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Oryza sativa
cluster # 6550 cluster # 6550       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6550#0 length = 1902 sequences # 1  
consensus_6550#1 length = 625 sequences # 2  
consensus_6550#2 length = 437 sequences # 1  

consensusID : consensus_6550#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1902
fasta sequence
                              [TGTACGCGCGTGGGGGTGGCTGCGGCGCGAAGGCGGCCGCAGCGCGGCGCTCGGGGCGCGGCGGTGGTGGGCGGAGGCGCGCCGCGGTCGTGCTGCTGCTCGCGCTGGCGTACGTGGCGGGGCTGCTCGTGTTCGTGCTTGCGGGAGGCGGTGGTGTTGGAGTTGGAGGGCGCGTGGAGGTGGGGCGAGAGGTGGGGGTGATGACGGTGGCCTCGCTCCGGAGGCGGCGCGCCGCGGCGGCGGCGGCGCCGCAGCCCGGGTCGGTGTACCGCAGCCACCTCGTGTTCGAGCGGCTCTGGCCGGACATCCGCGACGACGCCAGCTCCGCCTCCGCCGCCGCCTCGTCGCTCTCCTCCACTTCTTGGCGTCGCAGCATGTTGATGACATCGCACTATCAGAATCCTGGGGAGCTATGGATGCCTTGTGTCAACAGGAAGCTGATTCGACCAGAGTTGCCACCTTCAAATGGTTATCTCATGATCGAAGCGAATGGTGGTCTGAATCAACAGCGTCTTTCGATCTGTGATGCAGTTGCTGTGGCCAGTTTGCTTAATGCAACTCTTGTGATCCCAGCATTTCATTTTAATAGTGTTTGGCGTGATCATAGCAAATTTGGTGACATCTTTGACGAAGACCATTTTATTGAGACACTCAAAGAACATGTTAGAGTTGTGAAGGAATTACCTGTAGATGTTTTGACGCGCTTCGATCATAATATCAGCAGCATACCAAATATGAGAACTAAGGCCTATTCATCTCCAAATCACTATATGCAGAAGGTGCTTCCGAAATTGCTGGAGTTAGGGGCTGTGCGAATTGCCCCATTCTCAAATAGACTGGCACAATCAGTTCCATCAAATCTCCAGGCCTTGAGATGTTTTGTTAACTACCAAGCGTTGAGATTTGCTGAGCCAATAAGAGTTCTCGCAGAGGATATGGTTGAAAGGATGGTAAAACGGAGTACTTTGACTGGTGGGAAGTTTGTATCAGTACATCTTCGCTTCGAAGAGGATATGGTAGCTTTTTCATGCTGTACATATGATGGTGGCTTGAAGGAGAAAACTGAAATGGAAAATGCTCGTGAAAGAAGCTGGAGAGGAAAGTTTCATCGGCATGGTCGAGTGATCAATCCTGAGGCAAACAGAAGAGATGGAAAATGTCCTCTTACTCCTCTAGAGGTTGGTATGATGCTGCGGGGCATGGGATTTGACAATACCACCTCCCTCTATGTTGCTTCTGGTAAAATATACAATGCTGAAAAATACATGGCACCGCTTCGACAGATGTTCCCTCTTTTGGCAACAAAGGATACTCTTGCTTTGCCTGAAGAGCTTGCTGAGTTTGAGGGGCACTCATCTCGATTAGCGGCATTAGATTACTCGGTCTGTCTTCCGAGTGAGGTCTTTGTGACAACTCAAGGTGGGAACTTCCCTCACTTTCTGATGGGGCACAGGCGCTACCTGTTTGGCGGGAATGCAAGGACAATAAAGCCAGACAAACGGAAGCTGGTTTTATCTTTCGATGATCCGAATATCAGATGGAATCGGTTCAAGCGCCACATGCAGGATATACTACACCATAGTGACATGAGGGGCACTGCATTGAGGAAACCCAATGATTCCATATACACCTTCCCAATGCCTGAATGTATGTGCCAGCAAGATGGGATGATGTAGGCCTTGTATGATTCATGCACATACGTCGAGGAGGAGGAAATATGCAATTTTGTACACTCTGTAATGATCTGTAGGTAGCCACCACCACCGTACAGAAGCAATCTTTGGCCGGGAATTTGTTGATTTCTGTCTGTAGATTGTAGAGAGAGGAGAGGTGAAAATTGGTTCTGGTTGTAGATATGATGAAACACATGCTGTTGACAAGGGACAGCCTGCCCTGTAAATG]

