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Oryza sativa
cluster # 6284 cluster # 6284       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6284#0 length = 2597 sequences # 4  

consensusID : consensus_6284#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2597
fasta sequence
                              [TCCTCCCTGTGCGGGAACAGTGGCTACCAAAAGCGGCAGAAGCCGCGGCAAGGCAAGGCCCCCGGCCCCGCCACGCCACGGTGGTGGAGCCCGGAGCCCCCCCTCCTTCTCCCTCCTCCTCTCGTCGCTTCCGCCTTGGCTCGTCTTGTGCCTACGCGAGAGCCAGAGATTGGGGGGGAAGGTTGCATTCATTGATGCCGCCGCGGCGCCGCTGCTGCTTTTAACGCGCTCGTCGTCGGCGTCGTCGGCTGCCCTCCACCGCAATCAAGGCCAATTTGGCGCGCGGCGAGGAGGAGGAGGGAGGAGGAGATGGGGATTGACCTGAACACGGTGGAGGAGGAAGCGGAGGAGGGGGCGGCGTCGAGCTGCGCGCGGACGCGGCGACGGACGAGGTGTACGCGCGGCTCGCGTTGGTGGCGGAGGGCGAGATGTTGCAGCGGAACTTCCGCGAGGGTGGAGGTGAAGATGGTGCAGGGGAGATGGAGGGTTGTGATGCAGAAAAGAAGCCCCGGATGCCACACATGTTCTGCAAAACTCTCACAGCATCTGATACAAGCACCCATGGAGGTTTCTCTGTTCCTCGCCGGGCTGCAGAGGACTGTTTCCCACCTTTGGACTATAAGACAGTTAGACCTTCTCAAGAGCTGATTGCCGTGGACTTACATGGCACACAATGGAAGTTCAGGCATATTTATAGAGGCCAGCCTCGTAGGCATCTTCTAACGATTGGATGGAGCTCATTTGTCAATAGGAAAAAACTAGTCTCAGGGGATGCTGTCTTGTTTCTTAGAGGTGATGATGGCCGACTAAGATTGGGTGTAAGGAGAGCAGTTCAACTTAGAAATGAGGCCCTCTTTGAACCTGTCAACAGCAGCGATTCAAAGCTACGCATTCTATCTTCTGTTGCCAGTTCCTTGGAAAATAAAAGTGTTTTCCACATTTGTTTCAACCCAAGGAGTGGTGCGTCAGAATTCATTGTACCGTATTGGAGATTATTGAAGAGCCTGAACCATCCATTTTCCATTGGAATGAGGTTCAGAGTTTGCTATGAGAGTGAAGATGCTAATGAGAGGTCCGCTGGATTAATTTCAGGCATTAGTGAAGTTGACCCCATAAGATGGCCTGGATCAAGATGGAAATGCCTACTGGTAAGATGGGATGATAGTACAGATAGCAGCCACCAAAACAGAGTTTCTCCATGGGAGATCGAGAGAGTTGGTGGCAGTGTCTCGGTTACCCATTCCTTGTCATCTGGGTCTAAGCGAACCAAATTGCACTTTCCTCAAGGCAGTTTGGATACTCCATTTCTTAATGGAAATGGTCACCCGGACTCCATGGGAACTGAAAATTTCCACAGGGTCTTGCAAGGTCAAGAATTTAGGGGTTCTAGGTCCCATGGTGTTGTATGCTCTGAATCACCTGGTGTACCAAACTTTCAATCTCCTGACAATAGGAGATTTTCTGCTGATATGCGGGGCTACATGATGCCAGCAAGTGGGCCCCCACAGCGGAACACAGAGTTTACTTATCAGCCCATAGGCTTCAGTGAGTCTCTTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATGTCACAAGTAGTTCCTTTGTTCCGAGGAGCTACTTTTGGCGCTCGTACACAGAATGACAGAGTTGTCTCTGCTAATTCTGTGCATAGATCAGCTGCACAGAGTGGATTGCTAGCTTCAACTCTAGGGCATCCCATCTCGCAGTTTACTCTGTCATCGTCAAAGGTATCTTCTCCCTCGTCGGTTCTGATGTTTAACCAAGCGACAGCTCCAAATCATGAAACAGTAAGCGGAACCAACAACAAAGGTATGCATGTCAGCCAGTTTGCTTCCCAGGAGATGCTCTCAGAAACTGTAACCTGGCCCGGCACACAACGTCAAACGCCGAGCGAAATCACGAGCAACCAGTTCGCCCTGGCGAGAATCCCAGCTCCTCCAAGCGGAGCTGAATCCGGATTGCCCAAGAGGGATGCCGGGAGAAGCAGCTGCAGACTGTTTGGCTTCTCCCTGACAGGCAACATGCTGGGAGAAGATGGAGAAGGCCTAGATGATGGAGCCATTGAAGCTGGTTGCGAAAACCCGCCCGTGCTGGAGCTGTTTGGGCACAGCCATTCTACTCCCGGTGCTCTTCATGCCCTGTGTGCTGCTGCTCCCCTGGGAATGTGATGCTGCTGCAGTACTGATGGTTTGCTCTGGGGAAATGGTCGTTGCATCAAGCTACCTAGCTGAAACAAACTGAATAATGTGTTAGCTACTTCCTAGATTTCTTCGGCACATTCTTGTAAGGATTGCAGCGGCGCCATTTGTATGTTGGTGCCACATGATGCATGTAAGACTGTAACTGTACCTTGAAATTTCGGCTGTTTGTCCGTAGCTTATGACATGAAGACTATGCAGAAGCAGATCCTCGAACTTAACTACACGTAGCATGCTGTATGACTATACGAGTCAACTGCACGTGCAGTTAAGTTGGAGTATCCTGATGGTGTTGTTTTGACAGTTGTGAAGCTAGGCCGCTAGGGTGTTACTTTTCAGCTACTTCACCGAATTATTATTGCAAATTATTTATTT]

[+] EMBL AK067927             [TCCTCCCTGTGCGGGAACAGTGGCTACCAAAAGCGGCAGAAGCCGCGGCAAGGCAAGGCCCCCGGCCCCGCCACGCCACGGTGGTGGAGCCCGGAGCCCCCCCTCCTTCTCCCTCCTCCTCTCGTCGCTTCCGCCTTGGCTCGTCTTGTGCCTACGCGAGAGCCAGAGATTGGGGGGGAAGGTTGCATTCATTGATGCCGCCGCGGCGCCGCTGCTGCTTTTAACGCGCTCGTCGTCGGCGTCGTCGGCTGCCCTCCACCGCAATCAAGGCCAATTTGGCGCGCGGCGAGGAGGAGGAGGGAGGAGGAGATGGGGATTGACCTGAACACGGTGGAGGAGGAAGCGGAGGAGGGGGCGGCGTCGAGCTGCGCGCGGACGCGGCGACGGACGAGGTGTACGCGCGGCTCGCGTTGGTGGCGGAGGGCGAGATGTTGCAGCGGAACTTCCGCGAGGGTGGAGGTGAAGATGGTGCAGGGGAGATGGAGGGTTGTGATGCAGAAAAGAAGCCCCGGATGCCACACATGTTCTGCAAAACTCTCACAGCATCTGATACAAGCACCCATGGAGGTTTCTCTGTTCCTCGCCGGGCTGCAGAGGACTGTTTCCCACCTTTGGACTATAAGACAGTTAGACCTTCTCAAGAGCTGATTGCCGTGGACTTACATGGCACACAATGGAAGTTCAGGCATATTTATAGAGGCCAGCCTCGTAGGCATCTTCTAACGATTGGATGGAGCTCATTTGTCAATAGGAAAAAACTAGTCTCAGGGGATGCTGTCTTGTTTCTTAGAGGTGATGATGGCCGACTAAGATTGGGTGTAAGGAGAGCAGTTCAACTTAGAAATGAGGCCCTCTTTGAACCTGTCAACAGCAGCGATTCAAAGCTACGCATTCTATCTTCTGTTGCCAGTTCCTTGGAAAATAAAAGTGTTTTCCACATTTGTTTCAACCCAAGGAGTGGTGCGTCAGAATTCATTGTACCGTATTGGAGATTATTGAAGAGCCTGAACCATCCATTTTCCATTGGAATGAGGTTCAGAGTTTGCTATGAGAGTGAAGATGCTAATGAGAGGTCCGCTGGATTAATTTCAGGCATTAGTGAAGTTGACCCCATAAGATGGCCTGGATCAAGATGGAAATGCCTACTGGTAAGATGGGATGATAGTACAGATAGCAGCCACCAAAACAGAGTTTCTCCATGGGAGATCGAGAGAGTTGGTGGCAGTGTCTCGGTTACCCATTCCTTGTCATCTGGGTCTAAGCGAACCAAATTGCACTTTCCTCAAGGCAGTTTGGATACTCCATTTCTTAATGGAAATGGTCACCCGGACTCCATGGGAACTGAAAATTTCCACAGGGTCTTGCAAGGTCAAGAATTTAGGGGTTCTAGGTCCCATGGTGTTGTATGCTCTGAATCACCTGGTGTACCAAACTTTCAATCTCCTGACAATAGGAGATTTTCTGCTGATATGCGGGGCTACATGATGCCAGCAAGTGGGCCCCCACAGCGGAACACAGAGTTTACTTATCAGCCCATAGGCTTCAGTGAGTCTCTTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATGTCACAAGTAGTTCCTTTGTTCCGAGGAGCTACTTTTGGCGCTCGTACACAGAATGACAGAGTTGTCTCTGCTAATTCTGTGCATAGATCAGCTGCACAGAGTGGATTGCTAGCTTCAACTCTAGGGCATCCCATCTCGCAGTTTACTCTGTCATCGTCAAAGGTATCTTCTCCCTCGTCGGTTCTGATGTTTAACCAAGCGACAGCTCCAAATCATGAAACAGTAAGCGGAACCAACAACAAAGGTATGCATGTCAGCCAGTTTGCTTCCCAGGAGATGCTCTCAGAAACTGTAACCTGGCCCGGCACACAACGTCAAACGCCGAGCGAAATCACGAGCAACCAGTTCGCCCTGGCGAGAATCCCAGCTCCTCCAAGCGGAGCTGAATCCGGATTGCCCAAGAGGGATGCCGGGAGAAGCAGCTGCAGACTGTTTGGCTTCTCCCTGACAGGCAACATGCTGGGAGAAGATGGAGAAGGCCTAGATGATGGAGCCATTGAAGCTGGTTGCGAAAACCCGCCCGTGCTGGAGCTGTTTGGGCACAGCCATTCTACTCCCGGTGCTCTTCATGCCCTGTGTGCTGCTGCTCCCCTGGGAATGTGATGCTGCTGCAGTACTGATGGTTTGCTCTGGGGAAATGGTCGTTGCATCAAGCTACCTAGCTGAAACGAACTGAATAATGTGTTAGCTACTTCCTAGATTTCTTCGGCACATTCTTGTAAGGATTGCAGCGGCGCCATTTGTATGTTGGTGCCACATGATGCATGTAAGACTGTAACTGTACCTTGAAATTTCGGCTGTTTGTCCGTAGCTTATGACATGAAGACTATGCAGAAGCAGATCCTCGAACTTAACTACACGTAGCATGCTGTATGACTATACGAGTCAACTGCACGTGCAGTTAAGTTGGAGTATCCTGATGGTGTTGTTTTGACAGTTGTGAAGCTAGGCCGCTAGGGTGTTACTTTTCAGCTACTTCACCGAATTATTATTGCAAATTATTTATTT]
