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Oryza sativa
cluster # 6397 cluster # 6397       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6397#0 length = 2338 sequences # 3  
consensus_6397#1 length = 667 sequences # 1  

consensusID : consensus_6397#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2338
fasta sequence
                              [TCTCCTCCTCCTCCCACACTGCTGCGCGGCCGCCGCCGCCGCCGCCGCCTTCCGCATCGTCGCCGTCGATTTTGCGGAGCTCCAGTGGATGGAGGTGATGGATTCGGTGGCCGTGATGGAGGTCTCGCCGGTGCCGAAGCCGCCACTGGAGGCGGCGCTTGCGCTGCGCCGCAGCGTTCGGTGCTTGAACAGGACGCGCCGTCCCACTTACGTGGAGCAGGAGGAGCCCAAGGAGAGTGCTGGCCGGCGGCGCGGCGGCAAGAGGAAGCGGGAAGAGGAGAAGAAGGAGCCGGTGGCGCAGCACGCCATGAAGCCGGTCAGGATGGGCGATGCAGCCTCGGAGAGGAAGCCCTCCTCGGAGGGGAAGCCGATGCCCGCAATTGCGGCGGAGCCGGTTTCTTGTGCCGGGTTCGCACGACCTGCTGCCGAGGATGATGTCCTTGGCAACGGGAAGAGTGCGAAACTGCGGGTGAAGGAAACCTTGAGGGCATTCACCAGCCATTACCTTCACCTTGTCCAGGAGGAGCAGAAAAGAGCACAAGCGGTGTTACAGGAAGGCCAGAAGCGTCCATCAAAGCGGCCTGACTTGAAAGCCATTACAAAGATGCAAGAAAGCAATGCCGTGCTTTATCCAGAGAAGATAATAGGGGAACTACCTGGTGTTGATGTTGGGGATCAATTTTATTCTCGTGCCGAGATGGTTGTTTTGGGCATTCATAGTCATTGGCTGAATGGCATTGATTATATGGGAATGAAATATCAGGGAAAGGAGGAGTATGCAAACCTAACTTTCCCACTGGCAACTTGTATTGTCATGTCGGGAATATATGAAGATGATCTTGATAAGGCAGATGAAATTATTTATACTGGTCAAGGAGGAAATGATTTACTCGGTAATCATCGCCAAATTGGCTCTCAACAACTGCAACGTGGAAATTTGGCATTGAAGTACAGTAAGGATAATGGCAATCCCATAAGAGTTATCCGAGGACATATATCAAAGAATAGCTACACTGGGAAGGTCTACACCTATGATGGGCTGTACAAGGTTGTAGATGACTGGGTGCAGAATGGAGTACAAGGGCACGTTGTTTTCAAATATAAATTAAAGCGGCTTGAGGGACAGCCATCACTGACAACTTCTGAGGTCCGATTTACTCGTGCTGAAGCTCCCACCACGATTTCGGAATTACCTGGGTTGGTTTGTGATGACATATCTGGTGGGCAGGAGAATCTTCCTATTCCTGCTACTAATTTGGTTGATGACCCACCTGTTCCTCCAACTGGTTTTGTGTACTCCAAATCTCTAAAAATTCCAAAGGGCATCAAGATTCCATCTTATTGTAATGGCTGTGACTGTGAAGGAGATTGCGCAAACAACAAAAACTGCTCATGCGCGCAGCGCAATGGTTCTGATTTACCTTATGTATCACACAAGAACATTGGCAGGTTGGTGGAGCCCAAAGCTATTGTATTTGAATGTGGTGCTAATTGCAGCTGCAACAACAACTGTGTAAATAGAACATCTCAGAAAGGTCTGCAGTATCGCTTGGAGGTATTTAAGACAGCTTCAAAAGGCTGGGGTGTCAGGACTTGGGATACTATCCTCCCTGGGGCTCCCATCTGTGAGTACACTGGTGTGCTGAGGAGGACTGAAGAAGTAGATGGTTTGCTGCAGAACAATTACATATTTGATATTGATTGTCTTCAAACTATGAAGGGTCTGGATGGAAGAGAGAAAAGGGCTGGCTCTGACATGCATCTGCCGTCTCTTCATGCGGAGAATGATTCAGATCCACCTGCACCAGAGTATTGCATTGATGCTGGCTCTATTGGCAACTTTGCAAGGTTTATAAACCACAGCTGCGAGCCTAACCTTTTTGTCCAGTGTGTCTTGAGCTCCCATAATGATGTTAAGCTGGCAAAGGTGACGCTCTTTGCTGCTGACACTATACTTCCTCTTCAGGAGCTTTCATATGATTATGGCTATGT-CTTGGACAGTGTTGTTGGG-CCTGATGGAAATATTGTCAAGCTGCCTTGCTTCTGTGGTGCACCGTACTGCCGGAAGCGACTTTATTAGATCTGCACCTGTTTGCATCTATTTGGAATATGAACCACTCTAGACTATAATATATAGTAGTATATGTATTCAGTGCCAGGCGTGTAAATGGCATGCTGGAAACACTATGATATTTTGCAGAAGATGAGCATTCTGATTTTTTTGTAGAGGTCATGTTGGGGATGCTATGATATTTAGCAAAAGAATAGCATTCTATTTTTGTGTAGAGAACATGCTATGATATCTTATAAACAATTAACCTATATATCTAAGTGCTGA]

