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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6413 cluster # 6413       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6413#0 length = 800 sequences # 4  

consensusID : consensus_6413#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 800
fasta sequence
                              [ACCTCTCTTCCATCTCCGAATTCCTTCCCCCCGCCGCTCGCCGGAGCGGGGAACGTGGTGTTTCCGCCGGCGGTTTACCCCAATCGGGAGTCCTCCCCCAATCCGGGTGGACTTAGAGTTTCGAGTCGGAATCTTGCAAGAACAGTCCGTTCCGGACTCCTCCCGCCCATCGGATCGGCCAGAAAAATCCATCGGAGTCTGCTCCTTCCCCCCGTGCGAATCTGACGGGGGCGCAACTCGTCGCGGATTTCTCCCTGTT-CCCCCCCAC-CTCCGGCGAT-GCCGCGGTCGCCGCCGAGCAGAAGAAAGTCGTGGTGCACTT-CCGGTCGACGGGCAACGC-GCCGCAGTTGAAGCAGTCCAAGTTCAAGATTGGTGGAAACGAGAAATTTCTGAAGATCATTGACTTTCTTCGCCGACAAATTCACCAGGATACAGTGTTTCTCTATGTGAACAGTGCATTTTCACCAAATCCAGATGAGTTGATAATCGACCTATACAATAACTTTGGAATCGACGGGCAACTGGTGGTTAACTATGCATCATCGATGGCATGGGGCTGAAAGGCTGTACCTGCTGGAGAGAGGAAACTTCAATCAACATGGAAAAACCTGTGTACAAAATTTACTTGCCGAAACACTCATCATGTAAATTGCTGAGAATTTAACTTCAAAGCGAAGCTCTTTCGAATTATTATTCGGTACACGTTGATGTCAGTAGCAGCAGCTGCAATTTTCACGGGGCTTTCAGCCCCACTGTAAAACTGAGACATCCTTCATTAAACGCCCCAGTGCTTCAGACAAAAA]

