cluster # 6349

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6349 cluster # 6349 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6349#0 length = 1973 sequences # 4
consensusID : consensus_6349#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1973
fasta sequence
                              [GTGAGTTTTCCGGCGGTTCTATCTCTCCTCCAAGACAAATGGAATCCTCTCCCCTATGCACTCTCTATCCTCGCGGTGGAGTTCTCCAATACCTTGATCATCACCTATGCCCACCCTTGCCTTCTCTTTTCGCCCGGTCTGTCGGATCTGAGAATGATGGTGTTTGGGGATGTCCAATCCACTCAGTGGCGGTGGTTCTTGGGGCCGACAGATCTATGCATGAGAAGGCATAGGCTTGGCAGATCCATATTCTTCCTGCCGCCCCTTTCTTGCTCTGAGCTCAAAGCCTGCAGGAATGCAGGATGAGGATGCCACCGAGGCAACTTCTGTAGGGGATCATGGGCTCATGGCGGTGGCAGATCTGGTGGGTAGAGGACATTGTGGAATAGGAGAAATAGGATAGGGAAGCGGTGGCCGAGATGGAGAAGGGAGA-GGGGAGGCACAGTCGCGCAGATGGTTGATGACTGATNACGCATCAGTAGGCTGGTTGCTTGGCCATGGAAAGAAGGGGACAAATGTGATTGTTGCCACCACAGTTTCTATTGGAACAATACTACTAGTGGCTGTCTTTATTGCCGTTTTCATCTACAGGAGAAAGACAACGAAGACAATGATACCACCAGACAACACCGGCAATGAGGAGGACAATGACTATGTTGACCCACCGACCCTTAACTTAACAGTGTTGAGAGCTGCAACAAGGAACTTCTCGGCAGAAAATAAGCTGGGAGAAGGAGGTTTCGGAGAAGTTTTTAAGGGTATACTAGAAGACGGGGAAGAAGTAGCAGTGAAAAGGCTTTCGAAGACCTCCTCACAGGGGTTCCATGAATTGAAAAATGAACTCGTGCTAGCTGCCAAGCTCAAGCACAAAAATTTGGTGCGGTTACTAGGTGTTTGCTTGCAGGAAGAAAAACTACTTGTGTATGAATACATGCCTAATAGAAGCCTAGATACCATCCTTTTTGAGCCTGAGAAACGACAACAACTGGATTGGAGAAAAAGGTTTATGATCATTTGTGGAATTGCTCGAGGCCTTCTATATCTGCATGAAGAGTCTAGCCAGAAGATCATAGATAGGGATCTGAAGCCAAGCAATGTCCTATTAGATGAGGATATGATCCCCAAGATCTCAGATTTTGGCCTTGCCAGGGCTTTTGGTGGAGAGCAATCGAAGGATGTTACAAGACGCCCTGTTGGAACCCTTGGGTATATGTCGCCGGAGTATGCCTACTGCGGGCATGTCTCCACTAAGTCAGATATGTTCAGTTTTGGGGTCATTGTTCTTGAGATGGTGACCGGTAGAAGGAGCAACGGGATGTATGCTTCCACCAAGTCAGATACTTATGAATCTGCCGACTCCACGTCTCTACTGAGCTACGTATGGGAGAAATGGAGGACACGATCCCTAGCTGACGCAGTGGACGCGTCGTTGGGTGGCCGATACCCTGAAAACGAGGTCTTCAGCTGCGTGCAGATTGGGCTACTGTGTGTCCAAGAGAATCCAGCCGACAGGCCGGACATTTCAGCTGTGGTGCTAATGTTGAGCAGCAATTCCACGTCGCTGCAGACTCCTTCTAAGCCGGCGTTCTTCTTCGGCTCTGGCAGCATCGCAAGCTTGGATGCTGCTGGTGGACATGCATTTTTCGGTGGCCGGGGTTCAGAAGTTGCGGCCATCAGCAGTAACAAGATGTCCAGTAACCCCGTTTCAGAGAATGAGGTCACGATTTCAGAGCTTCAACCGAGGTAGAAGAACAAATGCGTC-TGCATCAATTGTCAGTATTCAGGACACTTGATGTCCCCCGAATATCGGTGGTAATATGGC-AATAATGTCCAACAGATAAGTTAGTGTTCAGCGTAT-AAATTATTACACTAAAGCCTCTCCAAATCTCTCTAAGAATGCATTCCCGGTATGAAACTAATGGAAAAGCTATAATGATATCGATTAGATCGCACATTTTGATATTGGAACTACT]

