These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6496#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1908 fasta sequence [TCCCTCCCCTCCCTTCTCCCGCCGCCGCCGCCGCCGCCGCCGCCGAGCATGCCGAGCGCCTTCCACTCCCTCCTCCTCCCCGCCATTCGCAACCCCAAACCTAGCCGTCGCCGCGGCCGCGGCCGCGGCGGCAGCAAACGCCCCAAGAAGACCACCAAATCCAAGAACCGCCTCGCCGACGCCGCCGCCGGAGACGCCACCGCCTTCCACCTGAAGACCTCCGCGCGCGCCGGTCCGGGGGGTGCCGGGAGCGGCCGGCGAGGCGATGGGGGATGCCTCGTGCAGCCGCTCGGCAACCTCCTCCTCCTCGGCGGCGGCGGCAACCTCCGCGACGCGGGGCTCGGCGCGCTCCGCCCGCTCCCCGACGACGTCCTCCTCGACGTGCTCGGCCTGCTCGCGGCGCGCGACCTCGCTAGGCTCTCCGCGGCGTCGAGGGCGCTCTACGTCGTCGCCTCCCACGACCCGCTCTGGCGGGCGCTCGTCCTCGACGAGCTCGGCGGGGACTTCGCCTTCTCGGGCTCGTGGCGCGCCACCTACATCGCCGCCGCGTCGGGCGGCCGCGCCCACCTCCCCCCGCGGGGCCTAGAGATCAGGGGGTTCTACTCCGACTACCTCTTCCAGAGCTGGCTCTGCGCCAACATGGAGATGCGGCCGGAGTGGCTCCACCGGGACACCATCGATCGCCGCCGCGGCATGTCCGTCGAGCAATTCGTCTCCGAATTCGAGGAGCCCAATAGGCCGGTGCTTCTGGAAGGCTGCCTCGAGAGCTGGCCAGCATTGCAGAAGTGGACCAGGGAGCACTTGCTGAAGGTCTCGGCCGGGAAGGAGTTCGCCGTCGGGCCGGTGAGCATGACGCTGGATAGGTACCTCCAGTATGCCGGCAATGTGCAGGAGGAGAGGCCATTGTACCTGTTCGATGCCAAGTTCACCGAGAAGGTGCCGGAGATGGGGAGGGACTATGAGGTGCCGGCGTACTTCCGAGAGGACCTATTCGGGGTGCTTGGGGAGGAAAGGCCGGACCACCGATGGGTTATCATTGGGCCGGCAGGTTCAGGGTCGTCGTTTCATGTTGATCCAAACTCGACATCGGCGTGGAATGCTGTGATCAAGGGAGCCAAGAAGTGGGTGATGTTCCCACCGGAGGTGGTGCCGCCAGGAGTTCATCCAAGTGCGGATGGAGCAGAAGTCACTAGCCCTGTATCTATCATGGAATGGTTCATGAATTTTTATGGGGCATGTAAGACCTGGGAAAAGAGGCCTGTTGAGTGTATATGCCGGGCTGGAGAGGTGGTTTTTGTGCCTAATGGATGGTGGCATTTGGTTATCAATCTGGAGGAATCTATTGCGATTACTCAGAATTATGTGAGCAGGAGGAATCTGTTGAATGTTCTTGACTTTCTCAAGAGGCCCAATGCAAGTGAACTTGTATCAGGGACTACAGACAGGGTAAACCTGCATGACAAGTTCCGCAATGCCATCGATATGACTTATCCTGGGATGATTAAACAGCTTGAACTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCGTTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGTTTCTAGCAGCTAGGTCTGTCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACGATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTATGAGCCTATGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGTAGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACACAATAATAAATTGATCATTGACCTTGTGCAAAAAAAAAAAAAAAAAAAAAAACCGGG] [+] EMBL AK068220 [TCCCTCCCCTCCCTTCTCCCGCCGCCGCCGCCGCCGCCGCCGCCGAGCATGCCGAGCGCCTTCCACTCCCTCCTCCTCCCCGCCATTCGCAACCCCAAACCTAGCCGTCGCCGCGGCCGCGGCCGCGGCGGCAGCAAACGCCCCAAGAAGACCACCAAATCCAAGAACCGCCTCGCCGACGCCGCCGCCGGAGACGCCACCGCCTTCCACCTGAAGACCTCCGCGCGCGCCGGTCCGGGGGGTGCCGGGAGCGGCCGGCGAGGCGATGGGGGATGCCTCGTGCAGCCGCTCGGCAACCTCCTCCTCCTCGGCGGCGGCGGCAACCTCCGCGACGCGGGGCTCGGCGCGCTCCGCCCGCTCCCCGACGACGTCCTCCTCGACGTGCTCGGCCTGCTCGCGGCGCGCGACCTCGCTAGGCTCTCCGCGGCGTCGAGGGCGCTCTACGTCGTCGCCTCCCACGACCCGCTCTGGCGGGCGCTCGTCCTCGACGAGCTCGGCGGGGACTTCGCCTTCTCGGGCTCGTGGCGCGCCACCTACATCGCCGCCGCGTCGGGCGGCCGCGCCCACCTCCCCCCGCGGGGCCTAGAGATCAGGGGGTTCTACTCCGACTACCTCTTCCAGAGCTGGCTCTGCGCCAACATGGAGATGCGGCCGGAGTGGCTCCACCGGGACACCATCGATCGCCGCCGCGGCATGTCCGTCGAGCAATTCGTCTCCGAATTCGAGGAGCCCAATAGGCCGGTGCTTCTGGAAGGCTGCCTCGAGAGCTGGCCAGCATTGCAGAAGTGGACCAGGGAGCACTTGCTGAAGGTCTCGGCCGGGAAGGAGTTCGCCGTCGGGCCGGTGAGCATGACGCTGGATAGGTACCTCCAGTATGCCGGCAATGTGCAGGAGGAGAGGCCATTGTACCTGTTCGATGCCAAGTTCACCGAGAAGGTGCCGGAGATGGGGAGGGACTATGAGGTGCCGGCGTACTTCCGAGAGGACCTATTCGGGGTGCTTGGGGAGGAAAGGCCGGACCACCGATGGGTTATCATTGGGCCGGCAGGTTCAGGGTCGTCGTTTCATGTTGATCCAAACTCGACATCGGCGTGGAATGCTGTGATCAAGGGAGCCAAGAAGTGGGTGATGTTCCCACCGGAGGTGGTGCCGCCAGGAGTTCATCCAAGTGCGGATGGAGCAGAAGTCACTAGCCCTGTATCTATCATGGAATGGTTCATGAATTTTTATGGGGCATGTAAGACCTGGGAAAAGAGGCCTGTTGAGTGTATATGCCGGGCTGGAGAGGTGGTTTTTGTGCCTAATGGATGGTGGCATTTGGTTATCAATCTGGAGGAATCTATTGCGATTACTCAGAATTATGTGAGCAGGAGGAATCTGTTGAATGTTCTTGACTTTCTCAAGAGGCCCAATGCAAGTGAACTTGTATCAGGGACTACAGACAGGGTAAACCTGCATGACAAGTTCCGCAATGCCATCGATATGACTTATCCTGGGATGATTAAACAGCTTGAACTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCGTTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGTTTCTAGCAGCTAGGTCTGCCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACGATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTATGAGCCTATGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGTAGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACACAATAATAAATTGATCATT ] [-] EMBL CA762350 [ GCCCTGTATCTATCATGGAATGGTTCATGAATTTTTATGGGGCATGTAAGACCTGGGAAAAGAGGCCTGTTGAGTGTATATGCCGGGCTGGAGAGGTGGTTTTTGTGCCTAATGGATGGTGGCATTTGGTTATCAATCTGGAGGAATCTATTGCGATTACTCAGAATTATGTGAGCAGGAGGAATCTGTTGAATGTTCTTGACTTTCTCAAGAGGCCCAATGCAAGTGAACTTGTATCAGGGACTACAGACAGGGTAAACCTGCATGACAAGTTCCGCAATGCCATCGATATGACTTATCCTGGGATGATTAAACAGCTTGAACTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCGTTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGTTTCTAGCAGCTGGGTCTGTCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACGATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTATGAGCCTATGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGTAGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACCCAATAATAAATTGATCATTGACCTTGTGCAAAAAAAAAAAAAAAAAAAAAAACCGGG] [+] EMBL CF331352 [ gagtAACAGCTTGAACTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCGTTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGTTTCTAGCAGCTAGGTCTGTCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACGATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTATGAGCCTTTGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGTAGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACACAATAATAAATTGATCATTGACCTTGTGCAAAAA ] [-] EMBL CF331351 [ CTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCGTTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGTTTCTAGCAGCTAGGTCTGTCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACGATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTATGAGCCTTTGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGTAGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACACAATAATAAATTGATCATTGACCTTGTGCAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||