[+] EMBL AK106700             [TCTCCTCCTCCTCCCACACTGCTGCGCGGCCGCCGCCGCCGCCGCCGCCTTCCGCATCGTCGCCGTCGATTTTGCGGAGCTCCAGTGGATGGAGGTGATGGATTCGGTGGCCGTGATGGAGGTCTCGCCGGTGCCGAAGCCGCCACTGGAGGCGGCGCTTGCGCTGCGCCGCAGCGTTCGGTGCTTGAACAGGACGCGCCGTCCCACTTACGTGGAGCAGGAGGAGCCCAAGGAGAGTGCTGGCCGGCGGCGCGGCGGCAAGAGGAAGCGGGAAGAGGAGAAGAAGGAGCCGGTGGCGCAGCACGCCATGAAGCCGGTCAGGATGGGCGATGCAGCCTCGGAGAGGAAGCCCTCCTCGGAGGGGAAGCCGATGCCCGCAATTGCGGCGGAGCCGGTTTCTTGTGCCGGGTTCGCACGACCTGCTGCCGAGGATGATGTCCTTGGCAACGGGAAGAGTGCGAAACTGCGGGTGAAGGAAACCTTGAGGGCATTCACCAGCCATTACCTTCACCTTGTCCAGGAGGAGCAGAAAAGAGCACAAGCGGTGTTACAGGAAGGCCAGAAGCGTCCATCAAAGCGGCCTGACTTGAAAGCCATTACAAAGATGCAAGAAAGCAATGCCGTGCTTTATCCAGAGAAGATAATAGGGGAACTACCTGGTGTTGATGTTGGGGATCAATTTTATTCTCGTGCCGAGATGGTTGTTTTGGGCATTCATAGTCATTGGCTGAATGGCATTGATTATATGGGAATGAAATATCAGGGAAAGGAGGAGTATGCAAACCTAACTTTCCCACTGGCAACTTGTATTGTCATGTCGGGAATATATGAAGATGATCTTGATAAGGCAGATGAAATTATTTATACTGGTCAAGGAGGAAATGATTTACTCGGTAATCATCGCCAAATTGGCTCTCAACAACTGCAACGTGGAAATTTGGCATTGAAGTACAGTAAGGATAATGGCAATCCCATAAGAGTTATCCGAGGACATATATCAAAGAATAGCTACACTGGGAAGGTCTACACCTATGATGGGCTGTACAAGGTTGTAGATGACTGGGTGCAGAATGGAGTACAAGGGCACGTTGTTTTCAAATATAAATTAAAGCGGCTTGAGGGACAGCCATCACTGACAACTTCTGAGGTCCGATTTACTCGTGCTGAAGCTCCCACCACGATTTCGGAATTACCTGGGTTGGTTTGTGATGACATATCTGGTGGGCAGGAGAATCTTCCTATTCCTGCTACTAATTTGGTTGATGACCCACCTGTTCCTCCAACTGGTTTTGTGTACTCCAAATCTCTAAAAATTCCAAAGGGCATCAAGATTCCATCTTATTGTAATGGCTGTGACTGTGAAGGAGATTGCGCAAACAACAAAAACTGCTCATGCGCGCAGCGCAATGGTTCTGATTTACCTTATGTATCACACAAGAACATTGGCAGGTTGGTGGAGCCCAAAGCTATTGTATTTGAATGTGGTGCTAATTGCAGCTGCAACAACAACTGTGTAAATAGAACATCTCAGAAAGGTCTGCAGTATCGCTTGGAGGTATTTAAGACAGCTTCAAAAGGCTGGGGTGTCAGGACTTGGGATACTATCCTCCCTGGGGCTCCCATCTGTGAGTACACTGGTGTGCTGAGGAGGACTGAAGAAGTAGATGGTTTGCTGCAGAACAATTACATATTTGATATTGATTGTCTTCAAACTATGAAGGGTCTGGATGGAAGAGAGAAAAGGGCTGGCTCTGACATGCATCTGCCGTCTCTTCATGCGGAGAATGATTCAGATCCACCTGCACCAGAGTATTGCATTGATGCTGGCTCTATTGGCAACTTTGCAAGGTTTATAAACCACAGCTGCGAGCCTAACCTTTTTGTCCAGTGTGTCTTGAGCTCCCATAATGATGTTAAGCTGGCAAAGGTGACGCTCTTTGCTGCTGACACTATACTTCCTCTTCAGGAGCTTTCATATGATTATGGCTATGT CTTGGACAGTGTTGTTGGG CCTGATGGAAATATTGTCAAGCTGCCTTGCTTCTGTGGTGCACCGTACTGCCGGAAGCGACTTTATTAGATCTGCACCTGTTTGCATCTATTTGGAATATGAACCACTCTAGACTATAATATATAGTAGTATATGTATTCAGTGCCAGGCGTGTAAATGGCATGCTGGAAACACTATGATATTTTGCAGAAGATGAGCATTCTGATTTTTTTGTAGAGGTCATGTTGGGGATGCTATGATATTTAGCAAAAGAATAGCATTCTATTTTTGTGTAGAGAACATGCTATGATATCTTATAAACAATTAACCTATATATCTAAGTGCTGA]
[+] EMBL CA764841             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGGAGAATCTTCCTATTCCTGCTACTAATTTGGTTGATGACCCACCTGTTCCTCCAACTGGTTTTGTGTACTCCAAATCTCTAAAAATTCCAAAGGGCATCAAGATTCCATCTTATTGTAATGGCTGTGACTGTGAAGGAGATTGCGCAAACAACAAAAACTGCTCATGCGCGCAGCGCAATGGTTCTGATTTACCTTATGTATCACACAAGAACATTGGCAGGTTGGTGGAGCCCAAAGCTATTGTATTTGAATGTGGTGCTAATTGCAGCTGCAACAACAACTGTGTAAATAGAACATCTCAGAAAGGTCTGCAGTATCGCTTGGAGGTATTTAAGACAGCTTCAAAAGGCTGGGGTGTCAGGACTTGGGATACTATCCTCCCTGGGGCTCCCATCTGTGAGTACACTGGTGTGCTGAGGAGGACTGAAGAAGTAGATGGTTTGCTGCAGAACAATTACATATTTGATATTGATTGTCTTCAAACTATGAAGGGTCTGGATGGAAGAGAGAAAAGGGCTGGCTCTGACATGCATCTGCCGTCTCTTCATGCGGAGAATGATTCAGATCCACCTGCACCAGAGTATTGCATTGATGCTGGCTCTATTGGCAACTTTGCAAGGTTTATAAACCACAGCTGCGAGCCTAACCTTTTTGTCCAGNGTGTCTTGAGCTCCCATAATGATGTTAAGCTGGCAAAGGNGACGCTCTTTGCTGCTGACACTATACTTCCTCTTTAGGAGCTTTCATATGATTATGGCTATGTCCTTGGACAGNGNTGNTGGGCCCTGAT                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB096460             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCTGACATGCATCTGCCGTCTCTTCATGCGGAGAATGATTCAGATCCACCTGCACCAGAGTATTGCATTGATGCTGGCTCTATTGGCAACTTTGCAAGGCTTATAAACCACAGCTGCAAGCCTAACCTTTTTGTCCAGTGTGTCTTGAGCTCCCATAATGATGTTAAGCTGGCAAAGGTGACGCTCTTTGCTGCTGACACTATACTTCCTCTTCAGGAGCTTTCATATGATTATGGCTATGT CTTGGACAGTGTTGTTGGG CCTGATGGAAATATTGTCAAGCTGCCTTGCTTCTGTGGTGCACCGTACTGCCGGAAGCGACTTTATTAGATCTGCACCTGTTCGCATCTATTTGGAATATGAACCACTCTAAACTACAATATATAGTAGTATATGTATTCAGTGCCAGGCGTGTAAATGGCATGCTGGAAACACTATGATATTTTGCAGAAGATGAGCATTCTGATTTTTTTGTAGAGGTCATGTTGGAGATGCTATGATATTTAGCAAAAGAATAGCATTCTATTTTTGTGTAGAGAACATGCTATGACATCTTATAAACAAT                       ]