[+] EMBL C97478               [GTGAGTTTTCCGGCGGTTCTATCTCTCCTCCAAGACAAATGGAATCCTCTCCCCTATGCACTCTCTATCCTCGCGGTGGAGTTCTCCAATACCTTGATCATCACCTATGCCCACCCTTGCCTTCTCTTTTCGCCCGGTCTGTCGGATCTGAGAATGATGGTGTTTGGGGATGTCCAATCCACTCAGTGGCGGTGGTTCTTGGGGCCGACAGATCTATGCATGAGAAGGCATAGGCTTGGCAGATCCATATTCTTCCTGCCGCCCCTTTCTTGCTCTGAGCTCAAAGCCTGCAGGAATGCAGGATGAGGATGCCACCGAGGCAACTTCTGTAGGGGATCATGGGCTCATGGCGGTGGCAGATCTGGTGGGTAGAGGACATTGTGGAATAGGAGAAATAGGATAGGGAAGCGGTGGCCGAGATGGAGAAGGGAGA GGGGAGGCACAGTCGCGCAGATGGTTGATGACTGATNACGCATCAGTAGGCTGGTTGCTTGGCCATGGAAAGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK073556             [                                                                   TCCTCGCGGTGGAGTTCTCCAATACCTTGATCATCACCTATGCCCACCCTTGCCTTCTCTTTTCGCCCGGTCTGTCGGATCTGAGAATGATGGTGTTTGGGGATGTCCAATCCACTCAGTGGCGGTGGTTCTTGGGGCCGACAGATCTATGCATGAGAAGGCATAGGCTTGGCAGATCCATATTCTTCCTGCCGCCCCTTTCTTGCTCTGAGCTCAAAGCCTGCAGGAATGCAGGATGAGGATGCCACCGAGGCAACTTCTGTAGGGGATCATGGGCTCATGGCGGTGGCAGATCTGGTGGGTAGAGGACATTGTGGAATAGGAGAAATAGGATAGGGAAGCGGTGGCCGAGATGGAGAAGGGAGAGGGGGAGGCACAGTCGCGCAGATGGTTGATGACTGATGACGCATCAGTAGGCTGGTTGCTTGGCCATGGAAAGAAGGGGACAAATGTGATTGTTGCCACCACAGTTTCTATTGGAACAATACTACTAGTGGCTGTCTTTATTGCCGTTTTCATCTACAGGAGAAAGACAACGAAGACAATGATACCACCAGACAACACCGGCAATGAGGAGGACAATGACTATGTTGACCCACCGACCCTTAACTTAACAGTGTTGAGAGCTGCAACAAGGAACTTCTCGGCAGAAAATAAGCTGGGAGAAGGAGGTTTCGGAGAAGTTTTTAAGGGTATACTAGAAGACGGGGAAGAAGTAGCAGTGAAAAGGCTTTCGAAGACCTCCTCACAGGGGTTCCATGAATTGAAAAATGAACTCGTGCTAGCTGCCAAGCTCAAGCACAAAAATTTGGTGCGGTTACTAGGTGTTTGCTTGCAGGAAGAAAAACTACTTGTGTATGAATACATGCCTAATAGAAGCCTAGATACCATCCTTTTTGAGCCTGAGAAACGACAACAACTGGATTGGAGAAAAAGGTTTATGATCATTTGTGGAATTGCTCGAGGCCTTCTATATCTGCATGAAGAGTCTAGCCAGAAGATCATAGATAGGGATCTGAAGCCAAGCAATGTCCTATTAGATGAGGATATGATCCCCAAGATCTCAGATTTTGGCCTTGCCAGGGCTTTTGGTGGAGAGCAATCGAAGGATGTTACAAGACGCCCTGTTGGAACCCTTGGGTATATGTCGCCGGAGTATGCCTACTGCGGGCATGTCTCCACTAAGTCAGATATGTTCAGTTTTGGGGTCATTGTTCTTGAGATGGTGACCGGTAGAAGGAGCAACGGGATGTATGCTTCCACCAAGTCAGATACTTATGAATCTGCCGACTCCACGTCTCTACTGAGCTACGTATGGGAGAAATGGAGGACACGATCCCTAGCTGACGCAGTGGACGCGTCGTTGGGTGGCCGATACCCTGAAAACGAGGTCTTCAGCTGCGTGCAGATTGGGCTACTGTGTGTCCAAGAGAATCCAGCCGACAGGCCGGACATTTCAGCTGTGGTGCTAATGTTGAGCAGCAATTCCACGTCGCTGCAGACTCCTTCTAAGCCGGCGTTCTTCTTCGGCTCTGGCAGCATCGCAAGCTTGGATGCTGCTGGTGGACATGCATTTTTCGGTGGCCGGGGTTCAGAAGTTGCGGCCATCAGCAGTAACAAGATGTCCAGTAACCCCGTTTCAGAGAATGAGGTCACGATTTCAGAGCTTCAACCGAGGTAGAAGAACAAATGCGTC TGCATCAATTGTCAGTATTCAGGACACTTGATGTCCCCCGAATATCGGTGGTAATATGGC AATAATGTCCAACAGATAAGTTAGTGTTCAGCGTAT AAATTATTACACTAAAGCCTCTCCAAATCTCTCTAAGAATGCATTCCCGGTATGAAACTAATGGAAAAGCTATAATGATATCGATTAGATCGCACATTTTGATATTGGAACTACT]
[+] EMBL CA766923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCAAGCAATGTCCTATTAGATGAGGATATGATCCCCAAGATCTCAGATTTTGGCCTTGCCAGGGCTTTTGGTGGAGAGCAATCGAAGGATGTTACAAGACGCCCTGTTGGAACCCTTGGGTATATGTCGCCGGAGTATGCCTACTGCGGGCATGTCTCCACTAAGTCAGATATGTTCAGTTTTGGGGTCATTGTTCTTGAGATGGTGACCGGTAGAAGGAGCAACGGGATGTATGCTTCCACCAAGTCGGATACTTATGAATCTGCCGACTCCACGTCTCTACTGAGCTACGTATGGGAGAAATGGAGGACACGATCCCTAGCTGACGCAGTGGACGCGTCGTTGGGTGGCCGATACCCTGAAAACGAGGTCTTCAGCTGCGTGCAGATTGGGCTACTGTGTGTCCAAGAGAATCCAGCCGACAGGCCGGACATTTCAGCTGTGGTGCTAATGCTGAGCAGCAATTCCACGTCGCTGCAGACTCCTTCTAAGCCGGCGTTCTTCTTCGGCTCTGGCAGCATCGCAAACTTGGATGCTGCTGGTGGACATGCATTTTTCGGTGGCCGGGGTTCAGAAGTTGCGGNCATCAGCAGTAACAAGATGTCCAGTAACCCC        GAATGANGTCACGATTTCAGAGCTTCAACCGAGGTAGAAGAACAAATGCGTCTTGCATCAATTGTCAGTATTCAGGACACTTGATGTCCCCCGAATATCGGNGGTAATATGGC AATAATGTCCAACAGATAAGTTAGNGGTCAGCGGATNAAATTATTACACTAAAGCCT                                                                                               ]
[+] EMBL C97479               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGAGGTCTTNAGCTGCGTGCAGATTGGGCTACTGTGTGTCCAAGAGAATCCAGCCGACAGGCCGGACATTTCAGCTGTGGTGCTAATGTTGAGCAGCAATTCCACGTCGCTGCAGACTCCTTCTAAGCCGGCGTTCTTCTTCGGCTCTGGCAGCATCGCAAGCTTGGATGCTGCTGGTGGACATGCATTTTTCGGTGGCCGGGGTTCAGAAGTTGCGGCCATCAGCAGTAACAAGATGTCCAGTAACCCCGTTTCAGAGAATGAGGTCACGATTTCAGAGCTTCAACCGAGGTAGAAGAACAAATGCGTC TGCATCAATTGTCAGTATTCAGGACACTTGATGTCCCCCGAATATCGGTGGTAATATGGCNATTAATGTCCAACAGATAAGTTAGTGTTCAGCGTAT AAATTATTACACTAAAGCCTCTCCAAATCTCTCTAAGAATGCATTCCNGGTATGAAACTAATGGAAAAGCTATAATGATATCGATTNGATCGCACATTTTGATAaaaa       ]