[+] EMBL AK110878             [TGTACGCGCGTGGGGGTGGCTGCGGCGCGAAGGCGGCCGCAGCGCGGCGCTCGGGGCGCGGCGGTGGTGGGCGGAGGCGCGCCGCGGTCGTGCTGCTGCTCGCGCTGGCGTACGTGGCGGGGCTGCTCGTGTTCGTGCTTGCGGGAGGCGGTGGTGTTGGAGTTGGAGGGCGCGTGGAGGTGGGGCGAGAGGTGGGGGTGATGACGGTGGCCTCGCTCCGGAGGCGGCGCGCCGCGGCGGCGGCGGCGCCGCAGCCCGGGTCGGTGTACCGCAGCCACCTCGTGTTCGAGCGGCTCTGGCCGGACATCCGCGACGACGCCAGCTCCGCCTCCGCCGCCGCCTCGTCGCTCTCCTCCACTTCTTGGCGTCGCAGCATGTTGATGACATCGCACTATCAGAATCCTGGGGAGCTATGGATGCCTTGTGTCAACAGGAAGCTGATTCGACCAGAGTTGCCACCTTCAAATGGTTATCTCATGATCGAAGCGAATGGTGGTCTGAATCAACAGCGTCTTTCGATCTGTGATGCAGTTGCTGTGGCCAGTTTGCTTAATGCAACTCTTGTGATCCCAGCATTTCATTTTAATAGTGTTTGGCGTGATCATAGCAAATTTGGTGACATCTTTGACGAAGACCATTTTATTGAGACACTCAAAGAACATGTTAGAGTTGTGAAGGAATTACCTGTAGATGTTTTGACGCGCTTCGATCATAATATCAGCAGCATACCAAATATGAGAACTAAGGCCTATTCATCTCCAAATCACTATATGCAGAAGGTGCTTCCGAAATTGCTGGAGTTAGGGGCTGTGCGAATTGCCCCATTCTCAAATAGACTGGCACAATCAGTTCCATCAAATCTCCAGGCCTTGAGATGTTTTGTTAACTACCAAGCGTTGAGATTTGCTGAGCCAATAAGAGTTCTCGCAGAGGATATGGTTGAAAGGATGGTAAAACGGAGTACTTTGACTGGTGGGAAGTTTGTATCAGTACATCTTCGCTTCGAAGAGGATATGGTAGCTTTTTCATGCTGTACATATGATGGTGGCTTGAAGGAGAAAACTGAAATGGAAAATGCTCGTGAAAGAAGCTGGAGAGGAAAGTTTCATCGGCATGGTCGAGTGATCAATCCTGAGGCAAACAGAAGAGATGGAAAATGTCCTCTTACTCCTCTAGAGGTTGGTATGATGCTGCGGGGCATGGGATTTGACAATACCACCTCCCTCTATGTTGCTTCTGGTAAAATATACAATGCTGAAAAATACATGGCACCGCTTCGACAGATGTTCCCTCTTTTGGCAACAAAGGATACTCTTGCTTTGCCTGAAGAGCTTGCTGAGTTTGAGGGGCACTCATCTCGATTAGCGGCATTAGATTACTCGGTCTGTCTTCCGAGTGAGGTCTTTGTGACAACTCAAGGTGGGAACTTCCCTCACTTTCTGATGGGGCACAGGCGCTACCTGTTTGGCGGGAATGCAAGGACAATAAAGCCAGACAAACGGAAGCTGGTTTTATCTTTCGATGATCCGAATATCAGATGGAATCGGTTCAAGCGCCACATGCAGGATATACTACACCATAGTGACATGAGGGGCACTGCATTGAGGAAACCCAATGATTCCATATACACCTTCCCAATGCCTGAATGTATGTGCCAGCAAGATGGGATGATGTAGGCCTTGTATGATTCATGCACATACGTCGAGGAGGAGGAAATATGCAATTTTGTACACTCTGTAATGATCTGTAGGTAGCCACCACCACCGTACAGAAGCAATCTTTGGCCGGGAATTTGTTGATTTCTGTCTGTAGATTGTAGAGAGAGGAGAGGTGAAAATTGGTTCTGGTTGTAGATATGATGAAACACATGCTGTTGACAAGGGACAGCCTGCCCTGTAAATG]