[+] EMBL AK058446             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGAGCCTGAACCATCCATTTTCCATTGGAATGAGGTTCAGAGTTTGCTATGAGAGTGAAGATGCTAATGAGAGGTCCGCTGGATTAATTTCAGGCATTAGTGAAGTTGACCCCATAAGATGGCCTGGATCAAGATGGAAATGCCTACTGGTAAGATGGGATGATAGTACAGATAGCAGCCACCAAAACAGAGTTTCTCCATGGGAGATCGAGAGAGTTGGTGGCAGTGTCTCGGTTACCCATTCCTTGTCATCTGGGTCTAAGCGAACCAAATTGCACTTTCCTCAAGGCAGTTTGGATACTCCATTTCTTAATGGAAATGGTCACCCGGACTCCATGGGAACTGAAAATTTCCACAGGGTCTTGCAAGGTCAAGAATTTAGGGGTTCTAGGTCCCATGGTGTTGTATGCTCTGAATCACCTGGTGTACCAAACTTTCAATCTCCTGACAATAGGAGATTTTCTGCTGATATGCGGGGCTACATGATGCCAGCAAGTGGGCCCCCACAGCGGAACACAGAGTTTACTTATCAGCCCATAGGCTTCAGTGAGTCTCTTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATGTCACAAGTAGTTCCTTTGTTCCGAGGAGCTACTTTTGGCGCTCGTACACAGAATGACAGAGTTGTCTCTGCTAATTCTGTGCATAGATCAGCTGCACAGAGTGGATTGCTAGCTTCAACTCTAGGGCATCCCATCTCGCAGTTTACTCTGTCATCGTCAAAGGTATCTTCTCCCTCGTCGGTTCTGATGTTTAACCAAGCGACAGCTCCAAATCATGAAACAGTAAGCGGAACCAACAACAAAGGTATGCATGTCAGCCAGTTTGCTTCCCAGGAGATGCTCTCAGAAACTGTAACCTGGCCCGGCACACAACGTCAAACGCCGAGCGAAATCACGAGCAACCAGTTCGCCCTGGCGAGAATCCCAGCTCCTCCAAGCGGAGCTGAATCCGGATTGCCCAAGAGGGATGCCGGGAGAAGCAGCTGCAGACTGTTTGGCTTCTCCCTGACAGGCAACATGCTGGGAGAAGATGGAGAAGGCCTAGATGATGGAGCCATTGAAGCTGGTTGCGAAAACCCGCCCGTGCTGGAGCTGTTTGGGCACAGCCATTCTACTCCCGGTGCTCTTCATGCCCTGTGTGCTGCTGCTCCCCTGGGAATGTGATGCTGCTGCAGTACTGATGGTTTGCTCTGGGGAAATGGTCGTTGCATCAAGCTACCTAGCTGAAACAAACTGAATAATGTGTTAGCTACTTCCTAGATTTCTTCGGCACATTCTTGTAAGGATTGCAGCGGCGCCATTTGTATGTTGGTGCCACATGATGCATGTAAGACTGTAACTGTACCTTGAAATTTCGGCT                                                                                                                                                                                                                 ]
[+] EMBL CF311278             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATCAGCCCATAGGCTTCAGTGAGTCTCTTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATGTCACAAGTAGTTCCTTTGTTCCGAGGAGCTACTTTTGGCGCTCGTACACAGAATGACAGAGTTGTCTCTGCTAATTCTGTGCATAGATCAGCTGCACAGAGTGGATTGCTAGCTTCAACTCTAGGGCATCCCATCTCGCAGTTTACTCTGTCATCGTCAAAGGTATCTTCTCCCTCGTCGGTTCTGATGTTTAACCAAGCGACAGCTCCAAATCATGAAACAGTAAGCGGACCCAACAACAAAGGTATGCATGTCAGCCAGTTTGCTTCCCAGGAGATGCTCTCAGAAACTGTAACCTGGCCCGGCACACAACGTCAAACGCCGAGCGAAATCACGAGCAACCAGTTCGCCCTGGCGAGAATCCCAGCTCCTCCAAGCGGAGCTGAATCCGGATTGCCCAAGAGGGATGCCGGGAGAAGCAGCTGCAGACTGTTTGGCTTCTCCCTGACAGGCAACATGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF323703             