>consensus_6397#0 TCTCCTCCTCCTCCCACACTGCTGCGCGGCCGCCGCCGCCGCCGCCGCCTTCCGCATCGT CGCCGTCGATTTTGCGGAGCTCCAGTGGATGGAGGTGATGGATTCGGTGGCCGTGATGGA GGTCTCGCCGGTGCCGAAGCCGCCACTGGAGGCGGCGCTTGCGCTGCGCCGCAGCGTTCG GTGCTTGAACAGGACGCGCCGTCCCACTTACGTGGAGCAGGAGGAGCCCAAGGAGAGTGC TGGCCGGCGGCGCGGCGGCAAGAGGAAGCGGGAAGAGGAGAAGAAGGAGCCGGTGGCGCA GCACGCCATGAAGCCGGTCAGGATGGGCGATGCAGCCTCGGAGAGGAAGCCCTCCTCGGA GGGGAAGCCGATGCCCGCAATTGCGGCGGAGCCGGTTTCTTGTGCCGGGTTCGCACGACC TGCTGCCGAGGATGATGTCCTTGGCAACGGGAAGAGTGCGAAACTGCGGGTGAAGGAAAC CTTGAGGGCATTCACCAGCCATTACCTTCACCTTGTCCAGGAGGAGCAGAAAAGAGCACA AGCGGTGTTACAGGAAGGCCAGAAGCGTCCATCAAAGCGGCCTGACTTGAAAGCCATTAC AAAGATGCAAGAAAGCAATGCCGTGCTTTATCCAGAGAAGATAATAGGGGAACTACCTGG TGTTGATGTTGGGGATCAATTTTATTCTCGTGCCGAGATGGTTGTTTTGGGCATTCATAG TCATTGGCTGAATGGCATTGATTATATGGGAATGAAATATCAGGGAAAGGAGGAGTATGC AAACCTAACTTTCCCACTGGCAACTTGTATTGTCATGTCGGGAATATATGAAGATGATCT TGATAAGGCAGATGAAATTATTTATACTGGTCAAGGAGGAAATGATTTACTCGGTAATCA TCGCCAAATTGGCTCTCAACAACTGCAACGTGGAAATTTGGCATTGAAGTACAGTAAGGA TAATGGCAATCCCATAAGAGTTATCCGAGGACATATATCAAAGAATAGCTACACTGGGAA GGTCTACACCTATGATGGGCTGTACAAGGTTGTAGATGACTGGGTGCAGAATGGAGTACA AGGGCACGTTGTTTTCAAATATAAATTAAAGCGGCTTGAGGGACAGCCATCACTGACAAC TTCTGAGGTCCGATTTACTCGTGCTGAAGCTCCCACCACGATTTCGGAATTACCTGGGTT GGTTTGTGATGACATATCTGGTGGGCAGGAGAATCTTCCTATTCCTGCTACTAATTTGGT TGATGACCCACCTGTTCCTCCAACTGGTTTTGTGTACTCCAAATCTCTAAAAATTCCAAA GGGCATCAAGATTCCATCTTATTGTAATGGCTGTGACTGTGAAGGAGATTGCGCAAACAA CAAAAACTGCTCATGCGCGCAGCGCAATGGTTCTGATTTACCTTATGTATCACACAAGAA CATTGGCAGGTTGGTGGAGCCCAAAGCTATTGTATTTGAATGTGGTGCTAATTGCAGCTG CAACAACAACTGTGTAAATAGAACATCTCAGAAAGGTCTGCAGTATCGCTTGGAGGTATT TAAGACAGCTTCAAAAGGCTGGGGTGTCAGGACTTGGGATACTATCCTCCCTGGGGCTCC CATCTGTGAGTACACTGGTGTGCTGAGGAGGACTGAAGAAGTAGATGGTTTGCTGCAGAA CAATTACATATTTGATATTGATTGTCTTCAAACTATGAAGGGTCTGGATGGAAGAGAGAA AAGGGCTGGCTCTGACATGCATCTGCCGTCTCTTCATGCGGAGAATGATTCAGATCCACC TGCACCAGAGTATTGCATTGATGCTGGCTCTATTGGCAACTTTGCAAGGTTTATAAACCA CAGCTGCGAGCCTAACCTTTTTGTCCAGTGTGTCTTGAGCTCCCATAATGATGTTAAGCT GGCAAAGGTGACGCTCTTTGCTGCTGACACTATACTTCCTCTTCAGGAGCTTTCATATGA TTATGGCTATGTCTTGGACAGTGTTGTTGGGCCTGATGGAAATATTGTCAAGCTGCCTTG CTTCTGTGGTGCACCGTACTGCCGGAAGCGACTTTATTAGATCTGCACCTGTTTGCATCT ATTTGGAATATGAACCACTCTAGACTATAATATATAGTAGTATATGTATTCAGTGCCAGG CGTGTAAATGGCATGCTGGAAACACTATGATATTTTGCAGAAGATGAGCATTCTGATTTT TTTGTAGAGGTCATGTTGGGGATGCTATGATATTTAGCAAAAGAATAGCATTCTATTTTT GTGTAGAGAACATGCTATGATATCTTATAAACAATTAACCTATATATCTAAGTGCTGA



