These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6449#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1232 fasta sequence [TGTCGTGTATCCGTCTTCCCCTCTGCGTCGAAGGAAATCTCCCGTCTCGTCGTCGCTCCTTGCGCCGATCTCCATCCCGCGAGTCGCGAGCAGAGAGCAGGGGAGGGGAGGGGAGGGGCGCAGTCACCCGTCCTGCTGCATCCTGACTATGCTCTTTCTAATAGAGGTAACATAGTTGGATGGATGATGTTTATGGAAGGATAGAGGTCTTCCCCCAGCACTTCTTACCATCACAACAATCCATGGAGACCCCTGCTGATGGTCTCTCCACAAGTAAGACTAACCTGGATTCTCCACCAAGTTCACGTAGACGTTCCTGGACTCCGAAACGAGTAATGGGAGCTGCATCACTTTTGCATTTATTGTCTCTTCCTCGCATAAGATGGTCTTCCAGCACTGA-GGATGATGACAAGATTGAGCTAACCAGAGCTGAAG-TAGAATCATTAAGAACCGAGATTGC-TGATGCTGAAGAGA-GGGAATCTCAGTTAAAAGCT-CGGTTGGAAAATATTGATGAAGTTTTGAGATATGCACGGCTCTCTGGGTATCTCTATATTAGAAGTAGATGGACTCAACTTCCTGGAGAGCCACCTATTCTAGATGATGCTGATGTCGATGATTGGCTTCCTCGGTTTGTTGTTCTGCAAGGGCAATGTGTATACTATTATCTTAAATCTACAGATCTAAGTCCACAAGAATCCACACTGCTGTGTGATATTGTGGAAGTGGGACAGCTTCCGAACTTTGTGCCAGAAGATGAGAAAACAAGATACGCATTCTACATAATGACCCAGTC-AGGTTTGAAGTTTGAATGCTCGAGCATGTCTGAGATACAGGTGGATTCATGGGTGAGAGCGATAAGAGGAGATTGCGGATTGTCTGACGGTGGTGAGAGTAGGAGCAAGACAAGCAGGCAAGAAGTTGGGTCATGGTAATCAATCCTTGTTCTTGAAGGGCGTACACATTAAGATGTATTATGCAGTGATGTACAGTAGATAAGTCGAGAAAATATATAGTGAAAAACTTGGAAACTAGCATAAGATGTAAAAAGATGTCCATTTTTTAATCTTACGATAGTTTTCAGGTTTTAAGTAGATAGGTGGTTTTTTTTTTCCCATAGAGAAGCGAATGCCTGTGCTGATAGCAACTATGTGTGGATACATGTAAATGGGCAAAGTGTAAGACATTGCATATGTATGTGGTGATACATGTAAATGGGCAAGTGTAAGACATTT] [+] EMBL CB673922 [TGTCGTGTATCCGTCTTCCCCTCTGCGTCGAAGGAAATCTCCCGTCTCGTCGTCGCTCCTTGCGCCGATCTCCATCCCGCGAGTCGCGAGCAGAGAGCAGGGGAGGGGAGGGGAGGGGCGCAGTCACCCGTCCTGCTGCATCCTGACTATGCTCTTTCTAATAGAGGTAACATAGTTGGATGGATGATGTTTATGGAAGGATAGAGGTCTTCCCCCAGCACTTCTTACCATCACAACAATCCATGGAGACCCCTGCTGATGGTCTCTCCACAAGTAAGACTAACCTGGATTCTCCACCAAGTTCACGTAGACGTTCCTGGACTCCGAAACGAGTAATGGGAGCTGCATCACTTTTGCATTTATTGTCTCTTCCTCGCATAAGATGGTCTTCCAGCACTGA GGATGATGACAAGATTGAGCTAACCAGAGCTGAAG TAGAATCATTAAGAACCGAGATTGC TGATGCTGAAGAGA GGGAATCTCAGTTAAAAGCT