>consensus_6550#0 TGTACGCGCGTGGGGGTGGCTGCGGCGCGAAGGCGGCCGCAGCGCGGCGCTCGGGGCGCG GCGGTGGTGGGCGGAGGCGCGCCGCGGTCGTGCTGCTGCTCGCGCTGGCGTACGTGGCGG GGCTGCTCGTGTTCGTGCTTGCGGGAGGCGGTGGTGTTGGAGTTGGAGGGCGCGTGGAGG TGGGGCGAGAGGTGGGGGTGATGACGGTGGCCTCGCTCCGGAGGCGGCGCGCCGCGGCGG CGGCGGCGCCGCAGCCCGGGTCGGTGTACCGCAGCCACCTCGTGTTCGAGCGGCTCTGGC CGGACATCCGCGACGACGCCAGCTCCGCCTCCGCCGCCGCCTCGTCGCTCTCCTCCACTT CTTGGCGTCGCAGCATGTTGATGACATCGCACTATCAGAATCCTGGGGAGCTATGGATGC CTTGTGTCAACAGGAAGCTGATTCGACCAGAGTTGCCACCTTCAAATGGTTATCTCATGA TCGAAGCGAATGGTGGTCTGAATCAACAGCGTCTTTCGATCTGTGATGCAGTTGCTGTGG CCAGTTTGCTTAATGCAACTCTTGTGATCCCAGCATTTCATTTTAATAGTGTTTGGCGTG ATCATAGCAAATTTGGTGACATCTTTGACGAAGACCATTTTATTGAGACACTCAAAGAAC ATGTTAGAGTTGTGAAGGAATTACCTGTAGATGTTTTGACGCGCTTCGATCATAATATCA GCAGCATACCAAATATGAGAACTAAGGCCTATTCATCTCCAAATCACTATATGCAGAAGG TGCTTCCGAAATTGCTGGAGTTAGGGGCTGTGCGAATTGCCCCATTCTCAAATAGACTGG CACAATCAGTTCCATCAAATCTCCAGGCCTTGAGATGTTTTGTTAACTACCAAGCGTTGA GATTTGCTGAGCCAATAAGAGTTCTCGCAGAGGATATGGTTGAAAGGATGGTAAAACGGA GTACTTTGACTGGTGGGAAGTTTGTATCAGTACATCTTCGCTTCGAAGAGGATATGGTAG CTTTTTCATGCTGTACATATGATGGTGGCTTGAAGGAGAAAACTGAAATGGAAAATGCTC GTGAAAGAAGCTGGAGAGGAAAGTTTCATCGGCATGGTCGAGTGATCAATCCTGAGGCAA ACAGAAGAGATGGAAAATGTCCTCTTACTCCTCTAGAGGTTGGTATGATGCTGCGGGGCA TGGGATTTGACAATACCACCTCCCTCTATGTTGCTTCTGGTAAAATATACAATGCTGAAA AATACATGGCACCGCTTCGACAGATGTTCCCTCTTTTGGCAACAAAGGATACTCTTGCTT TGCCTGAAGAGCTTGCTGAGTTTGAGGGGCACTCATCTCGATTAGCGGCATTAGATTACT CGGTCTGTCTTCCGAGTGAGGTCTTTGTGACAACTCAAGGTGGGAACTTCCCTCACTTTC TGATGGGGCACAGGCGCTACCTGTTTGGCGGGAATGCAAGGACAATAAAGCCAGACAAAC GGAAGCTGGTTTTATCTTTCGATGATCCGAATATCAGATGGAATCGGTTCAAGCGCCACA TGCAGGATATACTACACCATAGTGACATGAGGGGCACTGCATTGAGGAAACCCAATGATT CCATATACACCTTCCCAATGCCTGAATGTATGTGCCAGCAAGATGGGATGATGTAGGCCT TGTATGATTCATGCACATACGTCGAGGAGGAGGAAATATGCAATTTTGTACACTCTGTAA TGATCTGTAGGTAGCCACCACCACCGTACAGAAGCAATCTTTGGCCGGGAATTTGTTGAT TTCTGTCTGTAGATTGTAGAGAGAGGAGAGGTGAAAATTGGTTCTGGTTGTAGATATGAT GAAACACATGCTGTTGACAAGGGACAGCCTGCCCTGTAAATG



