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Oryza sativa
cluster # 6644 cluster # 6644       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6644#0 length = 1551 sequences # 2  
consensus_6644#1 length = 1433 sequences # 1  
consensus_6644#2 length = 510 sequences # 1  

consensusID : consensus_6644#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1551
fasta sequence
                              [TAAACGACGAGAGCTAAAGAAATCTGGCATGGCGCCACCGGCACCGGCCGCTCTCCTCCTCCCCTCCAACCATTCCTATCGCCCGCTCCTGCCTCGCCCAATCCTGCACCACGCCACCGGCTTCGCCTGCGCCTCGGCCTCGCCCTCGCCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCATGCCGCCCCGCTCCGTGCCGCCGCCCTGCCGGCCATCGCCATCGCCCCCGGCGACCACTGGGGCAACTGGGCCTTCCTCCTCTCCGCCGCCGCCTTCGGCACCTGGTCGGAGGAGTCCACGTCGTGGGGCGCCGCGCTCAGCGGCTCGCTCGTCAGCATCATGGCCGGCCTGGCCGCCACGGCCACGGGTCTCGTCACGGCCGGCGCGCCGGCGCAAGACGCCGTCATGGACTACCTGCTGCCGGCCACCGTCCCGCTCCTGCTTCTCGGCGCCGACCTCCGCCGCGTCGTCAGCACCACCGGCGACCTCCTCAAGGCCTTCCTCATCGGATCAGTTGCAACTACAATTGGCACAACGATAGCCTTTCTGTTGGTTCCTATGAAATCACTGGGTCAAGATAGCTGGAAGATCGCCGCTGCGCTCATGGGCAGCTACATTGGTGGAGCGGTGAATTACGTCGCAATCTCTGAAGCACTTGGCGTTTCTCCGTCAGTGCTAGCAGCCGGTGTGGCTGCAGACAACATCATCTCTGCACTCTACTTCATGACCCTCTTCTCGCTGGCAGCCAAGATACCAGCTGAACCTAAAACTGCTCAAGAGGGTAGTAACGGCGGCGAGTCTGAGGGCGGAAGGCGGATGTCGGTGCTCCATGGCGGCGCGGCGGTGGCGCTGTCGTTCGTGATCTGCAAGGCCGGGTCGGCCATCTCCAGCCAGCTGGGAATCCAGGGCGGCACCCTGCCGTGCGTGACGGCGCTGGTGGTGGCGCTGGCGACGGCGTTCCCGCGGCTGCTGGGGAAGCTGGCGCCGTCCGGCGAGACCATCGCGCTGATCCTGATGCAGGTGTTCTTCACGGTGGTGGGCGCCAACGGCAACCTGGTGGACGCGGTGACCAAGGCGCCCAGCGTGTTCGCGTTCGCGCTGGTGCAAGTGACCATCCACCTAGGCATCGTGCTCGCCGCAGGGAAGCTGATGGGGTTCGAGCGGAAGCCGCTGCTGATCGCGTCCAACGCCAACGTGGGCGGGCCGACGACGGCGGCGGCCATGGCGACGGCCAAGGGGTGGAGCTCGCTGATCGTGCCGGGCATCCTGGTGGGCATGTTCGGGATCTCCATTGCCACGTTTGTTGGCATCGGGTTCGGCATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAACCAATCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAATAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACATTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTATTATTATTAGAAGAAGAAGAAGA]

[+] EMBL AK068804             [TAAACGACGAGAGCTAAAGAAATCTGGCATGGCGCCACCGGCACCGGCCGCTCTCCTCCTCCCCTCCAACCATTCCTATCGCCCGCTCCTGCCTCGCCCAATCCTGCACCACGCCACCGGCTTCGCCTGCGCCTCGGCCTCGCCCTCGCCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCATGCCGCCCCGCTCCGTGCCGCCGCCCTGCCGGCCATCGCCATCGCCCCCGGCGACCACTGGGGCAACTGGGCCTTCCTCCTCTCCGCCGCCGCCTTCGGCACCTGGTCGGAGGAGTCCACGTCGTGGGGCGCCGCGCTCAGCGGCTCGCTCGTCAGCATCATGGCCGGCCTGGCCGCCACGGCCACGGGTCTCGTCACGGCCGGCGCGCCGGCGCAAGACGCCGTCATGGACTACCTGCTGCCGGCCACCGTCCCGCTCCTGCTTCTCGGCGCCGACCTCCGCCGCGTCGTCAGCACCACCGGCGACCTCCTCAAGGCCTTCCTCATCGGATCAGTTGCAACTACAATTGGCACAACGATAGCCTTTCTGTTGGTTCCTATGAAATCACTGGGTCAAGATAGCTGGAAGATCGCCGCTGCGCTCATGGGCAGCTACATTGGTGGAGCGGTGAATTACGTCGCAATCTCTGAAGCACTTGGCGTTTCTCCGTCAGTGCTAGCAGCCGGTGTGGCTGCAGACAACATCATCTCTGCACTCTACTTCATGACCCTCTTCTCGCTGGCAGCCAAGATACCAGCTGAACCTAAAACTGCTCAAGAGGGTAGTAACGGCGGCGAGTCTGAGGGCGGAAGGCGGATGTCGGTGCTCCATGGCGGCGCGGCGGTGGCGCTGTCGTTCGTGATCTGCAAGGCCGGGTCGGCCATCTCCAGCCAGCTGGGAATCCAGGGCGGCACCCTGCCGTGCGTGACGGCGCTGGTGGTGGCGCTGGCGACGGCGTTCCCGCGGCTGCTGGGGAAGCTGGCGCCGTCCGGCGAGACCATCGCGCTGATCCTGATGCAGGTGTTCTTCACGGTGGTGGGCGCCAACGGCAACCTGGTGGACGCGGTGACCAAGGCGCCCAGCGTGTTCGCGTTCGCGCTGGTGCAAGTGACCATCCACCTAGGCATCGTGCTCGCCGCAGGGAAGCTGATGGGGTTCGAGCGGAAGCCGCTGCTGATCGCGTCCAACGCCAACGTGGGCGGGCCGACGACGGCGGCGGCCATGGCGACGGCCAAGGGGTGGAGCTCGCTGATCGTGCCGGGCATCCTGGTGGGCATGTTCGGGATCTCCATTGCCACGTTTGTTGGCATCGGGTTCGGCATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAACCAATCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAATAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACATTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTATTATTATTAGAAGAAGAAGAAGA]
[+] EMBL AK098965             [TAGACGACGAGAGCTAAAGAAATCTGGCATGGCGCCACCGGCACCGGCCGCTCTCCTCATCCCCTCCAACCATTCCTATCGCCCGCTCCTGCCTCGCCCAATCCTGCTCCACGCCACCGGCTTCGCCTGCGCCTCGGCCTCGCCCTCGCCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCATGCCGCCCCGCTCCGTGCCGCCGCCCTGCCGGCCATCGCCATCGCCCCCGGCGACCACTGGGGCAACTGGGCCTTCCTCCTCTCCGCCGCCGCCTTCGGCACCTGGTCGGAGGAGTCCACGTCGTGGGGCGCCGCGCTCAGCGGCTCGCTCGTCAGCATCATGGCCGGCCTGGCCGCCACGGCCACGGGTCTCGTCACGGCCGGCGCGCCGGCGCAAGACGCCGTCATGGACTACCTGCTGCCGGCCACCGTCCCGCTCCTGCTTCTCGGCGCCGACCTCCGCCGCGTCGTCAGCACCACCGGCGACCTCCTCAAGGCCTTCCTCATCGGATCAGTTGCAACTACAATTGGCACAACGATAGCCTTTCTGTTGGTTCCTATGAAATCACTGGGTCAAGATAGCTGGAAGATCGCCGCTGCGCTCATGGGCAGCTACATTGGTGGAGCGGTGAATTACGTCGCAATCTCTGAAGCACTTGGCGTTTCTCCGTCAGTGCTAGCAGCCGGTGTGGCTGCAGACAACATCATCTCTGCACTCTACTTCATGACCCTCTTCTCGCTGGCAGCCAAGATACCAGCTGAACCTAAAACTGCTCAAGAGGGTAGTAACGGCGGCGAGTCTGAGGGCGGAAGGCGGATGTCGGTGCTCCATGGCGGCGCGGCGGTGGCGCTGTCGTTCGTGATCTGCAAGGCCGGGTCGGCCATCTCCAGCCAGCTGGGAATCCAGGGCGGCACCCTGCCGTGCGTGACGGCGCTGGTGGTGGCGCTGGCGACGGCGTTCCCGCGGCTGCTGGGGAAGCTGGCGCCGTCCGGCGAGACCATCGCGCTGATCCTGATGCAGGTGTTCTTCACGGTGGTGGGCGCCAACGGCAACCTGGTGGACGCGGTGACCAAGGCGCCCAGCGTGTTCGCGTTCGCGCTGGTGCAAGTGACCATCCACCTAGGCATCGTGCTCGCCGCAGGGAAGCTGATGGGGTTCGAGCGGAAGCCGCTGCTGATCGCGTCCAACGCCAACGTGGGCGGGCCGACGACGGCGGCGGCCATGGCGACGGCCAAGGGGTGGAGCTCGCTGATCGTGCCGGGCATCCTGGTGGGCATGTTCGGGATCTCCATTGCCACGTTTGTTGGCATCGGGTTCGGCATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAACCAATCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAATAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACATTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTATTA                    ]