consensusID : consensus_6397#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 667
fasta sequence
                              [GTGCTGGATTATAATACATTCCGATTGTGGCTTGTTTGACGTATTTTTGCTTGCATCTTTGAGTAAAGGCATTCTATTAAATACGTTTCAATTTGTTTGTATCTTTCAGTTTGCAAAATGTTGTTCCTTAGTATTTATGCCAATGGCATTATTTTTCTTCTGAACTTTGTTTCATTTTGACCCTTTCTCTGTTTTGGTAATACCGCAGAACAGTAAGGATAATGGCAATCCCATAAGAGTTATCCGAGGACATATATCAAAGAATAGCTACACTGGGAAGGTCTACACCTATGATGGGCTGTACAAGGTAGTATCTTTTCTTAATCTCTTCAAATATCATGTTACTTTTTTCGATAATGCAAGCTTTATTAAAACTCAGTTAAATACACCAAGATGATACATTTCAACTGAGCCCACTACCAGCCTCTGCATAGGATGCACACAGCCAGACACAAAGAAAGACCTATCTAGACCCCCTTCACGAAACAAAGATATTAGTGGCTATCAATCCGTAGACTAGATCGTGCCTCGGTAAAAACCTCCCGTGCCACCTGGTCCAAATGTCGCGATACCACCACAATAGTATCCCGAAGACCTGGTTTGTGGATGATAGCCTAGGTACGAAGCCACCGGGTGACTAAAGTAATATCATGTTACTAGCTANAGG]