CGGTTGGAAAATATTGATGAAGTTTTGAGATATGCACGGCTCTCTGGGTATCTCTATATTAGAAGTAGATGGACTCAACTTCCTGGAGAGCCACCTATTCTAGATGATGCTGATGTCGATGATTGGCTTCCTCGGTTTGTTGTTCTGCAAGGGCAATGTGTATACTATTATCTTAAATCTACAGATCTAAGTCCACAAGAATCCACACTGCTGTGTGATATTGTGGAAGTGGGACAGCTTCCGAACTTTGTGCCAGAAGATGAGAAAACAAGATACGCATTCTACATAATGACCCAGTC AGGTTTGAA ] [+] EMBL C26569 [ CGCTCCTTGCGCCGATCTCCATCCCGCGAGTCGCGAGCAGAGAGCAGGGGAGGGGAGGGGAGGGGCGCAGTCACCCGTCCTGCTGCATCCTGACTATGCTCTTTCTAATAGAGGTAACATAGTTGGATGGATGATGTTTATGGAAGGATAGAGGTCTTCCCCCAGCACTTCTTACCATCACAACAATCCATGGAGACCCCTGCTGATGGTCTCTCCACAAGTAAGACTAACCTGGATTCTCCACCAAGTTCACGTAGACGTTCCTGGACTCCGAAACGAGTAATGGGAGCTGCATCACTTTTGCATTTATTGTCTCTTCCTCGCATAAGATGGTCTTCCAGCACTGAGGGATGATGACAAGATTGAGCTAACCAGAGCTGAAGTTGGGATCATTAAGNACCGAGATTTCTTGATCCTNAAGGGAGGGGATTTTCAGTTAAAAGCTCCGGTTNGGAAATATTtnt ] [+] EMBL CA763629 [ AGTAATGGGAGCTGCATCACTTTTGCATTTATTGTCTCTTCCTCGCATAAGATGGTCTTCCAGCACTGA GGATGATGACAAGATTGAGCTAACCAGAGCTGAAG TAGAATCATTAAGAACCGAGATTGC TGATGCTGAAGAGA GGGAATCTCAGTTAAAAGCT CGGTTGGAAAATATTGATGAAGTTTTGAGATATGCACGGCTCTCTGGGTATCTCTATATTAGAAGTAGATGGA ] [-] EMBL CB673923 [ TGC TGATGCTGAAGAGA GGGAATCTCAGTTAAAAGCT CGGTTGGAAAATATTGATGAAGTTNTGAGATATGCACGGCTCTCTGGGTATCTCTATATTAGAAGTAGATGGACTCAACTTCCTGGAGAGCCACCTATTCTAGATGATGCTGATGTCGATGATTGGCTTCCTCGGTTTGTTGTTCTGCAAGGGCAATGTGTATACTATTATCTTAAATCTACAGATCTAAGTCCACAAGAATCCACACTGCTGTGTGATATTGTGGAAGTGGGACAGCTTCCGAACTTTGTGCCAGAAGATGAGAAAACAAGATACGCATTCTACATAATGA CCAGTCAAGGTTTGAAGTTTGAATGCTCGAGCATGTCTGAGATACAGGTGGATTCATGGGTGAGAGCGATAAGAGGAGATTGCGGATTGTCTGACGGTGGTGAGAGTAGGAGCAAGACAAGCAGGCAAGAAGTTGGGTCATGGTAATCAATCCTTGTTCTTGAAGGGCGTACACATTAAGATGTATTATGCAGTGATGTACAGTAGATAAGTCGAGAAAATATATAGTGAAAAACTTGGAAACTAGCATAAGATGTAAAAAGATGTCCATTTTTTAATCTTACGATAGTTTTCAGGTTTTAAGTAGATAGGTGGTTTTTTTTTTCCCATAGAGAAGCGAATGCCTGTGCTGATAGCAACTATGTGTGGATACATGTAAATGGGCAAAGTGTAAGACATTGCATATGTATGTGGTGATACATGTAAATGGGCAAGTGTAAGACATTT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||