>consensus_6644#0 TAAACGACGAGAGCTAAAGAAATCTGGCATGGCGCCACCGGCACCGGCCGCTCTCCTCCT CCCCTCCAACCATTCCTATCGCCCGCTCCTGCCTCGCCCAATCCTGCACCACGCCACCGG CTTCGCCTGCGCCTCGGCCTCGCCCTCGCCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCA TGCCGCCCCGCTCCGTGCCGCCGCCCTGCCGGCCATCGCCATCGCCCCCGGCGACCACTG GGGCAACTGGGCCTTCCTCCTCTCCGCCGCCGCCTTCGGCACCTGGTCGGAGGAGTCCAC GTCGTGGGGCGCCGCGCTCAGCGGCTCGCTCGTCAGCATCATGGCCGGCCTGGCCGCCAC GGCCACGGGTCTCGTCACGGCCGGCGCGCCGGCGCAAGACGCCGTCATGGACTACCTGCT GCCGGCCACCGTCCCGCTCCTGCTTCTCGGCGCCGACCTCCGCCGCGTCGTCAGCACCAC CGGCGACCTCCTCAAGGCCTTCCTCATCGGATCAGTTGCAACTACAATTGGCACAACGAT AGCCTTTCTGTTGGTTCCTATGAAATCACTGGGTCAAGATAGCTGGAAGATCGCCGCTGC GCTCATGGGCAGCTACATTGGTGGAGCGGTGAATTACGTCGCAATCTCTGAAGCACTTGG CGTTTCTCCGTCAGTGCTAGCAGCCGGTGTGGCTGCAGACAACATCATCTCTGCACTCTA CTTCATGACCCTCTTCTCGCTGGCAGCCAAGATACCAGCTGAACCTAAAACTGCTCAAGA GGGTAGTAACGGCGGCGAGTCTGAGGGCGGAAGGCGGATGTCGGTGCTCCATGGCGGCGC GGCGGTGGCGCTGTCGTTCGTGATCTGCAAGGCCGGGTCGGCCATCTCCAGCCAGCTGGG AATCCAGGGCGGCACCCTGCCGTGCGTGACGGCGCTGGTGGTGGCGCTGGCGACGGCGTT CCCGCGGCTGCTGGGGAAGCTGGCGCCGTCCGGCGAGACCATCGCGCTGATCCTGATGCA GGTGTTCTTCACGGTGGTGGGCGCCAACGGCAACCTGGTGGACGCGGTGACCAAGGCGCC CAGCGTGTTCGCGTTCGCGCTGGTGCAAGTGACCATCCACCTAGGCATCGTGCTCGCCGC AGGGAAGCTGATGGGGTTCGAGCGGAAGCCGCTGCTGATCGCGTCCAACGCCAACGTGGG CGGGCCGACGACGGCGGCGGCCATGGCGACGGCCAAGGGGTGGAGCTCGCTGATCGTGCC GGGCATCCTGGTGGGCATGTTCGGGATCTCCATTGCCACGTTTGTTGGCATCGGGTTCGG CATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAACCAATCTATAGTACTAACAATTCAAT TGGTTTATATATAGCTGTGATCAATAAATAATAATGGAGGAGTAGTAGCAATGAAGAATC ATGCATGCATTTCAATGAAAAGTGTAAACATTAGAAGAAGAAGAAGAAGAAGAAGAAAAT ACTGTATTATTTATCAAGAGTAATACTATTATTATTAGAAGAAGAAGAAGA



consensusID : consensus_6644#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1433
fasta sequence
                              [CGCAGACAAAACAACGAGACCGTACAGGTAGAGGTGGTAAAGGTAAACGACGAGAGCTAAAGAAATCTGGCATGGCGCCACCGGCACCGGCCGCTCTCCTCCTCCCCTCCAACCATTCCTATCGCCCGCTCCTGCCTCGCCCAATCCTGCACCACGCCACCGGCTTCGCCTGCGCCTCGGCCTCGCCCTCGCCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCATGCCGCCCCGCTCCGTGCCGCCGCCCTGCCGGCCATCGCCATCGCCCCCGGCGACCACTGGGGCAACTGGGCCTTCCTCCTCTCCGCCGCCGCCTTCGGCACCTGGTCGGAGGAGTCCACGTCGTGGGGCGCCGCGCTCAGCGGCTCGCTCGTCAGCACCACCGGCGACCTCCTCAAGGCCTTCCTCATCGGATCAGTTGCAACTACAATTGGCACAACGATAGCCTTTCTGTTGGTTCCTATGAAATCACTGGGTCAAGATAGCTGGAAGATCGCCGCTGCGCTCATGGGCAGCTACATTGGTGGAGCGGTGAATTACGTCGCAATCTCTGAAGCACTTGGCGTTTCTCCGTCAGTGCTAGCAGCCGGTGTGGCTGCAGACAACATCATCTCTGCACTCTACTTCATGACCCTCTTCTCGCTGGCAGCCAAGATACCAGCTGAACCTAAAACTGCTCAAGAGGGTAGTAACGGCGGCGAGTCTGAGGGCGGAAGGCGGATGTCGGTGCTCCATGGCGGCGCGGCGGTGGCGCTGTCGTTCGTGATCTGCAAGGCCGGGTCGGCCATCTCCAGCCAGCTGGGAATCCAGGGCGGCACCCTGCCGTGCGTGACGGCGCTGGTGGTGGCGCTGGCGACGGCGTTCCCGCGGCTGCTGGGGAAGCTGGCGCCGTCCGGCGAGACCATCGCGCTGATCCTGATGCAGGTGTTCTTCACGGTGGTGGGCGCCAACGGCAACCTGGTGGACGCGGTGACCAAGGCGCCCAGCGTGTTCGCGTTCGCGCTGGTGCAAGTGACCATCCACCTAGGCATCGTGCTCGCCGCAGGGAAGCTGATGGGGTTCGAGCGGAAGCCGCTGCTGATCGCGTCCAACGCCAACGTGGGCGGGCCGACGACGGCGGCGGCCATGGCGACGGCCAAGGGGTGGAGCTCGCTGATCGTGCCGGGCATCCTGGTGGGCATGTTCGGGATCTCCATTGCCACGTTTGTTGGCATCGGGTTCGGCATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAACCAATCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAATAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACATTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTA]

[+] EMBL AK066804             [CGCAGACAAAACAACGAGACCGTACAGGTAGAGGTGGTAAAGGTAAACGACGAGAGCTAAAGAAATCTGGCATGGCGCCACCGGCACCGGCCGCTCTCCTCCTCCCCTCCAACCATTCCTATCGCCCGCTCCTGCCTCGCCCAATCCTGCACCACGCCACCGGCTTCGCCTGCGCCTCGGCCTCGCCCTCGCCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCATGCCGCCCCGCTCCGTGCCGCCGCCCTGCCGGCCATCGCCATCGCCCCCGGCGACCACTGGGGCAACTGGGCCTTCCTCCTCTCCGCCGCCGCCTTCGGCACCTGGTCGGAGGAGTCCACGTCGTGGGGCGCCGCGCTCAGCGGCTCGCTCGTCAGCACCACCGGCGACCTCCTCAAGGCCTTCCTCATCGGATCAGTTGCAACTACAATTGGCACAACGATAGCCTTTCTGTTGGTTCCTATGAAATCACTGGGTCAAGATAGCTGGAAGATCGCCGCTGCGCTCATGGGCAGCTACATTGGTGGAGCGGTGAATTACGTCGCAATCTCTGAAGCACTTGGCGTTTCTCCGTCAGTGCTAGCAGCCGGTGTGGCTGCAGACAACATCATCTCTGCACTCTACTTCATGACCCTCTTCTCGCTGGCAGCCAAGATACCAGCTGAACCTAAAACTGCTCAAGAGGGTAGTAACGGCGGCGAGTCTGAGGGCGGAAGGCGGATGTCGGTGCTCCATGGCGGCGCGGCGGTGGCGCTGTCGTTCGTGATCTGCAAGGCCGGGTCGGCCATCTCCAGCCAGCTGGGAATCCAGGGCGGCACCCTGCCGTGCGTGACGGCGCTGGTGGTGGCGCTGGCGACGGCGTTCCCGCGGCTGCTGGGGAAGCTGGCGCCGTCCGGCGAGACCATCGCGCTGATCCTGATGCAGGTGTTCTTCACGGTGGTGGGCGCCAACGGCAACCTGGTGGACGCGGTGACCAAGGCGCCCAGCGTGTTCGCGTTCGCGCTGGTGCAAGTGACCATCCACCTAGGCATCGTGCTCGCCGCAGGGAAGCTGATGGGGTTCGAGCGGAAGCCGCTGCTGATCGCGTCCAACGCCAACGTGGGCGGGCCGACGACGGCGGCGGCCATGGCGACGGCCAAGGGGTGGAGCTCGCTGATCGTGCCGGGCATCCTGGTGGGCATGTTCGGGATCTCCATTGCCACGTTTGTTGGCATCGGGTTCGGCATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAACCAATCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAATAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACATTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTA]


