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Oryza sativa
cluster # 6249 cluster # 6249       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6249#0 length = 1015 sequences # 4  

consensusID : consensus_6249#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1015
fasta sequence
                              [TACTAGTCGAGTCGTCTTCATCTTCGAGAAGGGAGAAATTTCAGAGAGATTTTTTATTTATTTATTTTTGGATTTTGGGATCGGCGGCCGACGCTGTCGAGTACCGGAGTAGGGGAGCTCGCCGGAGTAAGCTCTTCTCAGGCTGTGCGGGGGTGGCGGAGGGCGGCGCGGCGCGGCGAGGGGGCATGGACACGATGAGGGGGGCGCTGGAGCGGGCGAGGATGCTGGTGGGGATGGAGGTGGACGAGGAGTCGGCGCCGGAGGAGCAGTCCTTCTTCGACGACGTCACCCGCAACTGCGCCCTCACCACCACCCAGAGGCTGTACGGCTTCGCGATATGCTTGGCTGCCGGATTGACGTGCACCTTCTTGTCAATGCTTGTTTTCTTCAATCCTGTGAAATTCGGGGTAACATTCACCCTTGGCAATTTGATGGCACTTGGAAGTACAGCGTTTCTTATAGGTCCCAAAAGGCAATTTGACATGATGCTTGATTCTGTGCGGATATATGCAACTGCTGTATACATTGCAAGCATCATAATTGCTCTGTTCTGTGCTCTCTTTGTGCACAGCAAGCTGCTGACTCTACTTGCCATTATCTTGGAATTTGGTGCTCTTGTTTGGTACAGTCTAAGCTATATACCCTTTGCACGCTCGGTTGTTTCGAAGGTGATGACGTCTTGCTTCGACACTGAATTCTAGAATGACCATCCTGATCTACATGTTGTTGCTGGACGCATAGATGATATATCTGTAATATACTGTGTATTTTGATGGAGAAGTGGAGTGGGGGTCATCTTCTCCGATTAGCCTGTGTAGTCATTCTGATGTTGTGAAGACACACGGATTTGTGCGTCTTATGCTCAGAGATCATGTCATCTTTTCCTCACTTCCCCCCCTTCTTCCCCACATTTGTACATGGTAACCACTTACACTCCGCATTCGAACGTTTACTGTGCAGTTTGTTTGGATTGTCCTAGGTTGCTCCTGGATTTTCCTGCTTCTCAGAAAAAAAA]