consensusID : consensus_6550#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 625
fasta sequence
                              [AGACAAGGGGGGCATTAGATTACTCGGTCTGTCTTCCGAGTGAAGTCTTTGTGACAACTCAAGGTGGGAACTTCCCTCACTTTCTGATGGGGCACAGGCGCTACCTGTTTGGCGGGAATGCAAAGACAATAAAGCCAGACAAACGGAAGCTGGTCTTATCTTTCGATGATCCGAATATCAGATGGAATCGGTTCAAGCGCCACATGCAGGATATACTACACCATAGTGACATGAGGGGTACTGCATTGAGGAAACCCAATGATTCCATATACACCTTCCCAATGCCTGAATGTATGTGCCAGCAAGATGGGATGATGTAGGCCTTGTATGATTCACACACATACGACGACGAGGAAACATGCAATTTTGTACACTCTGTAATGATCTGTAGGTAGCCACCACCACCGTACAGAAGCAATCTTTGGCCAGGAATTTGTTGATTTCTGTCTGTAGATTGTAGAGAGAGGAGAGGTGAAAATTGGTTCTGGTTGTAGATATGATGAAACACATGCTGTTGACAAGGGACAGCCTTCCCTGTAAATGTATATGCAGTAAAGAAAGAAACAGAAAAGGCTAACAACTACAGTATTATAAAGAAAGAGAATTTCAAGCCAAAAAAAAAAAA]

[-] EMBL CA762972             [AGACAAGGGGGGCATTAGATTACTCGGTCTGTCTTCCGAGTGAAGTCTTTGTGACAACTCAAGGTGGGAACTTCCCTCACTTTCTGATGGGGCACAGGCGCTACCTGTTTGGCGGGAATGCAAAGACAATAAAGCCAGACAAACGGAAGCTGGTCTTATCTTTCGATGATCCGAATATCAGATGGAATCGGTTCAAGCGCCACATGCAGGATATACTACACCATAGTGACATGAGGGGTACTGCATTGAGGAAACCCAATGATTCCATATACACCTTCCCAATGCCTGAATGTATGTGCCAGCAAGATGGGATGATGTAGGCCTTGTATGATTCACACACATACGACGACGAGGAAACATGCAATTTTGTACACTCTGTAATGATCTGTAGGTAGCCACCACCACCGTACAGAAGCAATCTTTGGCCAGGAATTTGTTGATTTCTGTCTGTAGATTGTAGAGAGAGGAGAGGTGAAAATTGGTTCTGGTTGTAGATATGATGAAACACATGCTGTTGACAAGGGACAGCCTTCCCTGTAAATGTATATGCAGTAAAGAAAGAAACAGAAAAGGCTAACAACTACAGTATTATAAAGAAAGAGAATTTCAAGCCAAAAAAAAAAAA]
[+] EMBL BQ907720             [                                                                                                                                                                                                                                                                                                                                                                                                                                                            gattTGTTGA TGTAG TAGAGGAGAGGTGAAAATTGGTTCTGGTTGTAGATATGATGAAACACATGCTGTTGACAAGGGACAGCCTTCCCTGTAAATGTATATGCAGTAAAGAAAGAAACAGAAAAGGCTAACAACTACAGTATTATAAAGAAAGAGAATTTCAAGACAAAA        ]