>consensus_6644#1 CGCAGACAAAACAACGAGACCGTACAGGTAGAGGTGGTAAAGGTAAACGACGAGAGCTAA AGAAATCTGGCATGGCGCCACCGGCACCGGCCGCTCTCCTCCTCCCCTCCAACCATTCCT ATCGCCCGCTCCTGCCTCGCCCAATCCTGCACCACGCCACCGGCTTCGCCTGCGCCTCGG CCTCGCCCTCGCCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCATGCCGCCCCGCTCCGTG CCGCCGCCCTGCCGGCCATCGCCATCGCCCCCGGCGACCACTGGGGCAACTGGGCCTTCC TCCTCTCCGCCGCCGCCTTCGGCACCTGGTCGGAGGAGTCCACGTCGTGGGGCGCCGCGC TCAGCGGCTCGCTCGTCAGCACCACCGGCGACCTCCTCAAGGCCTTCCTCATCGGATCAG TTGCAACTACAATTGGCACAACGATAGCCTTTCTGTTGGTTCCTATGAAATCACTGGGTC AAGATAGCTGGAAGATCGCCGCTGCGCTCATGGGCAGCTACATTGGTGGAGCGGTGAATT ACGTCGCAATCTCTGAAGCACTTGGCGTTTCTCCGTCAGTGCTAGCAGCCGGTGTGGCTG CAGACAACATCATCTCTGCACTCTACTTCATGACCCTCTTCTCGCTGGCAGCCAAGATAC CAGCTGAACCTAAAACTGCTCAAGAGGGTAGTAACGGCGGCGAGTCTGAGGGCGGAAGGC GGATGTCGGTGCTCCATGGCGGCGCGGCGGTGGCGCTGTCGTTCGTGATCTGCAAGGCCG GGTCGGCCATCTCCAGCCAGCTGGGAATCCAGGGCGGCACCCTGCCGTGCGTGACGGCGC TGGTGGTGGCGCTGGCGACGGCGTTCCCGCGGCTGCTGGGGAAGCTGGCGCCGTCCGGCG AGACCATCGCGCTGATCCTGATGCAGGTGTTCTTCACGGTGGTGGGCGCCAACGGCAACC TGGTGGACGCGGTGACCAAGGCGCCCAGCGTGTTCGCGTTCGCGCTGGTGCAAGTGACCA TCCACCTAGGCATCGTGCTCGCCGCAGGGAAGCTGATGGGGTTCGAGCGGAAGCCGCTGC TGATCGCGTCCAACGCCAACGTGGGCGGGCCGACGACGGCGGCGGCCATGGCGACGGCCA AGGGGTGGAGCTCGCTGATCGTGCCGGGCATCCTGGTGGGCATGTTCGGGATCTCCATTG CCACGTTTGTTGGCATCGGGTTCGGCATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAAC CAATCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAATAAT GGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACATTAGA AGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTA



consensusID : consensus_6644#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 510
fasta sequence
                              [GTGACCAGTCCACCTAGGCATCGTGCTCTGCCGCATGGGAAGCTGATGGGGTTCAGACGCAGGAAGCCAGCTTGCTTGATCGCAGTCCAAACAGCCAAACAGTGGNCAGGCCACAGACAGACCAGGTCAGCAGACCATTGNCAGACAGGACACAAAGGGGGTGGATGCTTCAGCTTGATTCAGTCCAGGGCAATTCCTTGGTGGCGCAATTGTTTCAGGGATCTTCCATTGCCAACGTTTGTTGGCATCGGGTTCGCCATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAACCAAATCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAATAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACAATTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTATTATTATTAGAANNAGAAGAAGAAAAGTTTTCCAAAAAAAAAA]

