cluster # 6512

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Oryza sativa
cluster # 6512 cluster # 6512 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6512#0 length = 736 sequences # 4

consensusID : consensus_6512#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 736
fasta sequence

                              [CACCTCGAGTCAATCAAACCAACTACCAAAATGACTGGCTTCCTCAACTCCATTGCTAGCCACGCAAAGGCTCACCACGAGAGCGTCAACGCTGCTTGCAACGCCTACTACGGG-GGCTCACTGCCT-GCCTCACGAACCGCCTCGCCTGAGACATCCC-GCAACTCC-TCTGTTGCCGG-TCCATCATCCGCACCAAAGAACCCCACCAACGCCTCCAAGGCCTGGAAGGCACTCAAGAGGCACCACCAGGAGATGAACGCCG-CCTTTGCCGTCTACTACAGCCCC-GGC-AACTCTC--CA-TCGGCATCA-AGGA-AC--TCGTCTGCCGTTTCC--AGCCCCAGGCACA-GTGTCGAGGCACCAA-GCCACTCT-GCTGAGCACGAGCTCAAGGA-GGTGGG-CCCCAGGAACTACCA-GAAGATCTGGA-AGGCCATCAA-GAACAGGGCTGTTGAGCACCACAAGAGTGTCAGCGCCGC-TTACGACCAGACCTACGGCATGCACATTCACCAATAGACGGCTTTGAGAAAGAATGAGAGAGACGTAGAGAGCATCGAAAGGAACCGTGGATGCAATTAATAATTGGGAATGGGGGGAAACGGTCAACAAAAGTGCTTTTTTGGGATAGCGATATACCACTGTGGGATTGGGTACCTTTGGCGTTTATGAAAGTATCGAGAGAAAGGGGATCTCACGTAGATCTGATTAGGGCAGACGAATTTAATGCGGGGGACTC-TTTTACCAAAAAAAAAAA]

