTAGCTACCC-TTTTTATATGCAAGCAAAGCAGATCCTCGCAAAAATTCTGTCACTCAACCCCTTCAGAAATGGCACCGATGTTGTGATACGTTTGTCCACTCTCTGTACATTTCTGGGGGCTGAAAGCCTGGAACTGCATTTTTAATCTGAGACTGAGCTTAAAGTTTTACTCTTGAAACACTGCACAATTATGTGCGTTAAAAA] [+] EMBL AK072790 [CCAGGTCTCTATCCAGTCCAGTCCACCTCCGAAGCTTTCTTTCGCTCCCACTCTGCTGCGCGCTCTCGTTCCATCTCGCTCTCGCTTTATCCCCCAAGGGGAGGTGGCGGATCTGCGGGTGCGTGACCTCCATATGGGATCTCGATGAGCTGGGGGGACTGTTCTTGAAGTGGTTCTTGGGAGCATCTTGTTGCAGGTTCAAGGAAGTGTAGTATCCTGTTGAAACTTGACGATTCAATTTGAATCAAGTGAAAAGCTCTGCTTGTTGGCGTATGTTAAACCATAAAAAAAGATGCCAACGAAAGGACAGTTTAGCAGAGAAAGGAATGTAAAGGCCACATTAGGTCGTGATGGACGTCAAAGGGGAAATTCACAAGATCAATCTGTACAAGTGCCAAAAGAGAAGATTGCAGTAGTCGGTGGGAACATTGATGGAAAATTTGAAGATAGAATCAGAGTTGTGAAAAATGAGAAGTTTCGAAGGCAACGGGAACCTCGGAGTGCAGATGCGGGTGGATCCTTGAAAGGCTCAAAACCATGGCCTGGTCGAAAGGCCACTACGGTTGATGAGCTTGTCAAGCATATGTCAAATGTTCCTTCATATTTGCAGCGTAAAGAGACATCAGGCCATCTTCAGGACAAGGCATTGAATGTTGGAGTTCTCGAGTGGGGCCTCCTAGCCAGGTGGTCTCACCAACAAAAGCATGAGTTTTCTAGCAGCCATGGTGCCTCTCCATCTAATACTAGTAGGTCCCTGATATTCTCTTCTCCATCCCAGTCATCTGCAAGTCCCAGCAGCAAATCTCTTGAAAGCAATCAATCTCCTACACTCAATGACCATCAGCATTGTTCTATGGAGTTTCAGCAAAGTGATCTTGAGGATAAATACCATGGGAAGGCCAGATATTCACCTAGCCCAAATTCTGCAGTGTTGAACTTGTTGCCTGTTCATGGAAAACACTTTCCAGAGAACACTGGCAAATACGGTGACTTGAATCTCAGAAACATATCTCCACTCTCGGACCCTCTTCTTACTGCCACTGGGAGTTCCATGCGACATGAAATGGTTGATGATGAGGAGACTACAAGGAATATAGAGGAGGCCGTCCATCATTGTTCGCGCAGGCTTTTTACAGATGATGATAACATTGGCCAAAGTTTCTTCACCTCACATAACAATGATTCTGCATGTGGTGATTTTCAGCAGAGCAGTGGCGTGACTGGTGAGGTTTTTGAGACTCTAGTGTCTAGTGCGGTGATGGAAATGGAAAGAAATGCCAGTTTGTCACCTGTTGGTTTCTCAAAAGATATTGGGCAACACCATGAATTTCCTCGAATTCCATACTCATGTCCACTTCCTATCATGGATTCATCTGAAGAGCTTGGCACCAGCAGAACTGGGACTCAAGGTGATTCTGTTGGTGCTGCTGTAACTATAGGTGAAAATCGCAACCAAAAGCAAATTTCCAGGGGTGCCTCTGAGAGAACTCCTCGGATCAGTGCAAAGTTCAGTGATATGGATGCGTCACCACATAGACATCTTGTTTCTGGACTGAATCGAGTGAACCGCTGTTCAAGCCTGAAGGATGGACCATGTCCTCGACAACCTGAAGCAAGCACCTCTGTGGATAAGATAAATGGAGATAAGTCATCAGGCAACAAAGGCAGTAGACGCAGCCCATTGAGGAGGATGTTAGATCCAATATTAAAGCCACGTCAGTCATCCACTTCTGGTCCAATTCAACCTTCATTTGTTCCAAAGTGTCATCTGCCTGGCCATATTGATAAGCAATCTCTGAGCTTGGGAGGATCTGCTTTGCAGAATGTTCAACGTAGGTCAGTTGATTCAGTGGTAAATTCAAATTGCCGAACAGAAACTAATACAAACCAGCCTCCTCAGGTCCTGAACAGTGAAAGGTACCTCCAGCAAGATATAGATTCAACAACAACAAGGCATGCGCTTCTGCAGCTAGCGTGGAAGAATGGCCTGCCTTTTTTCATGCTTTCTTGTGGTTCTGATATCCTGGTGGCTACCGTGAGAAGGAAGGGCATCTCCGATAACAATGATCTGGAGAGCACATACACTCTGTTTGGTGTTGAAGAACCTAAGAAAAGAGGTGGGGCTTGGATCAAGGCAGGTAATAAGAACAAGAAAGATCAGCTTGTTTATAATATTGTTGGGGAAATGAGGGTTTCACATCGAAAATCAAGATGCTACCAGGCAGAAAAAAACCATTTGCATAGAGAATTTGTTCTGGTTGGCT