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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6358 cluster # 6358       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6358#0 length = 783 sequences # 4  

consensusID : consensus_6358#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 783
fasta sequence
                              [TCTTTTTTTTTTTTTTTTTTTGAACAAAAAAACAATTTCCAGCAATTTTGTAGTAGTAGCAAATGCTCCGGCTACATAAAACAGTACCAAAACAAGATAGTAAAATTTACTAGTCCATTAAGTAGACTCTATAGCTAAAGATCTAACAAATTTTGAATGCTAATTGATGAGTAATAAGACTAATTTATGCTTGAGCTGAACGACGACTTAAAATTTGATTCTTCACATTTTTATAGTACTCCTGCTCCTCGATGCTCATTGCACTAGTATCAGTCCTCAAAAGCTTATCTTCTTTTGTCATTCTCTTGAACTCGAACTTGTCTCTCTCCAAATCAATCCGCTTTTGCTCAAGTGCAAAAGCAATTTGGTACCTCTCCTCAAACTTTCGCTCCTTCTCCGCATCGGCCTCTTTCTTCTTATCCCATAGATAGTCTAAGGACTCTTTCCGTGATAGATCCGAGCGTTCGCGCATCTGTTGTTTCGCCTTCTTCCTCCCCATGGGTCTTCCCTCACCTACTGTATTCTCAGGATCAGCAGCCCTATTCTCATCAACATTACATGCAGGAGTAGATATCGCAGGAGAATCATTGGCGGTCTTCTTCTGCTTCTTGCTTGAAGTTTTACTAGCTGCCAGCTGATTCCGCTTATCATCCCACTTTGGCAGATTCTTTAAAATGTTGTAGCAATGCATGAACTGAAACTTCTTTTCCTCTTTCTTCTTGTACATCAGGCTTGCTTGCACATGCATGTCCTCATGATTGACACCACTCTGATTTCGATTCT]

[+] EMBL CB677460             [TCTTTTTTTTTTTTTTTTTTTGAACAAAAAAACAATTTCCAGCAATTTTGTAGTAGTAGCAAATGCTCCGGCTACATAAAACAGTACCAAAACAAGATAGTAAAATTTACTAGTCCATTAAGTAGACTCTATAGCTAAAGATCTAACAAATTTTGAATGCTAATTGATGAGTAATAAGACTAATTTATGCTTGAGCTGAACGACGACTTAAAATTTGATTCTTCACATTTTTATAGTACTCCTGCTCCTCGATGCTCATTGCACTAGTATCAGTCCTCAAAAGCTTATCTTCTTTTGTCATTCTCTTGAACTCGAACTTGTCTCTCTCCAAATCAATCCGCTTTTGCTCAAGTGCAAAAGCAATTTGGTACCTCTCCTCAAACTTTCGCTCCTTCTCCGCATCGGCCTCTTTCTTCTTATCCCATAGATAGTCTAAGGACTCTTTCCGTGATAGATCCGAGCGTTCGCGCATCTGTTGTTTCGCCTTCTTCCTCCCCATGGGTCTTCCCTCACCTACTGTATTCTCAGGATCAGCAGCCCTATTCTCATCAACATTACATGCAGGAGTAGATATCGCAGGAGAATCATTGGCGGGCTTCTTCTGCTTCTTGCTTGAAGTTTTACTAGCTGCCAGCTGATTCCGCTTATCATCCCACTTTGGCAGATTCTTTAAAATGTTGTAGCAATGCATGAACTGAAACTTCTTTTCCTCTTTCTTCTTGTACATCAGGCTTGCTTGCACATGCATGTCCTCATGATTGACACCACTCTGATTTCGA    ]
[+] EMBL CB653879             [          ccTTTTTTTTTGAACAAAAAAACAATTTCCAGCAATTTTGTAGTAGTAGCAAATGCTCCGGCTACATAAAACAGTACCAAAACAAGATAGTAAAATTTACTAGTCCATTAAGTAGACTCTATAGCTAAAGATCTAACAAATTTTGAATGCTAATTGATGAGTAATAAGACTAATTTATGCTTGAGCTGAACGACGACTTAGAATTTGATTCTTCACATTTTTATAGTACTCCTGCTCCTCGATGCTCATTGCACTAGTATCAGTCCTCAAAAGCTTATCTTCTTTTGTCATTCTCTTGAACTCGAACTTGTCTCTCTCCAAATCAATCCGCTTTTGCTCAAGTGCAAAAGCAATTTGGTACCTCTCCTCAAACTTTCGCTCCTTCTCCGCATCGGCCTCTTTCTTCTTATCCCATAGATAGTCTAAGGACTCTTTCCGTGATAGATCCGAGCGTTCGCGCATCTGTTGTTTCGCCTTCTTCCTCCCCATGGGTCTTCCCTCACCTACTGTATTCTCAGGATCAGCAGCCCTATTCTCATCAACATTACATGCAGGAGTAGATATCGCAGGAGAATCATTGGCGGTCTTCTTCTGCTTCTTGCTTGAAGTTTTACTAGCTGCCAGCTGATTCCGCTTATCATCCCACTTTGGCAGATTCTTTAAAATGTTGTAGCAATGCATGAACTGAAACTTCTTTTCCTCTTTCTTCTTGAACATCAGGCTTGCTT                                             ]
