These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6552#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2845 fasta sequence [TCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCCGCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGGGGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCGTCACCACCACTGCCGAGCCCGCCGCGGCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCCCCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCCGTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAATCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCACCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCTCCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAAGCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCCACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCCAAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCACCCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTACATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGTAGAAGCACAAAACAGAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAATGCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATTGCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTGACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATCAGTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGTACTGTCTATCAGCATCATCGTTTGAGTTGTGTGGTCACCCTTGGTCCAATGCGCACATGAACGCTAGTCCTGCCACCAGCAAGGGATGTTCATCAGTAGTCATTTGAACAGCTTGTTGTCAGTCTACAAGAATGGACCCTACAAATAAATCATGCATCTGAGTTAGATCTATGTCACTTTGGTCATTGAAAGCTCATCAAATCAAGGGCTCAAGTTTTAAGTGGCACCAGGTGGTGGATGGCCTGGTGAATTACTGTTGCTCCACACTCGGTGGATCATTACTGCGGACCTAATGAGTTCTCAGTACACACTAATGGGCATCTTTTGGTGGGGTTCATTGCTTTCCTTTAAGCCTGCTAATGCTACTGCCTATTTTTCAGCTAGCTCAGACCTGCCCCAACATTGTTGTTGCTGCCTATATTTATGCTGATCAAGACCTGTTTACAGCGACGGTCCCTGGCAAGGCACCAGTTGATCAACTGTCTGAAAACGTGATGGCAGATTGAATTGCTCAGCGTAAGAGTGCAGTAGGTACTGTAGCAGGTCTGGGTTGTGTTTTGGCTTGGTGTTGGCTTGCTCAGACAGGATCTTCAGCTGTATCAGCATGAATAGACGACGACATGATTGTTTTGGGGAGTTTTTCACCGGCTTGCACATATATTAATCTCCCACGCTTGTCCAGTTGGGCAACTATCATTGTCAATTCAAGGTCATATTGGTGTCCATGTCTGCCAAAGTTCTTGGGTACAAGGACTGCCACAGTTCTGTTCCTGGCTGCTACGACAGGCCTTGTTTAGTGGAGAAATTGTGGATCAATTCGTCGCCTGATAGCTGTAAATCCTAAAACTCCTGTAGTGCGGAAAAATAAGAGAAATCCTCAGAAAGTGAC] [+] EMBL AK101044 [TCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCCGCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGGGGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCGTCACCACCACTGCCGAGCCCGCCGCGGCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCCCCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCCGTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAATCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCACCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCTCCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAAGCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCCACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCCAAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCACCCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTACATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGTAGAAGCACAAAACAGAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAATGCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATTGCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTGACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATCAGTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGTACTGTCTATCAGCATCATCGTTTGAGTTGTGTGGTCACCCTTGGTCCAATGCGCACATGAACGCTAGTCCTGCCACCAGCAAGGGATGTTCATCAGTAGTCATTTGAACAGCTTGTTGTCAGTCTACAAGAATGGACCCTACAAATAAATCATGCATCTGAGTTAGATCTATGTCACTTTGGTCATTGAAAGCTCATCAAATCAAGGGCTCAAGTTTTAAGTGGCACCAGGTGGTGGATGGCCTGGTGAATTACTGTTGCTCCACACTCGGTGGATCATTACTGCGGACCTAATGAGTTCTCAGTACACACTAATGGGCATCTTTTGGTGGGGTTCATTGCTTTCCTTTAAGCCTGCTAATGCTACTGCCTATTTTTCAGCTAGCTCAGACCTGCCCCAACATTGTTGTTGCTGCCTATATTTATGCTGATCAAGACCTGTTTACAGCGACGGTCCCTGGCAAGGCACCAGTTGATCAACTGTCTGAAAACGTGATGGCAGATTGAATTGCTCAGCGTAAGAGTGCAGTAGGTACTGTAGCAGGTCTGGGTTGTGTTTTGGCTTGGTGTTGGCTTGCTCAGACAGGATCTTCAGCTGTATCAGCATGAATAGACGACGACATGATTGTTTTGGGGAGTTTTTCACCGGCTTGCACATATATTAATCTCCCACGCTTGTCCAGTTGGGCAACTATCATTGTCAATTCAAGGTCATATTGGTGTCCATGTCTGCCAAAGTTCTTGGGTACAAGGACTGCCACAGTTCTGTTCCTGGCTGCTACGACAGGCCTTGTTTAGTGGAGAAATTGTGGATCAATTCGTCGCCTGATAGCTGTAAATCCTAAAACTCCTGTAGTGCGGAAAAATAAGAGAAATCCTCAGAAAGTGAC] consensusID : consensus_6552#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2191 fasta sequence [CTTCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCCGCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGGGGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCTTCACCACCACTGCCGAGCCCGCCGCGGCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCCCCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCCGTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAATCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCACCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCTCCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAAGCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCCACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCCAAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCACCCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTACATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGCAGAAGCACAAAACAGAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAAT-GCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATTGCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTGACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATCA-GTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGCGAGAGCAAACAACCAGCCAACAA-GGAATGCAG-TTTTGGATGTAGATAGGAC-GGGTCATGCAGGAAAAGTCTCACATGTGAACAGATGCTAGATCCAAGGATTTCTAGCTCGCTTGTTATCTTCAGTA-TTTGTATTCATACTAAATGTGACTGTTGATTAGTACACAGACTTGTTATCCTGTACTGAGGTGACCAGACATGAATTTCAATGGCACATCAGTTAACACCGCTTTT] [+] EMBL AK103148 [CTTCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCCGCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGGGGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCTTCACCACCACTGCCGAGCCCGCCGCGGCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCCCCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCCGTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAATCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCACCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCTCCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAAGCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCCACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCCAAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCACCCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTACATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGCAGAAGCACAAAACAGAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAAT GCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATTGCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTGACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATCA GTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGCGAGAGCAAACAACCAGCCAACAA GGAATGCAG TTTTGGATGTAGATAGGAC GGGTCATGCAGGAAAAGTCTCACATGTGAACAGATGCTAGATCCAAGGATTTCTAGCTCGCTTGTTATCTTCAGTA TTTGTATTCATACTAAATGTGACTGTTGATTAGTACACAGACTTGTTATCCTGTACTGAGGTGACCAGACATGAATTTCAATGGCACATCAGTTAACACCGCTTTT] [+] EMBL OSR30431A [ GAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAG AATNGCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAA ] [+] EMBL CA767233 [ TTTTTGATCCTGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATCANGTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGCCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGCGAGAGCAAACAAGCAGCCAACAAGGGAATGCAGNTTTTGGATGTAGATAGGACGGGGTCATGCAGGAAAAGTCTCACATGTGAACAGATGCTAGATCCAAGGATTTCTAGCTCGCTTGGTATCTTCAGNANTTGGNATTCATACTAAGGGGGACTGGTGATTAGTACACAGACTTGNTATNCTGTn ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_6552#0 --TCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCC 58 consensus_6552#1 CTTCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCC 60 ********************************************************** consensus_6552#0 GCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGG 118 consensus_6552#1 GCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGG 120 ************************************************************ consensus_6552#0 GGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCGTCACCACCACTGCCGAGCCCGCCGCG 178 consensus_6552#1 GGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCTTCACCACCACTGCCGAGCCCGCCGCG 180 ********************************* ************************** consensus_6552#0 GCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCC 238 consensus_6552#1 GCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCC 240 ************************************************************ consensus_6552#0 CCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCC 298 consensus_6552#1 CCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCC 300 ************************************************************ consensus_6552#0 GTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAA 358 consensus_6552#1 GTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAA 360 ************************************************************ consensus_6552#0 TCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCA 418 consensus_6552#1 TCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCA 420 ************************************************************ consensus_6552#0 CCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCT 478 consensus_6552#1 CCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCT 480 ************************************************************ consensus_6552#0 CCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAA 538 consensus_6552#1 CCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAA 540 ************************************************************ consensus_6552#0 GCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCC 598 consensus_6552#1 GCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCC 600 ************************************************************ consensus_6552#0 ACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCC 658 consensus_6552#1 ACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCC 660 ************************************************************ consensus_6552#0 AAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCAC 718 consensus_6552#1 AAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCAC 720 ************************************************************ consensus_6552#0 CCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTA 778 consensus_6552#1 CCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTA 780 ************************************************************ consensus_6552#0 CATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGTAGAAGCACAAAACAGA 838 consensus_6552#1 CATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGCAGAAGCACAAAACAGA 840 ******************************************* **************** consensus_6552#0 GTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAG 898 consensus_6552#1 GTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAG 900 ************************************************************ consensus_6552#0 TCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTT 958 consensus_6552#1 TCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTT 960 ************************************************************ consensus_6552#0 TTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAATGCTTCTTGCTTTCAGA 1018 consensus_6552#1 TTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAATGCTTCTTGCTTTCAGA 1020 ************************************************************ consensus_6552#0 GAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCT 1078 consensus_6552#1 GAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCT 1080 ************************************************************ consensus_6552#0 AAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGC 1138 consensus_6552#1 AAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGC 1140 ************************************************************ consensus_6552#0 AATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCA 1198 consensus_6552#1 AATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCA 1200 ************************************************************ consensus_6552#0 GAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATT 1258 consensus_6552#1 GAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATT 1260 ************************************************************ consensus_6552#0 GCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTG 1318 consensus_6552#1 GCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTG 1320 ************************************************************ consensus_6552#0 ACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAG 1378 consensus_6552#1 ACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAG 1380 ************************************************************ consensus_6552#0 AAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCAC 1438 consensus_6552#1 AAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCAC 1440 ************************************************************ consensus_6552#0 AGATTAGTTGCAAAGGGCATCAGTTGCACATATACGCACATTAATGCCATCTCATACATC 1498 consensus_6552#1 AGATTAGTTGCAAAGGGCATCAGTTGCACATATACGCACATTAATGCCATCTCATACATC 1500 ************************************************************ consensus_6552#0 ATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTT 1558 consensus_6552#1 ATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTT 1560 ************************************************************ consensus_6552#0 TACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTT 1618 consensus_6552#1 TACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTT 1620 ************************************************************ consensus_6552#0 TTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCT 1678 consensus_6552#1 TTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCT 1680 ************************************************************ consensus_6552#0 AATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCAC 1738 consensus_6552#1 AATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCAC 1740 ************************************************************ consensus_6552#0 CTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATG 1798 consensus_6552#1 CTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATG 1800 ************************************************************ consensus_6552#0 CCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTG 1858 consensus_6552#1 CCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTG 1860 ************************************************************ consensus_6552#0 CCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTT 1918 consensus_6552#1 CCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTT 1920 ************************************************************ consensus_6552#0 CCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGTACTGTCTATCAGCATCATCGTT 1978 consensus_6552#1 CCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGCGAGAGCAAACAAC--CAGCCAA 1978 ************************************* * * ** * ** * consensus_6552#0 TGAGTTGTGTGGTCAC---CCTTGGTCCAATGCGCACATGAACGCTAGTCCTGCCACCAG 2035 consensus_6552#1 CAAGGAATGCAGTTTTGGATGTAGATAGGACGGGT-CATGCAGGAAAAGTCTCACATGTG 2037 ** ** ** * * * * * * **** * * * ** ** * consensus_6552#0 CAAGGGATGTTC-ATCAGTAGTCATTTGAACAGCTTGTTGTCAGTC-TACAAGAATGGAC 2093 consensus_6552#1 -AACAGATGCTAGATCCAAGGATTTCTAGCTCGCTTGTTATCTTCAGTATTTGTATTCAT 2096 ** **** * *** * * * ******* ** ** * ** * consensus_6552#0 CCTACAAATAAATCATGCATCTGAGTTAGATCTATGTCACTTTGGTCAT-TGAAAGCTCA 2152 consensus_6552#1 ACTAAATGTGACTGTTGATTAGTACACAGACTTGTTATCCTGTACTGAGGTGACCAGACA 2156 *** * * * * ** * * *** * * ** * * * *** ** consensus_6552#0 TCAAAT-CAAGGGCTCAAGTTTTAAGTGGCACCAGGTGGTGGATGGCCTGGTGAATTACT 2211 consensus_6552#1 TGAATTTCAATGGCACA----TCAGTTAACACCGCTTTT--------------------- 2191 * ** * *** *** ** * * * **** * consensus_6552#0 GTTGCTCCACACTCGGTGGATCATTACTGCGGACCTAATGAGTTCTCAGTACACACTAAT 2271 consensus_6552#1 ------------------------------------------------------------ consensus_6552#0 GGGCATCTTTTGGTGGGGTTCATTGCTTTCCTTTAAGCCTGCTAATGCTACTGCCTATTT 2331 consensus_6552#1 ------------------------------------------------------------ consensus_6552#0 TTCAGCTAGCTCAGACCTGCCCCAACATTGTTGTTGCTGCCTATATTTATGCTGATCAAG 2391 consensus_6552#1 ------------------------------------------------------------ consensus_6552#0 ACCTGTTTACAGCGACGGTCCCTGGCAAGGCACCAGTTGATCAACTGTCTGAAAACGTGA 2451 consensus_6552#1 ------------------------------------------------------------ consensus_6552#0 TGGCAGATTGAATTGCTCAGCGTAAGAGTGCAGTAGGTACTGTAGCAGGTCTGGGTTGTG 2511 consensus_6552#1 ------------------------------------------------------------ consensus_6552#0 TTTTGGCTTGGTGTTGGCTTGCTCAGACAGGATCTTCAGCTGTATCAGCATGAATAGACG 2571 consensus_6552#1 ------------------------------------------------------------ consensus_6552#0 ACGACATGATTGTTTTGGGGAGTTTTTCACCGGCTTGCACATATATTAATCTCCCACGCT 2631 consensus_6552#1 ------------------------------------------------------------ consensus_6552#0 TGTCCAGTTGGGCAACTATCATTGTCAATTCAAGGTCATATTGGTGTCCATGTCTGCCAA 2691 consensus_6552#1 ------------------------------------------------------------ consensus_6552#0 AGTTCTTGGGTACAAGGACTGCCACAGTTCTGTTCCTGGCTGCTACGACAGGCCTTGTTT 2751 consensus_6552#1 ------------------------------------------------------------ consensus_6552#0 AGTGGAGAAATTGTGGATCAATTCGTCGCCTGATAGCTGTAAATCCTAAAACTCCTGTAG 2811 consensus_6552#1 ------------------------------------------------------------ consensus_6552#0 TGCGGAAAAATAAGAGAAATCCTCAGAAAGTGAC 2845 consensus_6552#1 ---------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||