[+] EMBL CF327588             [ACCTCTCTTCCATCTCCGAATTCCTTCCCCCCGCCGCTCGCCGGAGCGGGGAACGTGGTGTTTCCGCCGGCGGTTTACCCCAATCGGGAGTCCTCCCCCAATCCGGGTGGACTTAGAGTTTCGAGTCGGAATCTTGCAAGAACAGTCCGTTCCGGACTCCTCCCGCCCATCGGATCGGCCAGAAAAATCCATCGGAGTCTGCTCCTTCCCCCCGTGCGAATCTGACGGGGGCGCAACTCGTCGCGGATTTCTGCCTGTTCCCCCCCCAC C                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF332160             [                                GCCGCTCGCCGGAGCGGGGAACGTGGTGTTTCCGCCGGCGGTTTACCCCAATCGGGAGTCCTCCCCCAATCCGGGTGGACTTCGAGTTTCGAGTCGGAATCTCGCAAGAACAGTCTTTTTTGGACTCCTCCCCCCCATCGGATCGGCCAGAAAAATCCATTGTAGTCAGTTCCTTCCCCCCGTGCGAATCTGACGGGGGCGCAACTCGTCGCGGATTTCTCCCTGTT CCCCCCCAC CTCCGGCGATGGCCGCGGTCGCCGCCGAGCAGAAGAAAGTCGTGGTGCACTT CCGGTCGACGGGCAACGC GCCGCAGTTGAAGCAGTCCAAGTTCAAGATTGGTGGAAACGAGAAATTTCTGAAGATCATTGACTTTCTTCGCCGACAAATTCACCAGGATACAGTGTTTCTCTATGTGAACAGTGCATTTTCACCAAATCCAGATGAGTTGATAATCGACCT                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI806479             [                                                                                                                                                                                                            ttcCCCCCCGTGCG ATCTGACGGGGGCGCAACTCGTCCGGGATTTCTCCCTGTT CCCCCCCCCACTCCGGCGAT GCCGCGGTCGCCGCCGAGCAGAAGAAAGTCGTGGTGCACTT CCGGTCGACGGGCAACGCAGCCGCAGCTGAAGCAGTCCAAGTTCAAGATTGGTGGAAACGAGAAATTTCTGAAGATCATTGACTTTCTTCGCCGACAAATTCACCAGGATACAGTGTTTCTCTATGTGAACAGTGCATTTTCACCAAATCCAGATGAGTTGATAATCGACCTATACAATAACTTTGGAATCGACGGGCAACTGGTGGTTAACTATGCATCATCGATGGCATGGGGCTGAAAGGCTGTACCTGCTGGAGAGAGGAAACTTCAATCAACATGGAAAAACCTGTGTACAAAATTTACTTGCCGAAACACTCATCATGTAAATTGCTGAGAATTTAACTTCAAAGCGAAGCTCTTTCGAATTATTATTCGGTACACGTTGATGTCAGTAGCAGCAGCTGCAATTTTCACGGGGCTTTCAGCCCCACTGTAAAACTGAGACATCCTTCATTAAACGCCCCAGTGCTTCAGACAAAAA]
[-] EMBL CF332159             [                                                                                                                                                                                                                                                                                                      CCGAGCAGAAGAAAGTCGTGGTGCACTTCCCGGT GACGGGCAACGC GCCGCAGTTGAAGCAGTCCAAGTTCAAGATTGGTGGAAACGAGAAATTTCTGAAGATCATTGACTTTCTTCGCCGACAAATTCACCAGGATACAGTGTTTCTCTATGTGAACAGTGCATTTTCACCAAATCCAGATGAGTTGATAATCGACCTATACAATAACTTTGGAATCGACGGGCAACTGGTGGTTAACTATGCATCATCGATGGCATGGGGCTGAAAGGCTGTACCTGCTGGAGAGAGGAAACTTCAATCAACATGGAAAGACCTGTGTACAAAATTTACTTGCCGAAACACTCATCATGTAAATTGCTGAGAATTTAACTTCAAAGCGAAGCTCTTTCGAATTATTATTCGGTACACGTTGATGTCAGTAGCAGCAGCTGCAATTTTCACGGGGCTTTCAGCCCCACTGTAAAACTGAGACATCCTTCATTAAACGCCCCAGTGCTTCAGAAAAAAA]


>consensus_6413#0 ACCTCTCTTCCATCTCCGAATTCCTTCCCCCCGCCGCTCGCCGGAGCGGGGAACGTGGTG TTTCCGCCGGCGGTTTACCCCAATCGGGAGTCCTCCCCCAATCCGGGTGGACTTAGAGTT TCGAGTCGGAATCTTGCAAGAACAGTCCGTTCCGGACTCCTCCCGCCCATCGGATCGGCC AGAAAAATCCATCGGAGTCTGCTCCTTCCCCCCGTGCGAATCTGACGGGGGCGCAACTCG TCGCGGATTTCTCCCTGTTCCCCCCCACCTCCGGCGATGCCGCGGTCGCCGCCGAGCAGA AGAAAGTCGTGGTGCACTTCCGGTCGACGGGCAACGCGCCGCAGTTGAAGCAGTCCAAGT TCAAGATTGGTGGAAACGAGAAATTTCTGAAGATCATTGACTTTCTTCGCCGACAAATTC ACCAGGATACAGTGTTTCTCTATGTGAACAGTGCATTTTCACCAAATCCAGATGAGTTGA TAATCGACCTATACAATAACTTTGGAATCGACGGGCAACTGGTGGTTAACTATGCATCAT CGATGGCATGGGGCTGAAAGGCTGTACCTGCTGGAGAGAGGAAACTTCAATCAACATGGA AAAACCTGTGTACAAAATTTACTTGCCGAAACACTCATCATGTAAATTGCTGAGAATTTA ACTTCAAAGCGAAGCTCTTTCGAATTATTATTCGGTACACGTTGATGTCAGTAGCAGCAG CTGCAATTTTCACGGGGCTTTCAGCCCCACTGTAAAACTGAGACATCCTTCATTAAACGC CCCAGTGCTTCAGACAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)