[+] EMBL CA763108             [GTGCTGGATTATAATACATTCCGATTGTGGCTTGTTTGACGTATTTTTGCTTGCATCTTTGAGTAAAGGCATTCTATTAAATACGTTTCAATTTGTTTGTATCTTTCAGTTTGCAAAATGTTGTTCCTTAGTATTTATGCCAATGGCATTATTTTTCTTCTGAACTTTGTTTCATTTTGACCCTTTCTCTGTTTTGGTAATACCGCAGAACAGTAAGGATAATGGCAATCCCATAAGAGTTATCCGAGGACATATATCAAAGAATAGCTACACTGGGAAGGTCTACACCTATGATGGGCTGTACAAGGTAGTATCTTTTCTTAATCTCTTCAAATATCATGTTACTTTTTTCGATAATGCAAGCTTTATTAAAACTCAGTTAAATACACCAAGATGATACATTTCAACTGAGCCCACTACCAGCCTCTGCATAGGATGCACACAGCCAGACACAAAGAAAGACCTATCTAGACCCCCTTCACGAAACAAAGATATTAGTGGCTATCAATCCGTAGACTAGATCGTGCCTCGGTAAAAACCTCCCGTGCCACCTGGTCCAAATGTCGCGATACCACCACAATAGTATCCCGAAGACCTGGTTTGTGGATGATAGCCTAGGTACGAAGCCACCGGGTGACTAAAGTAATATCATGTTACTAGCTANAGG]