CAGAGCAGCTACCATCTTCTGAAGAATCAGGTGATTCACATGTTAGCAGAGAGTTTGCGGCTTTTATTAGTGCGGTGTCTCAGCAAGAACCAGAAACTTCTCGTCACTCATCCTCACAGCATTCCAGCCGAAGCATGTCAACACCAACCGACTGTTCTTGCCCATTGGGAAATTTCCATCCTAATACGAGGGATGATAGTTGTGCATCATCCAGTGTTCTTGCCGTACTTCCTAATGGCTTCCATGGTACATCAACCTCAGGACAGCCACTACCTCTGATTGAGAGGTGGAAATCAGGAGGAGCGTGTGACTGTGGTGGGTGGGATGAAGGCTGCATGCTCAGTGTCCTCAGCGATGACGCCCGAGAAAACAAAGGTGAT AAATCCACTCAAG CAAACCAGACGACGGATGGAAGTCAACGGTTTGACTTGTTTGTTCAGGGTCGATCACGAGAAGACAAGCATGCTTTCAGTATGGTTTCATTCAGAGAAGGGTTATACACAGTTGAATTCAGATCATCCATTGCTTTACTTCAGGCTTTTGCTATGTGTATAGTGATGCTTCACGGCAGGCGCCC TACCAGGACGCAAGCAGGTGTGCACGCATCGCAAGAGCACGCATCCCTCGCTGACCATAAGCTCAACAAGATCATGGCAGCTAGTCAAGGTAGAGCTCAGGCAAGCTATGTGCCACACCGGCCGCCGCTATCTCCTGTAGGGCGAGCCTAGCTTCCTGTGATAAAAATGTATGTTTTTC TTTGTTTCTTTTC GTTTTCTTCTGTAACTCGAGTTGCGTC GTGGAATCTTATGCCATGATCCATATGCGACTCACATCGAAATGTGATGAATCTTATGGAATCGGCTTTAGCGGGGTAGCTAACTGTACATGTAAAATGACTAGGTGTGTTGCTGCAAGGCTCATCTCAGTGCTTAGCTACCC TTTTT ] [+] EMBL C72627 [ GTGGTAAATTCAAATTGCCGAACAGAAACTAATACAAACCAGCCTCCTCAGGTCCTGAACAGTGAAAGGTACCTCCAGCAAGATATAGATTCAACAACAACAAGGCATGCGCTTCTGCAGCTAGCGTGGAAGAATGGCCTGCCTTTTTTCATGCTTTCTTGTGGTTCTGATATCCTGGTGGCTACCGTGAGAAGGAAGGGCATCTCCGATAACAATGATCTGGAGAGCACATACACTCTGTTTGGTGTTGAAGAACCTAAGAAAAGAGGTGGGGCTTGGATCAAGGCAGGTAATAAGAACAAGAAAGATCAGCTTGTTTATAATATTGTTGGGGAAATGAGGGTTTCACATCGAAAATCAAGATGCTACCAGGCAGAAAAAAACCATTTGCATAGAGAATTTGTCCTGGTTGGCTCCAGAGCAGCTACCATCTTC ] [+] EMBL AU085862 [ tgaAAGGCTGCATGCTCAGTGTCCTCACCGATGACCCCCGAGAAANCAAAGGTGATAAAATCCATTCAAGNCAAACCAGACGACGGATGGAAGTCAACGGTTTGACTTGTTTGTTCAGGGTCGATCACGAGAAGACAAGCATGCTTNCAGTATGGTTTCATTCAGAGAAGGGTTATACACAGTTGAATTCAGATCATCCATTGCTTTACTTCAGGCTTTTGCTATGTGTATAGTGATGCTTCACGGCAGGCGCCC TACCAGGACGCAAGCAGGTGTGCACGCATCGCAAGAGCACGCATCCCTCGCTGACCATAAGCTCAACAAGATCATGGCAGCTAGTCAAGGTAGAGCTCAGGCAAGCTATGTGCCACACCGGCCGCCGCTATCTCCTGTAGGGCGAGCCTAGCTTCCTGTGATAAAAATGTATGTTTTTC TTTGTTTCTTTTC GTTTTCTTCTGTAACTCGAGTTGCGTC GTGGAATCTTATGCCATGATCCATATGCGACTCACATCGAAATGTGATGAATCTTATGGAATCGGCTTTAGCGGGGTAGCTAACTGTACATGTAAAATGACTAGGTGTGTTGCTGCAAGGCTCATCTCAGTGCTTAGCTACCC TTTTTATATGCAAGCAAAGCAGATCCTCGCAAAAA ] [+] EMBL BI806308 [ gccaGCCCATACCAGGACACAA CAGGTGTGCACACATCGCAAGACCAC CATCCATCTCTGACCATAAGCTCAACAAGATCAT GCAGCTAGTCAAGTTAGAGCTCA GCAAGCTATGTGCCACACCGGCCACCGCTATCTCCTGTAGGGCGAGCCTAGCTTCCTGTGATAAAAATGTATGTTTTTCATTTGTTTCTTTTCAGTTTTCTTCTGTAACTCGAGTTGCGTCAGTGGAATCTTATGCCATGATCCATATGCGACTCACATCGAAATGTGATGAATCTTATGGAATCGGCTTTAGCGGGGTAGCTAACTGTACATGTAAAATGACTAGGTGTGTTGCTGCAAGGCTCATCTCAGTGCTTAGCTACCCATTTTTATATGCAAGCAAA CAGATCCTCGCAAAGCTTCTGTCACTCAACCCCTTCAGAAATGGCACCGATGTTGTGATACGTTTGTCCACTCTCTGTACATTTCTGGGGGCTGAAAGCCTGGAACTGCATTTTTAATCTGAGACTGAGCTTAAAGTTTTACTCTTGAAACACTGCACAATTATGTGCGTTAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||