>consensus_6349#0
GTGAGTTTTCCGGCGGTTCTATCTCTCCTCCAAGACAAATGGAATCCTCTCCCCTATGCA
CTCTCTATCCTCGCGGTGGAGTTCTCCAATACCTTGATCATCACCTATGCCCACCCTTGC
CTTCTCTTTTCGCCCGGTCTGTCGGATCTGAGAATGATGGTGTTTGGGGATGTCCAATCC
ACTCAGTGGCGGTGGTTCTTGGGGCCGACAGATCTATGCATGAGAAGGCATAGGCTTGGC
AGATCCATATTCTTCCTGCCGCCCCTTTCTTGCTCTGAGCTCAAAGCCTGCAGGAATGCA
GGATGAGGATGCCACCGAGGCAACTTCTGTAGGGGATCATGGGCTCATGGCGGTGGCAGA
TCTGGTGGGTAGAGGACATTGTGGAATAGGAGAAATAGGATAGGGAAGCGGTGGCCGAGA
TGGAGAAGGGAGAGGGGAGGCACAGTCGCGCAGATGGTTGATGACTGATNACGCATCAGT
AGGCTGGTTGCTTGGCCATGGAAAGAAGGGGACAAATGTGATTGTTGCCACCACAGTTTC
TATTGGAACAATACTACTAGTGGCTGTCTTTATTGCCGTTTTCATCTACAGGAGAAAGAC
AACGAAGACAATGATACCACCAGACAACACCGGCAATGAGGAGGACAATGACTATGTTGA
CCCACCGACCCTTAACTTAACAGTGTTGAGAGCTGCAACAAGGAACTTCTCGGCAGAAAA
TAAGCTGGGAGAAGGAGGTTTCGGAGAAGTTTTTAAGGGTATACTAGAAGACGGGGAAGA
AGTAGCAGTGAAAAGGCTTTCGAAGACCTCCTCACAGGGGTTCCATGAATTGAAAAATGA
ACTCGTGCTAGCTGCCAAGCTCAAGCACAAAAATTTGGTGCGGTTACTAGGTGTTTGCTT
GCAGGAAGAAAAACTACTTGTGTATGAATACATGCCTAATAGAAGCCTAGATACCATCCT
TTTTGAGCCTGAGAAACGACAACAACTGGATTGGAGAAAAAGGTTTATGATCATTTGTGG
AATTGCTCGAGGCCTTCTATATCTGCATGAAGAGTCTAGCCAGAAGATCATAGATAGGGA
TCTGAAGCCAAGCAATGTCCTATTAGATGAGGATATGATCCCCAAGATCTCAGATTTTGG
CCTTGCCAGGGCTTTTGGTGGAGAGCAATCGAAGGATGTTACAAGACGCCCTGTTGGAAC
CCTTGGGTATATGTCGCCGGAGTATGCCTACTGCGGGCATGTCTCCACTAAGTCAGATAT
GTTCAGTTTTGGGGTCATTGTTCTTGAGATGGTGACCGGTAGAAGGAGCAACGGGATGTA
TGCTTCCACCAAGTCAGATACTTATGAATCTGCCGACTCCACGTCTCTACTGAGCTACGT
ATGGGAGAAATGGAGGACACGATCCCTAGCTGACGCAGTGGACGCGTCGTTGGGTGGCCG
ATACCCTGAAAACGAGGTCTTCAGCTGCGTGCAGATTGGGCTACTGTGTGTCCAAGAGAA
TCCAGCCGACAGGCCGGACATTTCAGCTGTGGTGCTAATGTTGAGCAGCAATTCCACGTC
GCTGCAGACTCCTTCTAAGCCGGCGTTCTTCTTCGGCTCTGGCAGCATCGCAAGCTTGGA
TGCTGCTGGTGGACATGCATTTTTCGGTGGCCGGGGTTCAGAAGTTGCGGCCATCAGCAG
TAACAAGATGTCCAGTAACCCCGTTTCAGAGAATGAGGTCACGATTTCAGAGCTTCAACC
GAGGTAGAAGAACAAATGCGTCTGCATCAATTGTCAGTATTCAGGACACTTGATGTCCCC
CGAATATCGGTGGTAATATGGCAATAATGTCCAACAGATAAGTTAGTGTTCAGCGTATAA
ATTATTACACTAAAGCCTCTCCAAATCTCTCTAAGAATGCATTCCCGGTATGAAACTAAT
GGAAAAGCTATAATGATATCGATTAGATCGCACATTTTGATATTGGAACTACT
clustalw multiple alignements is not computed in this case