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    agGGTATCTTCTCCCTCGTCGGTTCTGATGTTTAACCAAGCGACAGCTCCAAATCATGAAACAGTAAGCGGAACCAACAACAAAGGTATGCATGTCAGCCAGTTTGCTTCCCAGGAGATGCTCTCAGAAACTGTAACCTGGCCCGGCACACAACGTCAAACGCCGAGCGAAATCACGAGCAACCAGTTCGCCCTGGCGAGAATCCCAGCTCCTCCAAGCGGAGCTGAATCCGGATTGCCCAAGAGGGATGCCGGGAGAAGCAGCTGCAGACTGTTTGGCTTCTCCCTGACAGGCAACATGCTGGGAGAAGATGGAGAAGGCCTAGATGATGGAGCCATTGAAGCTGGTTGCGAAAACCCGCCCGTGCTGGAGCTGTTTGGGCACAGCCATTCTACTCCCGGTGCTCTTCATGCCCTGTGTGCTGCTGCTCCCCTGNGAATGTGATGCTGCTGCAGTACTGATGGTTTGCTCTGGGGAAATGGTCGTTGCATCAAGCTACCTAGCTGAAACAAACTGAATAATGTGTTA                                                                                                                                                                                                                                                                                                                                 ]


>consensus_6284#0 TCCTCCCTGTGCGGGAACAGTGGCTACCAAAAGCGGCAGAAGCCGCGGCAAGGCAAGGCC CCCGGCCCCGCCACGCCACGGTGGTGGAGCCCGGAGCCCCCCCTCCTTCTCCCTCCTCCT CTCGTCGCTTCCGCCTTGGCTCGTCTTGTGCCTACGCGAGAGCCAGAGATTGGGGGGGAA GGTTGCATTCATTGATGCCGCCGCGGCGCCGCTGCTGCTTTTAACGCGCTCGTCGTCGGC GTCGTCGGCTGCCCTCCACCGCAATCAAGGCCAATTTGGCGCGCGGCGAGGAGGAGGAGG GAGGAGGAGATGGGGATTGACCTGAACACGGTGGAGGAGGAAGCGGAGGAGGGGGCGGCG TCGAGCTGCGCGCGGACGCGGCGACGGACGAGGTGTACGCGCGGCTCGCGTTGGTGGCGG AGGGCGAGATGTTGCAGCGGAACTTCCGCGAGGGTGGAGGTGAAGATGGTGCAGGGGAGA TGGAGGGTTGTGATGCAGAAAAGAAGCCCCGGATGCCACACATGTTCTGCAAAACTCTCA CAGCATCTGATACAAGCACCCATGGAGGTTTCTCTGTTCCTCGCCGGGCTGCAGAGGACT GTTTCCCACCTTTGGACTATAAGACAGTTAGACCTTCTCAAGAGCTGATTGCCGTGGACT TACATGGCACACAATGGAAGTTCAGGCATATTTATAGAGGCCAGCCTCGTAGGCATCTTC