cluster # 6414

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Oryza sativa
cluster # 6414 cluster # 6414 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6414#0 length = 2440 sequences # 4
consensusID : consensus_6414#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2440
fasta sequence
                              [TTGAATCGAGCGTGCTCAACTGGTTCGGCCCGGCTCGGCGATGGCGGCGGCGGCGGCACAGGGCGAGCGGCCGGACCTGGGCAGCCTGGTGGACGAGCTCTGCGCCACGGGCCGCGCCGCCGAGGCGCACCACCGCGTCTCCCTCCTCTTCCTCTCCTCCTCCTCCGCCGCCGTGCCGTCCCGCCACCTCGACGGGCGCGCCGCCGATGGCCTGCTCCGCCGCCTCCTCCGCGCCCGCAAGCCGCTGCTCACGCTCCGCCTCCTCCAGGCCGCGCCGCCCGCCGCGCTCGTCCCCTCCCTCCCCAACTACAACCGCCTCCTAGCCCTCCTCTGCGGCTCCTCGGCCCCGCTCCTCCTCGTCCTCCTCGCCCACCGCCTCCTCCTCCGCATGCGCGCCGCCCCGGACGCGGCCACCTACGCCGCGCTCCTCGACGGCTACGCCCGCATCCCCGACCCGCGCGCCGTCCGGAAGCTGCTCGACGAAATGCCACGCCGCGGGGTGGCTCCCAGCTCACTCGCGCGCAGTTACCTCGTCAAGGCCTTGCTCCGCAGCCGCGACGTCGACGGGGCTATGGCCCTTGTCGACAACCATCTATGGTCTAGCATGGAGCGCAGCAACGGAGAAGACCAGGAACTGAAGAATGCCGCGTTCGCCAACCTCGTGCAATGCCTCTGCATCGAGGGGTTCTTCCACATTGTCTTCCGAATTGCCGAGGAGATGCCACAGCAACGGTGCGGTGTTGCCGACGTGTTTGCCTACTCTCAGATGATTGACTCCCTTTGCCGGTCTGGGCAGCACCATGGTGCATCCAGGATAGTGTACATCATGGGGAAGAGGGGCATGTATCCAAGCACCGTCTCCTACAATTGCATTGTTCATGGGTTGTGCACCAGCCAGAAGCCTGGGGGGCGCTTGAGGGCGTACCGGCTAGTGATGGAAGGCGTGCGTTTCAGGTATCACCCAAGGGAGGTAACATACAAGGTACTAGTTGATGAGCTCTGCCTGGAGGATGAGCTCGCAAAGGCCAAGGATGTCATGGAACTGATGCTGAAGGTTACTCCTGATGATGACACCAGGACTAGGATATACAATATGTTTCTTGCAGCACTCCGTGTTGTGGACAACCCAAGTGAGCAGCTTGATGTGCTAGTGTCCATGCTGCAGGAAGGATGCAAGCCCGATGTGATCACCATGAACACTGTCATCCATGGTTTCTGCAAAGTTGGAAGGGCCCAGGAAGCCAGGAGGATTGTAGATGACATGCTGAATGGGAAATTCTGTGCTCCAGACGTTGTGACCTTCACCACCCTCATATCCGGATACCTGGGTGTAGGTGAGTTTGCAGAAGCCCTGCATGTACTGTCCACTCTGATGCCCAAGCACCAGTGCTTGCCTAATGTTGTCACTTACAATTGTGTCCTCAAGGGACTGCTCAGCCTTGGGCTACTTGACAGAGCAATGGAGGCCCTTGAGGAAATGAAGTCCAGTAACGTCATTCCTGACTCCGTGACTCACACGGTAATGATCAAAGGGTTCTGCGATGCTGGAGAACTAGAGAAGGCAAAGTCATTTTGGGACAATGTTATCTGGCCATCTGGAATGCATGATGATTATGTGTACAGCGCGATCTTCAGAGGCCTCTGTAAACTAGGGAAACTAGAACAGGCATGTGATTTCTTATATGAATTGGTGGACTCTGGGGTTGCACCTGGTGTCCTGTGCTACAACATTCTCGTCGATGCTGCCTGCAAGCAGGGATTGAAGAAGCTGGTTTATCAGTTAGTGAAGGAGATGAGAAGGAATGGCATATCACCGGATGCTGTTACTTGGAGGATTATTGACAGATTGCGCCTCTACAGCGATGAAAAACAGGATGGGGAGCTCCAGATGTCCGCTACTGATGGGGATCCAAGTTCTGCGGATGACACAGTAGATACCCTCATTTCAAATAGAGATGAGAAGCATACGCCGTCATTGCCATCTAAAACATCCAAATTTGGGACGGTGGTGCGTGACGATAGCAGCAAATGTGAGGAAGAAGAGGTTGACTACTCACCATGCGCTAGTGAGGATCCACCAAATATTATTGAACCTGCCAAAGAAGAAGCATGTCCAATGAATAATTCAGGCGCTGGTACCACAATGGGCAACAGGGGTATGACTAGGGAAGAAGGCCTTATGAAGCCAGATAAGCAGCCTTTGAAAAGAGAGCTGCTGTCTAGAGTGGCCAGAAAGGTGTTTGGACTGTTATAGAAATTGCTAGTGATTTGCTTATTTTTCGCTCGCGAGATTAGTTAGCAAAACAGCATCAAATGAGAACTGAAATGCTTCATAGTAATATTGTATTGGTACTTGTTCTGTAAATTATTTATGACTTCTTAGAGCAAATGTAGCTACTGAAATATATATCAGATTTTGCTGTCAAAAAAAAAAAAAAGA]

[+] EMBL AK110511             [TTGAATCGAGCGTGCTCAACTGGTTCGGCCCGGCTCGGCGATGGCGGCGGCGGCGGCACAGGGCGAGCGGCCGGACCTGGGCAGCCTGGTGGACGAGCTCTGCGCCACGGGCCGCGCCGCCGAGGCGCACCACCGCGTCTCCCTCCTCTTCCTCTCCTCCTCCTCCGCCGCCGTGCCGTCCCGCCACCTCGACGGGCGCGCCGCCGATGGCCTGCTCCGCCGCCTCCTCCGCGCCCGCAAGCCGCTGCTCACGCTCCGCCTCCTCCAGGCCGCGCCGCCCGCCGCGCTCGTCCCCTCCCTCCCCAACTACAACCGCCTCCTAGCCCTCCTCTGCGGCTCCTCGGCCCCGCTCCTCCTCGTCCTCCTCGCCCACCGCCTCCTCCTCCGCATGCGCGCCGCCCCGGACGCGGCCACCTACGCCGCGCTCCTCGACGGCTACGCCCGCATCCCCGACCCGCGCGCCGTCCGGAAGCTGCTCGACGAAATGCCGCGCCGCGGGGTGGCTCCCAGCTCACTCGCGCGCAGTTACCTCGTCAAGGCCTTGCTCCGCAGCCGCGACGTCGACGGGGCTATGGCCCTTGTCGACAACCATCTATGGTCTAGCATGGAGCGCAGCAACGGAGAAGACCAGGAACTGAAGAATGCCGCGTTCGCCAACCTCGTGCAATGCCTCTGCATCGAGGGGTTCTTCCACATTGTCTTCCGAATTGCCGAGGAGATGCCACAGCAACGGTGCGGTGTTGCCGACGTGTTTGCCTACTCTCAGATGATTGACTCCCTTTGCCGGTCTGGGCAGCACCATGGTGCATCCAGGATAGTGTACATCATGGGGAAGAGGGGCATGTATCCAAGCACCGTCTCCTACAATTGCATTGTTCATGGGTTGTGCACCAGCCAGAAGCCTGGGGGGCGCTTGAGGGCGTACCGGCTAGTGATGGAAGGCGTGCGTTTCAGGTATCACCCAAGGGAGGTAACATACAAGGTACTAGTTGATGAGCTCTGCCTGGAGGATGAGCTCGCAAAGGCCAAGGATGTCATGGAACTGATGCTGAAGGTTACTCCTGATGATGACACCAGGACTAGGATATACAATATGTTTCTTGCAGCACTCCGTGTTGTGGACAACCCAAGTGAGCAGCTTGATGTGCTAGTGTCCATGCTGCAGGAAGGATGCAAGCCCGATGTGATCACCATGAACACTGTCATCCATGGTTTCTGCAAAGTTGGAAGGGCCCAGGAAGCCAGGAGGATTGTAGATGACATGCTGAATGGGAAATTCTGTGCTCCAGACGTTGTGACCTTCACCACCCTCATATCCGGATACCTGGGTGTAGGTGAGTTTGCAGAAGCCCTGCATGTACTGTCCACTCTGATGCCCAAGCACCAGTGCTTGCCTAATGTTGTCACTTACAATTGTGTCCTCAAGGGACTGCTCAGCCTTGGGCTACTTGACAGAGCAATGGAGGCCCTTGAGGAAATGAAGTCCAGTAACGTCATTCCTGACTCCGTGACTCACACGGTAATGATCAAAGGGTTCTGCGATGCTGGAGAACTAGAGAAGGCAAAGTCATTTTGGGACAATGTTATCTGGCCATCTGGAATGCATGATGATTATGTGTACAGCGCGATCTTCAGAGGCCTCTGTAAACTAGGGAAACTAGAACAGGCATGTGATTTCTTATATGAATTGGTGGACTCTGGGGTTGCACCTGGTGTCCTGTGCTACAACATTCTCGTCGATGCTGCCTGCAAGCAGGGATTGAAGAAGCTGGTTTATCAGTTAGTGAAGGAGATGAGAAGGAATGGCATATCACCGGATGCTGTTACTTGGAGGATTATTGACAGATTGCGCCTCTACAGCGATGAAAAACAGGATGGGGAGCTCCAGATGTCCGCTACTGATGGGGATCCAAGTTCTGCGGATGACACAGTAGATACCCTCATTTCAAATAGAGATGAGAAGCATACGCCGTCATTGCCATCTAAAACATCCAAATTTGGGACGGTGGTGCGTGACGATAGCAGCAAATGTGAGGAAGAAGAGGTTGACTACTCACCATGCGCTAGTGAGGATCCACCAAATATTATTGAACCTGCCAAAGAAGAAGCATGTCCAATGAATAATTCAGGCGCTGGTACCACAATGGGCAACAGGGGTATGACTAGGGAAGAAGGCCTTATGAAGCCAGATAAGCAGCCTTTGAAAAGAGAGCTGCTGTCTAGAGTGGCCAGAAAGGTGTTTGGACTGTTATAGAAATTGCTAGTGATTTGCTTATTTTTCGCTCGCGAGATTAGTTAGCAAAACAGCATCAAATGAGAACTGAAATGCTTCATAGTAATATTGTATTGGTACTTGTTCTGTAAATTATTTATGACTTCTTAGAGCAAATGTAGCTACTGAAATATATATCAGA                          ]
[+] EMBL CB667388             [                 AACTGGTTCGGCCCGGCTCGGCGATGGCGGCGGCGGCGGCACAGGGCGAGCGGCCGGACCTGGGCAGCCTGGTGGACGAGCTCTGCGCCACGGGCCGCGCCGCCGAGGCGCACCACCGCGTCTCCCTCCTCTTCCTCTCCTCCTCCTCCGCCGCCGTGCCGTCCCGCCACCTCGACGGGCGCGCCGCCGATGGCCTGCTCCGCCGCCTCCTCCGCGCCCGCAAGCCGCTGCTCACGCTCCGCCTCCTCCAGGCCGCGCCGCCCGCCGCGCTCGTCCCCTCCCTCCCCAACTACAACCGCCTCCTAGCCCTCCTCTGCGGCTCCTCGGCCCCGCTCCTCCTCGTCCTCCTCGCCCACCGCCTCCTCCTCCGCATGCGCGCCGCCCCGGACGCGGCCACCTACGCCGCGCTCCTCGACGGCTACGCCCGCATCCCCGACCCGCGCGCCGTCCGGAAGCTGCTCGACGAAATGCCACGCCGCGGGGTGGCTCCCAGCTCACTCGCGCGCAGTTACCTCGTCAAGGCCTTGCTCCGCAGCCGCGACGTCGACGGGGCTATGGCCCTTGTCGACAACCATCTCTGGTCTAGCATGGAGCGCAGCAACGGAGAAGACCAGGAACTGAAGAATGCCGCGTTCGCCAACCTCGTGCAATGCCTCTGCATCGAGGGGTTCTTCCACATTGTCTTCCGAATTGCCGAGGAGATGCCACAGCAACGGTGCGGTGTTGCCGACGTGTTTGCCTACTCTCAGATGATTGACTCCCTTTGCCGGTCTGGGCAGCACCATGGTGCATCCCAGATAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C71716               [                                                                                                                                                                                                                                                                                                                                   CCCTCCTNTNCGGCTCCTCGGCCCCGCTCCTCCTCGTCCTCCTCGCCCACCGCCTCCTCCTCCGCATGCNCGCCGCCCCGGACGCGGCCACCTACGCCGCGCTCCTCGACGGCTACGCCCGCATCCNCGACCCGCGCGCCGTCCGGAAGCTGCTCGACGAAATGCCACGCCGCGGGGTGGCTCCCAGCTCACTCGCGCGCAGTTACCTCGTCAAGGCCTTGCTCCGCAGCCGCNACGTCGACGGGGCTATGGCCCTTTTCGACAACCATCTTTGGTCTAGCATGGAGCGCA NAACGGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB667389             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTGGACTCTGGGGTTGCACCTGGTGTCCTGTGCTACAACATTCTCGTCGATGCTGCCTGCAAGCAGGGATTGAAGAAGCTGGTTTATCAGTTAGTGAAGGAGATGAGAAGGAATGGCATATCACCGGATGCTGTTACTTGGAGGATTATTGACAGATTGCACCTCTACAGCGATGAAAAACAGGATGGGGAGCTCCAGATGTCCGCTACTGATGGGGATCCAAGTTCTGCGGATGACACAGTAGATACCCTCATTTCAAATAGAGATGAGAAGCATACGCCGTCATTGCCATCTAAAACATCCAAATTTGGGACGGTGGTGCGTGACGATAGCAGCAAATGTGAGGAAGAAGAGGTTGACTACTCACCATGTGCTAGTGAGGATCCACCAAATATTATTGAACCTGCCAAAGAAGAAGCATGTCCAATGAATAATTCAGGCGCTGGTACCACAATGGGCAACAGGGGTATGACTAGGGAAGAAGGCCTTATGAAGCCAGATAAGCAGCCTTTGAAAAGAGAGCTGCTGTCTAGAGTGGCCAGAAAGGTGTTTGGACTGTTATAGAAATTGCTAGTGATTTGCTTATTTTTCGCTCGCGAGATTAGTTAGCAAAACAGCATCAAATGAGAACTGAAATGCTTCATAGTAATATTGTATTGGTACTTGTTCTGTAAATTATTTATGACTTCTTAGAGCAAATGTAGCTGGGGAAATATATATCAGATTTTGCTGTCAAAAAAAAAAAAAAGA]




>consensus_6414#0
TTGAATCGAGCGTGCTCAACTGGTTCGGCCCGGCTCGGCGATGGCGGCGGCGGCGGCACA
GGGCGAGCGGCCGGACCTGGGCAGCCTGGTGGACGAGCTCTGCGCCACGGGCCGCGCCGC
CGAGGCGCACCACCGCGTCTCCCTCCTCTTCCTCTCCTCCTCCTCCGCCGCCGTGCCGTC
CCGCCACCTCGACGGGCGCGCCGCCGATGGCCTGCTCCGCCGCCTCCTCCGCGCCCGCAA
GCCGCTGCTCACGCTCCGCCTCCTCCAGGCCGCGCCGCCCGCCGCGCTCGTCCCCTCCCT
CCCCAACTACAACCGCCTCCTAGCCCTCCTCTGCGGCTCCTCGGCCCCGCTCCTCCTCGT
CCTCCTCGCCCACCGCCTCCTCCTCCGCATGCGCGCCGCCCCGGACGCGGCCACCTACGC
CGCGCTCCTCGACGGCTACGCCCGCATCCCCGACCCGCGCGCCGTCCGGAAGCTGCTCGA
