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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6502 cluster # 6502       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6502#0 length = 443 sequences # 4  

consensusID : consensus_6502#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 443
fasta sequence
                              [GGAAATTGCTTGGCTCTGAGTGTTTTGCTTCAAACTACAAAAGTCGACAGTTAACCTGAAAAGATTTTCTTTCTCCCAGCACCAGCACTAGCATCATCACCACAGGGCGAAGGCATGAACAACGTACGTCCTTCCATGGTCTCGTTCCAGGACAGCCTCTTCCTCTGTGACATGTTGTACTGCTAAATGTCCACGGCGCCGCACAGAGGCAGGTCGTTTCGCCTGGTTTCAGGATTGAGCAGGAGCTGCATGCGCTTGTATTGCTTGATCCATGATTGATAGTCCATTACAGTGCATCCTCGTTGGTGTCGTTTCTAGAACAGGACATGCGAATGTGAGTTCGCTATGCTGTGTGGTTGCATGTCTGGAACTGAGGCGGTGAGGCCCCCTTTAATTCCAAGGAAAATCATAGTAATTTTGGTGGATTTCAAAAAAAAAAAAAA]

[+] EMBL AU166676             [GGAAATTGCTTGGCTCTGAGTGTTTTGCTTCAAACTACAAAAGTCGACAGTTAACCTGAAAAGATTTTCTTTCTCCCAGCACCAGCACTAGCATCATCACCACAGGGCGAAGGCATGAACAACGTACGTCCTTCCATGGTCTCGTTCCAGGACAGCCTCTTCCTCTGTGACATGTTGTACTGCTAAATGTCCACGGCGCCGCACAGAGGCAGGTCGTTTCGCCTGGTTTCAGGATTGAGCAGGAGCTGCATGCGCTTGTATTGCTTGATCCATGATTGATAGTCCATTACAGTGCATCCTCGTTGGTGTCGTTTCTAGAACAGGACATGCGAATGTGAGTTCGCTATGCTGTGTGGTTGCATGTCTGGAACTGAGGCGGTGAGGCCCCCTTTAATTCCAAGGAAAATCATAGTAATTTTGGTGGATTTCAAAAAAAAAAAAAA]
[+] EMBL AU068460             [                                                                                                                                                                          CATGTTGTACTGCTAAATGTCCACGGCGCCGCACAGAGGCAGGTCGTTTCGCCTGGTTTCAGGATTGAGCAGGAGCTGCATGCGCTTGTATTGCTTGANCCATGATTGATAGNCCATTACAGTGCANCCTCGTTGGTGNCGTTTCTAGAACAGGACATGCGAATGTGAGTTCGCTATGCTGTGTGGTTGCATGTCTGGAACTGAGGCGGTGAGGCCCCCTTTAATTCCAAGGAAAATCATAGTAATTTTGGTGGATTTCATTTCAAAAAAAA ]
[+] EMBL CF331599             [                                                                                                                                                                                                                                                                                                                                                                                             AGGCCCCCTTTAATTCCAAGGAAAATCATAGTAATTTTTGTGGATTTCAAAAAAAAAAAAA ]
[-] EMBL CF331598             [                                                                                                                                                                                                                                                                                                                                                                                              GGCCCCCTTTAATTCCAAGGAAAATCATAGTAATTTTTGTGGATTTCAAAAAAAAAAAAAA]


>consensus_6502#0 GGAAATTGCTTGGCTCTGAGTGTTTTGCTTCAAACTACAAAAGTCGACAGTTAACCTGAA AAGATTTTCTTTCTCCCAGCACCAGCACTAGCATCATCACCACAGGGCGAAGGCATGAAC AACGTACGTCCTTCCATGGTCTCGTTCCAGGACAGCCTCTTCCTCTGTGACATGTTGTAC TGCTAAATGTCCACGGCGCCGCACAGAGGCAGGTCGTTTCGCCTGGTTTCAGGATTGAGC AGGAGCTGCATGCGCTTGTATTGCTTGATCCATGATTGATAGTCCATTACAGTGCATCCT CGTTGGTGTCGTTTCTAGAACAGGACATGCGAATGTGAGTTCGCTATGCTGTGTGGTTGC ATGTCTGGAACTGAGGCGGTGAGGCCCCCTTTAATTCCAAGGAAAATCATAGTAATTTTG GTGGATTTCAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)