[+] EMBL CB967276             [CACCTCGAGTCAATCAAACCAACTACCAAAATGAC GGCTTCCTCAACTCCATTGCTAGCCACGCAAAGGCTCACCACGAGAGCGTCAACGCTGCTTGCAACGCCTACTACGGGNGGCTCACTGCCTNGCCTCACGAACCGCCTCGCCTGAGACATCCC GCAACTCC TCTGTTGCCGG TCCATCATCCGCACCAAAGAACCCCACCAACGCCTCCAAGGCCTGGAAGGCACTCAAGAGGCACCACCAGGAGATGAACGCCG CCTTTGCCGTCTACTACAGCCCCNGGCGAACTCTCNNCA TCGGCATCACAGGACACNNTCGTCTGCCGTTTCCNNAGCCCCAGGCACANGTGTCGAGGCACCAANGCCACTCTNGCTGAGCACGAGCTCAAGGACGGTGGGCCCCCAGGAACTACCANGAAGATCTGGACAGGCCATCAANGAACAGGGCTGTTGAGCACCACAAGAGTGTCAGCGCCGC TTACGACCAGACCTACGGCATGCACATTCACCAATAGACGGCTTTGAGAAAGAATGAGAGAGACGTAGAGAGCATCGAAAGGAACCGTGGATGCAATTAATAATTGGGAATGGGGGGAAACGGTCAACAAAAGTGCTTTATTGGGATAGCGATATACCACTGTGGGATTGGGTACCTTTGGCGTTTATGAAAGTATCGAGAGAAAGGGGATCTCACGTAGATCTGATTAGGGCAGACGAATTTAATGCGGGGGACTC TTTTACCAAAA       ]
[+] EMBL BU673075             [   CTCGAGTCAATCAAACCAACTACCAAAATGACTGGCTTCCTCAACTCCATTGCTAGCCACGCAAAGGCTCACCACGAGAGCGTCAACGCTGCTTGCAACGCCTACTACGGG GGCTCACTGCCT GCCTCACGAACCGCCTCGCCTGAGACATCCC GCAACTCC TCTGTTGCCGG TCCATCATCCGCACCAAAGAACCCCACCAACGCCTCCAAGGCCTGGAAGGCACTCAAGAGGCACCACCAGGAGATGAACGCCG CCTTTGCCGTCTACTACAGCCCC GGC AACTCTC  CA TCGGCATCA AGGA AC  TCGTCTGCCGTTTCC  AGCCCCAGGCACA GTGTCGAGGCACCAA GCCACTCT GCTGAGCACGAGCTCAAGGA GGTGGG CCCCAGGAACTACCA GAAGATCTGGA AGGCCATCAA GAACAGGGCGGTTGAGCACCACAAGAGTGTCAGCGCCGC TTACGACCAGACCTACGGCATGCACATTCACCAATAGACGGCTTTGAGAAAGAATGAGAGAGACGTAGAGAGCATCGAAAGGAACCGTGGATGCAATTAATAATTGGGAATGGGGGGAAACGGTCAACAAAAGTGCTTTTTTGGGATAGCGATATACCACTGTGGGATTGGGTACCTTT                                                                                                 ]
[+] EMBL CB966088             [   CTCGAGT AATCAAACCAACTACCAAAATGACTGGCTTCCTCAACTCCATTGCTAGCCACGCAAAGGCTCACCACGAGAGCGTCAACGCTGCTTGCAACGCCTACTACGGG GGCTCACTGCCT GCCTCACGAACCGCCTCGCCTGAGACATCCC GCAACTCC TCTGTTGCCGGATCCATCATCCGCACCAAAGAACCCCACCAACGCCTCCAAGGCCTGGAAGGCACTCAAGAGGCACCACCAGGAGATGAACGCCGTCCTTTGCCGTCTACTACAGCCCC GGC AACTCTC  CAGTCGGCATCA AGGA AC  TCGTCTGCCGTTTCC  AGCCCCAGGCACA GTGTCGAGGCACCAA GCCACTCT GCTGAGCACGAGCTCAAGGA GGTGGG CCCCAGGAACTACCA GAAGATCTGGA AGGCCATCAA GAACAGGGCTGTTGAGCACCACAAGAGTGTCAGCGCCGCTTTACGACCAGACCTACGGCATGCACATTCACCAATAGACGGCTTTGAGACAGAATGAGACAGACGTACAGAGCATCGca                                                                                                                                                                                                     ]
[+] EMBL CB964842             [    TCGAGT AATC AACCAACTACCAAAATGACTGGCTTCCTCAACTCCATTGCTAGCCACGCAAAGGCTCACCACGAGAGCGTCAACGCTGCTTGCAACGCCTACTACGGG GGCTCACTGCCT GCCTCACGAACCGCCTCGCCTGAGACATCCCGGCAATTCCTTCTGTTGCCGG TCCATCATCCGCACCAAAGAACCCCACCAACGCCTCCAATGCCTGGAAGGCACTCAAGAGGCACCACCAGGAGATGAACGCCG CCTTTGCCGTCTACTACAGCCCC GGC AACTCTC  CA TCGGCATCA AGGA AC  TCGTCTGCCGTTTCC  AGCCCCAGGCACA GTGTCGAGGCACCAA GCCACTCT GCTGAGCACGAGCTCAAGGA GGTGGG CCCCAGGAACTACCA GAAGATCTGGA AGGCCATCAA GAACAGGGCTGTTGAGCACCACAAGAGTGTCAGCGCCGC TTACGACCAGACCTACGGCATGCACATTCACCAATAGACGGCTTTGAGAAAGAATGAGAGAGACGTAGAGAGCATCGAAAGGAACCGTGGATGCAATTAATAATTGGGAATGGGGGGAAACGGTCAACAAAAGTGCTTTTTTGGGATAGCGATATACAACTGTGGGATTGGGTACCTTTGGCGTTTATGAAAGTATTGAGAGAAAGGAGATCTCACGTAGATCTGATTAGTGCAGACGAATTTAATGCGGTGGACTCTTTTTACCAAAAAAAAAAA]




>consensus_6512#0
CACCTCGAGTCAATCAAACCAACTACCAAAATGACTGGCTTCCTCAACTCCATTGCTAGC
CACGCAAAGGCTCACCACGAGAGCGTCAACGCTGCTTGCAACGCCTACTACGGGGGCTCA
CTGCCTGCCTCACGAACCGCCTCGCCTGAGACATCCCGCAACTCCTCTGTTGCCGGTCCA
TCATCCGCACCAAAGAACCCCACCAACGCCTCCAAGGCCTGGAAGGCACTCAAGAGGCAC
CACCAGGAGATGAACGCCGCCTTTGCCGTCTACTACAGCCCCGGCAACTCTCCATCGGCA
TCAAGGAACTCGTCTGCCGTTTCCAGCCCCAGGCACAGTGTCGAGGCACCAAGCCACTCT
GCTGAGCACGAGCTCAAGGAGGTGGGCCCCAGGAACTACCAGAAGATCTGGAAGGCCATC
AAGAACAGGGCTGTTGAGCACCACAAGAGTGTCAGCGCCGCTTACGACCAGACCTACGGC
ATGCACATTCACCAATAGACGGCTTTGAGAAAGAATGAGAGAGACGTAGAGAGCATCGAA
AGGAACCGTGGATGCAATTAATAATTGGGAATGGGGGGAAACGGTCAACAAAAGTGCTTT
TTTGGGATAGCGATATACCACTGTGGGATTGGGTACCTTTGGCGTTTATGAAAGTATCGA
GAGAAAGGGGATCTCACGTAGATCTGATTAGGGCAGACGAATTTAATGCGGGGGACTCTT
TTACCAAAAAAAAAAA

clustalw multiple alignements is not computed in this case