>consensus_6550#1 AGACAAGGGGGGCATTAGATTACTCGGTCTGTCTTCCGAGTGAAGTCTTTGTGACAACTC AAGGTGGGAACTTCCCTCACTTTCTGATGGGGCACAGGCGCTACCTGTTTGGCGGGAATG CAAAGACAATAAAGCCAGACAAACGGAAGCTGGTCTTATCTTTCGATGATCCGAATATCA GATGGAATCGGTTCAAGCGCCACATGCAGGATATACTACACCATAGTGACATGAGGGGTA CTGCATTGAGGAAACCCAATGATTCCATATACACCTTCCCAATGCCTGAATGTATGTGCC AGCAAGATGGGATGATGTAGGCCTTGTATGATTCACACACATACGACGACGAGGAAACAT GCAATTTTGTACACTCTGTAATGATCTGTAGGTAGCCACCACCACCGTACAGAAGCAATC TTTGGCCAGGAATTTGTTGATTTCTGTCTGTAGATTGTAGAGAGAGGAGAGGTGAAAATT GGTTCTGGTTGTAGATATGATGAAACACATGCTGTTGACAAGGGACAGCCTTCCCTGTAA ATGTATATGCAGTAAAGAAAGAAACAGAAAAGGCTAACAACTACAGTATTATAAAGAAAG AGAATTTCAAGCCAAAAAAAAAAAA



consensusID : consensus_6550#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 437
fasta sequence
                              [CCCCTTTAGGAGCGCGCATCGCATGTTCCCGCGAAAGCCTCGCGCGCCGAGCTGACGCGATGTCGGTGGCTCTGTCCGCGCGTGGGGGTGGCGTTGGCTGCGGCGCGAAGGCGGCGGCAGCAGCACGGCGCCCGGGGCGCGGCGGCGGTGGTGGGCGGAGGCGCGCCGCGGCCGTGCTGCTGCTGCTGCTCGCGCTGGCGTACGTGGCGGGGCTGCTCGTGTTCGTGCTTGCGGGAGGCGGTGGTGTCGGAGGGCGCGTGGAGGTGGGGCGAGAGGTGGGGGTGATGACTGTGGCCTCGCTCCGGAGGCGGCGCGCCGCGGCAGCGGCGAAGGCGCATCCTGGGTCTGTGTACCGAAACCACCTCGAGTTCGAGCGGCTCTGGACGGACTTCCGCGACCAGGCCATCTCCGCCTCAGACGCCGCCTCGACGCTCTGC]

[+] EMBL CB620101             [CCCCTTTAGGAGCGCGCATCGCATGTTCCCGCGAAAGCCTCGCGCGCCGAGCTGACGCGATGTCGGTGGCTCTGTCCGCGCGTGGGGGTGGCGTTGGCTGCGGCGCGAAGGCGGCGGCAGCAGCACGGCGCCCGGGGCGCGGCGGCGGTGGTGGGCGGAGGCGCGCCGCGGCCGTGCTGCTGCTGCTGCTCGCGCTGGCGTACGTGGCGGGGCTGCTCGTGTTCGTGCTTGCGGGAGGCGGTGGTGTCGGAGGGCGCGTGGAGGTGGGGCGAGAGGTGGGGGTGATGACTGTGGCCTCGCTCCGGAGGCGGCGCGCCGCGGCAGCGGCGAAGGCGCATCCTGGGTCTGTGTACCGAAACCACCTCGAGTTCGAGCGGCTCTGGACGGACTTCCGCGACCAGGCCATCTCCGCCTCAGACGCCGCCTCGACGCTCTGC]