[+] EMBL AK103450             [TACTAGTCGAGTCGTCTTCATCTTCGAGAAGGGAGAAATTTCAGAGAGATTTTTTATTTATTTATTTTTGGATTTTGGGATCGGCGGCCGACGCTGTCGAGTACCGGAGTAGGGGAGCTCGCCGGAGTAAGCTCTTCTCAGGCTGTGCGGGGGTGGCGGAGGGCGGCGCGGCGCGGCGAGGGGGCATGGACACGATGAGGGGGGCGCTGGAGCGGGCGAGGATGCTGGTGGGGATGGAGGTGGACGAGGAGTCGGCGCCGGAGGAGCAGTCCTTCTTCGACGACGTCACCCGCAACTGCGCCCTCACCACCACCCAGAGGCTGTACGGCTTCGCGATATGCTTGGCTGCCGGATTGACGTGCACCTTCTTGTCAATGCTTGTTTTCTTCAATCCTGTGAAATTCGGGGTAACATTCACCCTTGGCAATTTGATGGCACTTGGAAGTACAGCGTTTCTTATAGGTCCCAAAAGGCAATTTGACATGATGCTTGATTCTGTGCGGATATATGCAACTGCTGTATACATTGCAAGCATCATAATTGCTCTGTTCTGTGCTCTCTTTGTGCACAGCAAGCTGCTGACTCTACTTGCCATTATCTTGGAATTTGGTGCTCTTGTTTGGTACAGTCTAAGCTATATACCCTTTGCACGCTCGGTTGTTTCGAAGGTGATGACGTCTTGCTTCGACACTGAATTCTAGAATGACCATCCTGATCTACATGTTGTTGCTGGACGCATAGATGATATATCTGTAATATACTGTGTATTTTGATGGAGAAGTGGAGTGGGGGTCATCTTCTCCGATTAGCCTGTGTAGTCATTCTGATGTTGTGAAGACACACGGATTTGTGCGTCTTATGCTCAGAGATCATGTCATCTTTTCCTCACTTCCCCCCCTTCTTCCCCACATTTGTACATGGTAACCACTTACACTCCGCATTCGAACGTTTACTGTGCAGTTTGTT                                                 ]
[+] EMBL CB646604             [                                                                                          ACGCTGCCTAGTACCGGAGTAGGGGAGCTCGCCGGAGTAAGCTCTTCTCAGGCTGTGCGGGGGTGGCGGAGGGCGGCGCGGCGCGGCGAGGGGGCATGGACACCATGAGGGGGGCGCTGGAGCGGGCGAGGATGCTGGTGGGGATGGAGGTGGACCAGGAGTCCGCGCCGGAGGAGCAGTCCTTCTTCGACGACGTCACCCGCAACTGCGCCCTCACCACCACCCAGAGGCTGTACGGCTTCGCGATATGCTTGGCTGCCGGATTGACGTGCACCTTCTTGTCAATGCTTGTTTTCTTCAATCCTGTGAAATTCGGGGTAACATTCACCCTTGGCAATTTGATGGCACTTGGAAGTACAGCGTTTCTTATAGGTCCCAAAAGGCAATTTGACATGATGCTTGATTCTGTGCGGATATATGCAACTGCTGTATACATTGCAAGCATCATAATTGCTCTGTTCTGTGCTCTCTTTGTGCACAGCAAGCTGCTGACTCTACTTGCCATTATCTTGGAATTTGGTGCTCTTGCTTGGTACAGTCTAAGCTATATACCCTTTGCACGCTCGGTTGTTTCCAAAGTGA                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA754935             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGAAGTGGAGTGGGGGTCATCTTCTCCGATTAGCCTGTGTAGTCATTCTGATGTTGTGAAGACACACGGATTTGTGCGTCTTATGCTCAGAGATCATGTCATCTTTTCCTCACTTCCCCCCCTTCTTCCCCACATTTGTACATGGTAACCACTTACACTCCGCATTCGAACGTTTACTGTGCAGTTTGTTTGGATTGTCCTAGGTTGCTCCTGGATTTTCCTGCTTCTCAGAAAAAAAA]
[-] EMBL D43533               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTATGCTCAGAGATCGTGTCATCTTTTCCTCACTTCCCCCCCTTCTCCCCCACATTTGTACATGGTAACCACTTACACTCCGCATTTGAACGTTTACTGTGCAGTTTGTTTGGATTGTCCTAGGTTGCTCCTGGATTTTC                   ]


>consensus_6249#0 TACTAGTCGAGTCGTCTTCATCTTCGAGAAGGGAGAAATTTCAGAGAGATTTTTTATTTA TTTATTTTTGGATTTTGGGATCGGCGGCCGACGCTGTCGAGTACCGGAGTAGGGGAGCTC GCCGGAGTAAGCTCTTCTCAGGCTGTGCGGGGGTGGCGGAGGGCGGCGCGGCGCGGCGAG GGGGCATGGACACGATGAGGGGGGCGCTGGAGCGGGCGAGGATGCTGGTGGGGATGGAGG TGGACGAGGAGTCGGCGCCGGAGGAGCAGTCCTTCTTCGACGACGTCACCCGCAACTGCG CCCTCACCACCACCCAGAGGCTGTACGGCTTCGCGATATGCTTGGCTGCCGGATTGACGT GCACCTTCTTGTCAATGCTTGTTTTCTTCAATCCTGTGAAATTCGGGGTAACATTCACCC TTGGCAATTTGATGGCACTTGGAAGTACAGCGTTTCTTATAGGTCCCAAAAGGCAATTTG ACATGATGCTTGATTCTGTGCGGATATATGCAACTGCTGTATACATTGCAAGCATCATAA TTGCTCTGTTCTGTGCTCTCTTTGTGCACAGCAAGCTGCTGACTCTACTTGCCATTATCT TGGAATTTGGTGCTCTTGTTTGGTACAGTCTAAGCTATATACCCTTTGCACGCTCGGTTG TTTCGAAGGTGATGACGTCTTGCTTCGACACTGAATTCTAGAATGACCATCCTGATCTAC ATGTTGTTGCTGGACGCATAGATGATATATCTGTAATATACTGTGTATTTTGATGGAGAA GTGGAGTGGGGGTCATCTTCTCCGATTAGCCTGTGTAGTCATTCTGATGTTGTGAAGACA CACGGATTTGTGCGTCTTATGCTCAGAGATCATGTCATCTTTTCCTCACTTCCCCCCCTT CTTCCCCACATTTGTACATGGTAACCACTTACACTCCGCATTCGAACGTTTACTGTGCAG TTTGTTTGGATTGTCCTAGGTTGCTCCTGGATTTTCCTGCTTCTCAGAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)