CGAAATGCCACGCCGCGGGGTGGCTCCCAGCTCACTCGCGCGCAGTTACCTCGTCAAGGC
CTTGCTCCGCAGCCGCGACGTCGACGGGGCTATGGCCCTTGTCGACAACCATCTATGGTC
TAGCATGGAGCGCAGCAACGGAGAAGACCAGGAACTGAAGAATGCCGCGTTCGCCAACCT
CGTGCAATGCCTCTGCATCGAGGGGTTCTTCCACATTGTCTTCCGAATTGCCGAGGAGAT
GCCACAGCAACGGTGCGGTGTTGCCGACGTGTTTGCCTACTCTCAGATGATTGACTCCCT
TTGCCGGTCTGGGCAGCACCATGGTGCATCCAGGATAGTGTACATCATGGGGAAGAGGGG
CATGTATCCAAGCACCGTCTCCTACAATTGCATTGTTCATGGGTTGTGCACCAGCCAGAA
GCCTGGGGGGCGCTTGAGGGCGTACCGGCTAGTGATGGAAGGCGTGCGTTTCAGGTATCA
CCCAAGGGAGGTAACATACAAGGTACTAGTTGATGAGCTCTGCCTGGAGGATGAGCTCGC
AAAGGCCAAGGATGTCATGGAACTGATGCTGAAGGTTACTCCTGATGATGACACCAGGAC
TAGGATATACAATATGTTTCTTGCAGCACTCCGTGTTGTGGACAACCCAAGTGAGCAGCT
TGATGTGCTAGTGTCCATGCTGCAGGAAGGATGCAAGCCCGATGTGATCACCATGAACAC
TGTCATCCATGGTTTCTGCAAAGTTGGAAGGGCCCAGGAAGCCAGGAGGATTGTAGATGA
CATGCTGAATGGGAAATTCTGTGCTCCAGACGTTGTGACCTTCACCACCCTCATATCCGG
ATACCTGGGTGTAGGTGAGTTTGCAGAAGCCCTGCATGTACTGTCCACTCTGATGCCCAA
GCACCAGTGCTTGCCTAATGTTGTCACTTACAATTGTGTCCTCAAGGGACTGCTCAGCCT
TGGGCTACTTGACAGAGCAATGGAGGCCCTTGAGGAAATGAAGTCCAGTAACGTCATTCC
TGACTCCGTGACTCACACGGTAATGATCAAAGGGTTCTGCGATGCTGGAGAACTAGAGAA
GGCAAAGTCATTTTGGGACAATGTTATCTGGCCATCTGGAATGCATGATGATTATGTGTA
CAGCGCGATCTTCAGAGGCCTCTGTAAACTAGGGAAACTAGAACAGGCATGTGATTTCTT
ATATGAATTGGTGGACTCTGGGGTTGCACCTGGTGTCCTGTGCTACAACATTCTCGTCGA
TGCTGCCTGCAAGCAGGGATTGAAGAAGCTGGTTTATCAGTTAGTGAAGGAGATGAGAAG
GAATGGCATATCACCGGATGCTGTTACTTGGAGGATTATTGACAGATTGCGCCTCTACAG
CGATGAAAAACAGGATGGGGAGCTCCAGATGTCCGCTACTGATGGGGATCCAAGTTCTGC
GGATGACACAGTAGATACCCTCATTTCAAATAGAGATGAGAAGCATACGCCGTCATTGCC
ATCTAAAACATCCAAATTTGGGACGGTGGTGCGTGACGATAGCAGCAAATGTGAGGAAGA
AGAGGTTGACTACTCACCATGCGCTAGTGAGGATCCACCAAATATTATTGAACCTGCCAA
AGAAGAAGCATGTCCAATGAATAATTCAGGCGCTGGTACCACAATGGGCAACAGGGGTAT
GACTAGGGAAGAAGGCCTTATGAAGCCAGATAAGCAGCCTTTGAAAAGAGAGCTGCTGTC
TAGAGTGGCCAGAAAGGTGTTTGGACTGTTATAGAAATTGCTAGTGATTTGCTTATTTTT
CGCTCGCGAGATTAGTTAGCAAAACAGCATCAAATGAGAACTGAAATGCTTCATAGTAAT
ATTGTATTGGTACTTGTTCTGTAAATTATTTATGACTTCTTAGAGCAAATGTAGCTACTG
AAATATATATCAGATTTTGCTGTCAAAAAAAAAAAAAAGA
clustalw multiple alignements is not computed in this case