[+] EMBL CB669773             [                                                               TGCTCCGGCTACCTAAAACAGTACCAAAACAAGATAGTAAAATTTACTAGTCCATTAAGTAGACTCTATAGCTAAAGATCTAACAAATTTTGAATGCTAATTGATGAGTAATAAGACTAATTTATGCTTGAGCTGAACGACGACTTAAAATTTGATTCTTCACATTTTTATAGTACTCCTGCTCCTCGATGCTCATTGCACTAGTATCAGTCCTCAAAAGCTTATCTTCTTTTGTCATTCTCTTGAACTCGAACTTGTCTCTCTCCAAATCAATCCGCTTTTGCTCAAGTGCAAAAGCAATTTGGTACCTCTCCTCAAACTTTCGCTCCTTCTCCGCATCGGCCTCTTTCTTCTTATCCCATAGATAGTCTAAGGACTCTTTCCGTGATAGATCCGAGCGTTCGCGCATCTGTTGTTTCGCCTTCTTCCTCCCCATGGGTCTTCCCTCACCTACTGTATTCTCAGGATCAGCAGCCCTATTCTCATCAACATTACATGCAGGAGTAGATATCGCAGGAGAATCATTGGCGGTCTTCTTCTGCTTCTTGCTTGAAGTTTTACTAGCTGCCAGCTGATTCCGCTTATCATCCCACTTTGGCAGATTCTTTAAAATGTTGTAGCAATGCATGAACTGAAACTTCTTTTCCTCTTTCTTCTTGTACATCAGGCTTGCTTGCACATGCATGTCCTCATGATTGACACCACTCTGATTTCGATTCT]
[-] EMBL C93461               [                                                                              AAACNGTACCAAAACNAGATAGTAAAATTTACTAGTCCAGTAAGTAGACTCTATAGCTAAAGATCTAACAAAATTTGAATGCTAATTGATGAGTTATAAGACTAATTTATGCTTGAGCTGAACGACGACTTAGAATTTGATTCTTCACATTTTTATAGTACNCCTGCNCCACGATGCTCATTGCACTAGTATCAGTCCTNAANAGCTTANCNTCTTTTGTCATTCTCTTGNACTCccgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_6358#0 TCTTTTTTTTTTTTTTTTTTTGAACAAAAAAACAATTTCCAGCAATTTTGTAGTAGTAGC AAATGCTCCGGCTACATAAAACAGTACCAAAACAAGATAGTAAAATTTACTAGTCCATTA AGTAGACTCTATAGCTAAAGATCTAACAAATTTTGAATGCTAATTGATGAGTAATAAGAC TAATTTATGCTTGAGCTGAACGACGACTTAAAATTTGATTCTTCACATTTTTATAGTACT CCTGCTCCTCGATGCTCATTGCACTAGTATCAGTCCTCAAAAGCTTATCTTCTTTTGTCA TTCTCTTGAACTCGAACTTGTCTCTCTCCAAATCAATCCGCTTTTGCTCAAGTGCAAAAG CAATTTGGTACCTCTCCTCAAACTTTCGCTCCTTCTCCGCATCGGCCTCTTTCTTCTTAT CCCATAGATAGTCTAAGGACTCTTTCCGTGATAGATCCGAGCGTTCGCGCATCTGTTGTT TCGCCTTCTTCCTCCCCATGGGTCTTCCCTCACCTACTGTATTCTCAGGATCAGCAGCCC TATTCTCATCAACATTACATGCAGGAGTAGATATCGCAGGAGAATCATTGGCGGTCTTCT TCTGCTTCTTGCTTGAAGTTTTACTAGCTGCCAGCTGATTCCGCTTATCATCCCACTTTG GCAGATTCTTTAAAATGTTGTAGCAATGCATGAACTGAAACTTCTTTTCCTCTTTCTTCT TGTACATCAGGCTTGCTTGCACATGCATGTCCTCATGATTGACACCACTCTGATTTCGAT TCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)