>consensus_6550#2 CCCCTTTAGGAGCGCGCATCGCATGTTCCCGCGAAAGCCTCGCGCGCCGAGCTGACGCGA TGTCGGTGGCTCTGTCCGCGCGTGGGGGTGGCGTTGGCTGCGGCGCGAAGGCGGCGGCAG CAGCACGGCGCCCGGGGCGCGGCGGCGGTGGTGGGCGGAGGCGCGCCGCGGCCGTGCTGC TGCTGCTGCTCGCGCTGGCGTACGTGGCGGGGCTGCTCGTGTTCGTGCTTGCGGGAGGCG GTGGTGTCGGAGGGCGCGTGGAGGTGGGGCGAGAGGTGGGGGTGATGACTGTGGCCTCGC TCCGGAGGCGGCGCGCCGCGGCAGCGGCGAAGGCGCATCCTGGGTCTGTGTACCGAAACC ACCTCGAGTTCGAGCGGCTCTGGACGGACTTCCGCGACCAGGCCATCTCCGCCTCAGACG CCGCCTCGACGCTCTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6550#0      TGTACGCGCGTGGGGGTGGCTGCGGCGCGAAGGCGGCCGCAGCGCGGCGCTCGGGGCGCG 60
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      GCGGTGGTGGGCGGAGGCGCGCCGCGGTCGTGCTGCTGCTCGCGCTGGCGTACGTGGCGG 120
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      GGCTGCTCGTGTTCGTGCTTGCGGGAGGCGGTGGTGTTGGAGTTGGAGGGCGCGTGGAGG 180
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      TGGGGCGAGAGGTGGGGGTGATGACGGTGGCCTCGCTCCGGAGGCGGCGCGCCGCGGCGG 240
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      CGGCGGCGCCGCAGCCCGGGTCGGTGTACCGCAGCCACCTCGTGTTCGAGCGGCTCTGGC 300
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      CGGACATCCGCGACGACGCCAGCTCCGCCTCCGCCGCCGCCTCGTCGCTCTCCTCCACTT 360
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      CTTGGCGTCGCAGCATGTTGATGACATCGCACTATCAGAATCCTGGGGAGCTATGGATGC 420
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      CTTGTGTCAACAGGAAGCTGATTCGACCAGAGTTGCCACCTTCAAATGGTTATCTCATGA 480
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      TCGAAGCGAATGGTGGTCTGAATCAACAGCGTCTTTCGATCTGTGATGCAGTTGCTGTGG 540
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      CCAGTTTGCTTAATGCAACTCTTGTGATCCCAGCATTTCATTTTAATAGTGTTTGGCGTG 600
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      ATCATAGCAAATTTGGTGACATCTTTGACGAAGACCATTTTATTGAGACACTCAAAGAAC 660
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      ATGTTAGAGTTGTGAAGGAATTACCTGTAGATGTTTTGACGCGCTTCGATCATAATATCA 720
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      GCAGCATACCAAATATGAGAACTAAGGCCTATTCATCTCCAAATCACTATATGCAGAAGG 780
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      TGCTTCCGAAATTGCTGGAGTTAGGGGCTGTGCGAATTGCCCCATTCTCAAATAGACTGG 840
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      CACAATCAGTTCCATCAAATCTCCAGGCCTTGAGATGTTTTGTTAACTACCAAGCGTTGA 900
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      GATTTGCTGAGCCAATAAGAGTTCTCGCAGAGGATATGGTTGAAAGGATGGTAAAACGGA 960
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      GTACTTTGACTGGTGGGAAGTTTGTATCAGTACATCTTCGCTTCGAAGAGGATATGGTAG 1020
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      CTTTTTCATGCTGTACATATGATGGTGGCTTGAAGGAGAAAACTGAAATGGAAAATGCTC 1080
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      GTGAAAGAAGCTGGAGAGGAAAGTTTCATCGGCATGGTCGAGTGATCAATCCTGAGGCAA 1140
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      ACAGAAGAGATGGAAAATGTCCTCTTACTCCTCTAGAGGTTGGTATGATGCTGCGGGGCA 1200
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      TGGGATTTGACAATACCACCTCCCTCTATGTTGCTTCTGGTAAAATATACAATGCTGAAA 1260
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      AATACATGGCACCGCTTCGACAGATGTTCCCTCTTTTGGCAACAAAGGATACTCTTGCTT 1320
consensus_6550#1      ------------------------------------------------------------
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      TGCCTGAAGAGCTTGCTGAGTTTGAGGGGCACTCATCTCGATTAGCGGCATTAGATTACT 1380
consensus_6550#1      ------------------------------------AGACAAGGGGGGCATTAGATTACT 24
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      CGGTCTGTCTTCCGAGTGAGGTCTTTGTGACAACTCAAGGTGGGAACTTCCCTCACTTT- 1439
consensus_6550#1      CGGTCTGTCTTCCGAGTGAAGTCTTTGTGACAACTCAAGGTGGGAACTTCCCTCACTTT- 83
consensus_6550#2      ---------CCCCTTTAGGAGCGCGCATCGCATGTTCCCGCGAAAGCCTCGCGCGCCGAG 51
                                 **    *  *      *  **  *    * *  * * ** * * *    

consensus_6550#0      CTGATGGGGCACAGGCG---CTACCTGTTTGGCGGGAATGCAAGGACAATAAAGCCAGAC 1496
consensus_6550#1      CTGATGGGGCACAGGCG---CTACCTGTTTGGCGGGAATGCAAAGACAATAAAGCCAGAC 140
consensus_6550#2      CTGACGCGATGTCGGTGGCTCTGTCCGCGCGTGGGGGTGGCGTTGGCTGCGGCGCGAAGG 111
                      **** * *     ** *   **  * *   *  ***   **   * *      ** *   