TAACGATTGGATGGAGCTCATTTGTCAATAGGAAAAAACTAGTCTCAGGGGATGCTGTCT TGTTTCTTAGAGGTGATGATGGCCGACTAAGATTGGGTGTAAGGAGAGCAGTTCAACTTA GAAATGAGGCCCTCTTTGAACCTGTCAACAGCAGCGATTCAAAGCTACGCATTCTATCTT CTGTTGCCAGTTCCTTGGAAAATAAAAGTGTTTTCCACATTTGTTTCAACCCAAGGAGTG GTGCGTCAGAATTCATTGTACCGTATTGGAGATTATTGAAGAGCCTGAACCATCCATTTT CCATTGGAATGAGGTTCAGAGTTTGCTATGAGAGTGAAGATGCTAATGAGAGGTCCGCTG GATTAATTTCAGGCATTAGTGAAGTTGACCCCATAAGATGGCCTGGATCAAGATGGAAAT GCCTACTGGTAAGATGGGATGATAGTACAGATAGCAGCCACCAAAACAGAGTTTCTCCAT GGGAGATCGAGAGAGTTGGTGGCAGTGTCTCGGTTACCCATTCCTTGTCATCTGGGTCTA AGCGAACCAAATTGCACTTTCCTCAAGGCAGTTTGGATACTCCATTTCTTAATGGAAATG GTCACCCGGACTCCATGGGAACTGAAAATTTCCACAGGGTCTTGCAAGGTCAAGAATTTA GGGGTTCTAGGTCCCATGGTGTTGTATGCTCTGAATCACCTGGTGTACCAAACTTTCAAT CTCCTGACAATAGGAGATTTTCTGCTGATATGCGGGGCTACATGATGCCAGCAAGTGGGC CCCCACAGCGGAACACAGAGTTTACTTATCAGCCCATAGGCTTCAGTGAGTCTCTTGGAT TCCCAGAGGTCTTGCAAGGTCAAGAAATGTCACAAGTAGTTCCTTTGTTCCGAGGAGCTA CTTTTGGCGCTCGTACACAGAATGACAGAGTTGTCTCTGCTAATTCTGTGCATAGATCAG CTGCACAGAGTGGATTGCTAGCTTCAACTCTAGGGCATCCCATCTCGCAGTTTACTCTGT CATCGTCAAAGGTATCTTCTCCCTCGTCGGTTCTGATGTTTAACCAAGCGACAGCTCCAA ATCATGAAACAGTAAGCGGAACCAACAACAAAGGTATGCATGTCAGCCAGTTTGCTTCCC AGGAGATGCTCTCAGAAACTGTAACCTGGCCCGGCACACAACGTCAAACGCCGAGCGAAA TCACGAGCAACCAGTTCGCCCTGGCGAGAATCCCAGCTCCTCCAAGCGGAGCTGAATCCG GATTGCCCAAGAGGGATGCCGGGAGAAGCAGCTGCAGACTGTTTGGCTTCTCCCTGACAG GCAACATGCTGGGAGAAGATGGAGAAGGCCTAGATGATGGAGCCATTGAAGCTGGTTGCG AAAACCCGCCCGTGCTGGAGCTGTTTGGGCACAGCCATTCTACTCCCGGTGCTCTTCATG CCCTGTGTGCTGCTGCTCCCCTGGGAATGTGATGCTGCTGCAGTACTGATGGTTTGCTCT GGGGAAATGGTCGTTGCATCAAGCTACCTAGCTGAAACAAACTGAATAATGTGTTAGCTA CTTCCTAGATTTCTTCGGCACATTCTTGTAAGGATTGCAGCGGCGCCATTTGTATGTTGG TGCCACATGATGCATGTAAGACTGTAACTGTACCTTGAAATTTCGGCTGTTTGTCCGTAG CTTATGACATGAAGACTATGCAGAAGCAGATCCTCGAACTTAACTACACGTAGCATGCTG TATGACTATACGAGTCAACTGCACGTGCAGTTAAGTTGGAGTATCCTGATGGTGTTGTTT TGACAGTTGTGAAGCTAGGCCGCTAGGGTGTTACTTTTCAGCTACTTCACCGAATTATTA TTGCAAATTATTTATTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)