>consensus_6397#1 GTGCTGGATTATAATACATTCCGATTGTGGCTTGTTTGACGTATTTTTGCTTGCATCTTT GAGTAAAGGCATTCTATTAAATACGTTTCAATTTGTTTGTATCTTTCAGTTTGCAAAATG TTGTTCCTTAGTATTTATGCCAATGGCATTATTTTTCTTCTGAACTTTGTTTCATTTTGA CCCTTTCTCTGTTTTGGTAATACCGCAGAACAGTAAGGATAATGGCAATCCCATAAGAGT TATCCGAGGACATATATCAAAGAATAGCTACACTGGGAAGGTCTACACCTATGATGGGCT GTACAAGGTAGTATCTTTTCTTAATCTCTTCAAATATCATGTTACTTTTTTCGATAATGC AAGCTTTATTAAAACTCAGTTAAATACACCAAGATGATACATTTCAACTGAGCCCACTAC CAGCCTCTGCATAGGATGCACACAGCCAGACACAAAGAAAGACCTATCTAGACCCCCTTC ACGAAACAAAGATATTAGTGGCTATCAATCCGTAGACTAGATCGTGCCTCGGTAAAAACC TCCCGTGCCACCTGGTCCAAATGTCGCGATACCACCACAATAGTATCCCGAAGACCTGGT TTGTGGATGATAGCCTAGGTACGAAGCCACCGGGTGACTAAAGTAATATCATGTTACTAG CTANAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6397#0      TCTCCTCCTCCTCCCACACTGCTGCGCGGCCGCCGCCGCCGCCGCCGCCTTCCGCATCGT 60
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      CGCCGTCGATTTTGCGGAGCTCCAGTGGATGGAGGTGATGGATTCGGTGGCCGTGATGGA 120
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      GGTCTCGCCGGTGCCGAAGCCGCCACTGGAGGCGGCGCTTGCGCTGCGCCGCAGCGTTCG 180
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      GTGCTTGAACAGGACGCGCCGTCCCACTTACGTGGAGCAGGAGGAGCCCAAGGAGAGTGC 240
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      TGGCCGGCGGCGCGGCGGCAAGAGGAAGCGGGAAGAGGAGAAGAAGGAGCCGGTGGCGCA 300
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      GCACGCCATGAAGCCGGTCAGGATGGGCGATGCAGCCTCGGAGAGGAAGCCCTCCTCGGA 360
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      GGGGAAGCCGATGCCCGCAATTGCGGCGGAGCCGGTTTCTTGTGCCGGGTTCGCACGACC 420
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      TGCTGCCGAGGATGATGTCCTTGGCAACGGGAAGAGTGCGAAACTGCGGGTGAAGGAAAC 480
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      CTTGAGGGCATTCACCAGCCATTACCTTCACCTTGTCCAGGAGGAGCAGAAAAGAGCACA 540
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      AGCGGTGTTACAGGAAGGCCAGAAGCGTCCATCAAAGCGGCCTGACTTGAAAGCCATTAC 600
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      AAAGATGCAAGAAAGCAATGCCGTGCTTTATCCAGAGAAGATAATAGGGGAACTACCTGG 660
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      TGTTGATGTTGGGGATCAATTTTATTCTCGTGCCGAGATGGTTGTTTTGGGCATTCATAG 720
consensus_6397#1      ----------------------------------GTGCTGGAT-TATAATACATTC-CGA 24
                                                        * * *** * * *    *****    