consensus_6550#0      AAACGGAAGCTGGTTTTATCTTTCGATGATCCGAATATCAGATGGAATCGGTTCAAGCGC 1556
consensus_6550#1      AAACGGAAGCTGGTCTTATCTTTCGATGATCCGAATATCAGATGGAATCGGTTCAAGCGC 200
consensus_6550#2      CGGCGGCAGCAG--CACGGCGCCCGGGGCGCGG-----CGGCGGTGGTGGGCGGAGGCGC 164
                         *** *** *       *   **  *  * *     * *  *   * **   * ****

consensus_6550#0      CACATGCAGGATATACTACACCATAGTGACATGAGGGGCACTGCATTGAGGAAACCCA-A 1615
consensus_6550#1      CACATGCAGGATATACTACACCATAGTGACATGAGGGGTACTGCATTGAGGAAACCCA-A 259
consensus_6550#2      GCCGCGGCCGTGCTGCTGCTGC-TGCTCGCGCT-GGCGTAC-GTGGCGGGGCTGCTCGTG 221
                        *  *   *   * ** *  * *  *  *    ** * ** *    * **   * *   

consensus_6550#0      TGATTCCATATACACCTTCCCAATGCCTGAATGTATGTGCCAGCAAGATGGGATGATGTA 1675
consensus_6550#1      TGATTCCATATACACCTTCCCAATGCCTGAATGTATGTGCCAGCAAGATGGGATGATGTA 319
consensus_6550#2      TTCGTGCTTGCGGGAGGCGGTGGTGTCGGAGGGCGCGTGGAGGTGGGGCGAGA-GGTGGG 280
                      *   * * *              ** * **  *   ***   *   *  * ** * **  

consensus_6550#0      GGCCTTGTATG-ATTCATGCACATACGTCGAGGAGGAGGAAATATGCAATTTTGTACACT 1734
consensus_6550#1      GGCCTTGTATG-ATTCACACACATACGACGACGAGGA---AACATGCAATTTTGTACACT 375
consensus_6550#2      GGTGATGACTGTGGCCTCGCTCCGGAGGCGGCGCGCC----GCG-GCAGCGGCGAAGGCG 335
                      **   **  **    *   * *    * **  * *          ***     * *  * 

consensus_6550#0      CTGTAATGATCTGTAGGTAGCCACCACCACCGTACAGAAGCAATCTTTGGCCGGGAATTT 1794
consensus_6550#1      CTGTAATGATCTGTAGGTAGCCACCACCACCGTACAGAAGCAATCTTTGGCCAGGAATTT 435
consensus_6550#2      CATCCTGGGTCTGTGTACCGAAACCACC-TCGAGTTCGAGCGGCTCTGGAC--GGACTTC 392
                      *      * *****     *  ******  **      ***     * * *  *** ** 

consensus_6550#0      GTTGATTTCTGTCTGTAGATTGTAGAGAGAGGAGAGGTGAAAATTGGTTCTGGTTGTAGA 1854
consensus_6550#1      GTTGATTTCTGTCTGTAGATTGTAGAGAGAGGAGAGGTGAAAATTGGTTCTGGTTGTAGA 495
consensus_6550#2      CGCGACCAGGCCATCTCCGCCTCAGAC---GCCGCCTCGACGCTCTGC------------ 437
                         **        * *       ***    *  *    **   *  *             

consensus_6550#0      TATGATGAAACACATGCTGTTGACAAGGGACAGCCTGCCCTGTAAATG------------ 1902
consensus_6550#1      TATGATGAAACACATGCTGTTGACAAGGGACAGCCTTCCCTGTAAATGTATATGCAGTAA 555
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      ------------------------------------------------------------
consensus_6550#1      AGAAAGAAACAGAAAAGGCTAACAACTACAGTATTATAAAGAAAGAGAATTTCAAGCCAA 615
consensus_6550#2      ------------------------------------------------------------
                                                                                  

consensus_6550#0      ----------
consensus_6550#1      AAAAAAAAAA 625
consensus_6550#2      ----------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)