consensus_6397#0      TCATTGGCTGAATGGCATTGATTATATGGGAATGAAATATCAGGGAAAGGAGGAGTATGC 780
consensus_6397#1      TTGTGGCTTGTTTGACGT-----ATTTTTGCTTGCATCTTTGAGTAAAGGCATTCTAT-T 78
                      *  * *  **  ** * *     ** *  *  ** *   *   * *****     ***  

consensus_6397#0      AAACCTAACTTTCCCACTGGCAACTTGTATTGTCATGTCGGGAATATATGAAGATGATCT 840
consensus_6397#1      AAAT---ACGTTTCAATTTGT---TTGTATCTTTCAGTTTGCAAAATGT-----TGTTCC 127
                      ***    ** ** * * * *    ******  *   **  * ** ** *     ** ** 

consensus_6397#0      TGATAAGGCAGATGAAATTATTTATACTGGTCAAGGAGGAAATGATTTACTCGGTAATCA 900
consensus_6397#1      TTA--------------GTATTTATGCCAAT-------GGCATTATTTTTCTTCTGAACT 166
                      * *               ******* *   *       *  ** ****      * * * 

consensus_6397#0      TCGCCAAATTGGCTCTCAACAACTGCAACGTGGAAATTTGGCATTGAAGTACAGTAAGGA 960
consensus_6397#1      TTGTTTCATTTTGACCCTTTCTCTGT--TTTGGTAAT-----ACCGCAGAACAGTAAGGA 219
                      * *    ***    * *     ***     *** ***     *  * ** **********

consensus_6397#0      TAATGGCAATCCCATAAGAGTTATCCGAGGACATATATCAAAGAATAGCTACACTGGGAA 1020
consensus_6397#1      TAATGGCAATCCCATAAGAGTTATCCGAGGACATATATCAAAGAATAGCTACACTGGGAA 279
                      ************************************************************

consensus_6397#0      GGTCTACACCTATGATGGGCTGTACAAGGTTGTAGATGACTGGGTGCAGAATGGAGTACA 1080
consensus_6397#1      GGTCTACACCTATGATGGGCTGTACAAGGTAGTATCTT------TTCTTAATCTCTTCAA 333
                      ****************************** ***  *       * *  ***    *  *

consensus_6397#0      AGGGCACGTTGTTTTCAAATATAAATTAAAGCGGCTTGAGGGACAGCCATCACTGACAAC 1140
consensus_6397#1      ATATCATGTTACTTTTTTCGATAATGCAA----GCTTTATTAAAAC---TCAGTTAAATA 386
                      *   ** ***  ***     ****   **    **** *   * *    *** * * *  

consensus_6397#0      TTCTGAGGTCCGATTTACTCGTGCTGAAGCTCCCACCACGATTTCGGAATTACCTGGGTT 1200
consensus_6397#1      CACCAAGAT--GATACATTTCAACTGAGCCCACTACCA--GCCTCTGCATA----GGATG 438
                        *  ** *  ***  * *    ****  *  * ****     ** * **     ** * 

consensus_6397#0      GGTTTGTGATGACATATCTGGTGGGCAGGAGAATCTTCCTATTCCTGCTACTAATTTGGT 1260
consensus_6397#1      CACACAGCCAGACACAAAGAAAGACCTATCTAGACCCCCTTCACGAAACAAAGATATTAG 498
                                **** *      *  *     *  *  ***   *     *   ** *   

consensus_6397#0      TGATGACCCACCTGTTCCTCCAACTGGTTTTGTGTACTCCAAATCTCTAAAAATTCCAAA 1320
consensus_6397#1      TGGCTATCAATCCGTAGACTAGATCGTGCCTCGGTAA---AAACCTCCCG---TGCCACC 552
                      **   * * * * **       *  *    *  ***    *** ***      * ***  

consensus_6397#0      GGGCATCAAGATTCCATCTTATTGTAATGGCTGTGACTGTGAAGGAGATTGCGCAAACAA 1380
consensus_6397#1      TGG--TCCAAATGTCGCGATACCACCACAATAGTATCCCGAAGACCTGGTTTGTGGATGA 610
                       **  ** * **  *    **     *     **  *    *       *  *   *  *

consensus_6397#0      CAAAAACTGCTCATGCGCGCAGCGCAATGGTTCTGATTTACCTTATGTATCACACAAGAA 1440
consensus_6397#1      TA------GCCTAGGTACGAAGC-CACCGGGT--GACTAAAGTAATAT----CATGTTAC 657
                       *      **  * *  ** *** **  ** *  ** * *  * ** *    **    * 

consensus_6397#0      CATTGGCAGGTTGGTGGAGCCCAAAGCTATTGTATTTGAATGTGGTGCTAATTGCAGCTG 1500
consensus_6397#1      TAGCTANAGG-------------------------------------------------- 667
                       *     ***                                                  

consensus_6397#0      CAACAACAACTGTGTAAATAGAACATCTCAGAAAGGTCTGCAGTATCGCTTGGAGGTATT 1560
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      TAAGACAGCTTCAAAAGGCTGGGGTGTCAGGACTTGGGATACTATCCTCCCTGGGGCTCC 1620
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      CATCTGTGAGTACACTGGTGTGCTGAGGAGGACTGAAGAAGTAGATGGTTTGCTGCAGAA 1680
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      CAATTACATATTTGATATTGATTGTCTTCAAACTATGAAGGGTCTGGATGGAAGAGAGAA 1740
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      AAGGGCTGGCTCTGACATGCATCTGCCGTCTCTTCATGCGGAGAATGATTCAGATCCACC 1800
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      TGCACCAGAGTATTGCATTGATGCTGGCTCTATTGGCAACTTTGCAAGGTTTATAAACCA 1860
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      CAGCTGCGAGCCTAACCTTTTTGTCCAGTGTGTCTTGAGCTCCCATAATGATGTTAAGCT 1920
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      GGCAAAGGTGACGCTCTTTGCTGCTGACACTATACTTCCTCTTCAGGAGCTTTCATATGA 1980
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      TTATGGCTATGTCTTGGACAGTGTTGTTGGGCCTGATGGAAATATTGTCAAGCTGCCTTG 2040
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      CTTCTGTGGTGCACCGTACTGCCGGAAGCGACTTTATTAGATCTGCACCTGTTTGCATCT 2100
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      ATTTGGAATATGAACCACTCTAGACTATAATATATAGTAGTATATGTATTCAGTGCCAGG 2160
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      CGTGTAAATGGCATGCTGGAAACACTATGATATTTTGCAGAAGATGAGCATTCTGATTTT 2220
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      TTTGTAGAGGTCATGTTGGGGATGCTATGATATTTAGCAAAAGAATAGCATTCTATTTTT 2280
consensus_6397#1      ------------------------------------------------------------
                                                                                  

consensus_6397#0      GTGTAGAGAACATGCTATGATATCTTATAAACAATTAACCTATATATCTAAGTGCTGA 2338
consensus_6397#1      ----------------------------------------------------------
                                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)