[+] EMBL BM421702             [GTGACCAGTCCACCTAGGCATCGTGCTCTGCCGCATGGGAAGCTGATGGGGTTCAGACGCAGGAAGCCAGCTTGCTTGATCGCAGTCCAAACAGCCAAACAGTGGNCAGGCCACAGACAGACCAGGTCAGCAGACCATTGNCAGACAGGACACAAAGGGGGTGGATGCTTCAGCTTGATTCAGTCCAGGGCAATTCCTTGGTGGCGCAATTGTTTCAGGGATCTTCCATTGCCAACGTTTGTTGGCATCGGGTTCGCCATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAACCAAATCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAATAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACAATTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTATTATTATTAGAANNAGAAGAAGAAAAGTTTTCCAAAAAAAAAA]


>consensus_6644#2 GTGACCAGTCCACCTAGGCATCGTGCTCTGCCGCATGGGAAGCTGATGGGGTTCAGACGC AGGAAGCCAGCTTGCTTGATCGCAGTCCAAACAGCCAAACAGTGGNCAGGCCACAGACAG ACCAGGTCAGCAGACCATTGNCAGACAGGACACAAAGGGGGTGGATGCTTCAGCTTGATT CAGTCCAGGGCAATTCCTTGGTGGCGCAATTGTTTCAGGGATCTTCCATTGCCAACGTTT GTTGGCATCGGGTTCGCCATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAACCAAATCTA TAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAATAATGGAGGAG TAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACAATTAGAAGAAGA AGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTATTATTATTAGAAN NAGAAGAAGAAAAGTTTTCCAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6644#0      -------------------------------------------TAAACGACGAGAGCTAA 17
consensus_6644#1      CGCAGACAAAACAACGAGACCGTACAGGTAGAGGTGGTAAAGGTAAACGACGAGAGCTAA 60
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      AGAAATCTGGCATGGCGCCACCGGCACCGGCCGCTCTCCTCCTCCCCTCCAACCATTCCT 77
consensus_6644#1      AGAAATCTGGCATGGCGCCACCGGCACCGGCCGCTCTCCTCCTCCCCTCCAACCATTCCT 120
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      ATCGCCCGCTCCTGCCTCGCCCAATCCTGCACCACGCCACCGGCTTCGCCTGCGCCTCGG 137
consensus_6644#1      ATCGCCCGCTCCTGCCTCGCCCAATCCTGCACCACGCCACCGGCTTCGCCTGCGCCTCGG 180
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      CCTCGCCCTCGCCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCATGCCGCCCCGCTCCGTG 197
consensus_6644#1      CCTCGCCCTCGCCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCATGCCGCCCCGCTCCGTG 240
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      CCGCCGCCCTGCCGGCCATCGCCATCGCCCCCGGCGACCACTGGGGCAACTGGGCCTTCC 257
consensus_6644#1      CCGCCGCCCTGCCGGCCATCGCCATCGCCCCCGGCGACCACTGGGGCAACTGGGCCTTCC 300
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      TCCTCTCCGCCGCCGCCTTCGGCACCTGGTCGGAGGAGTCCACGTCGTGGGGCGCCGCGC 317
consensus_6644#1      TCCTCTCCGCCGCCGCCTTCGGCACCTGGTCGGAGGAGTCCACGTCGTGGGGCGCCGCGC 360
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      TCAGCGGCTCGCTCGTCAGCATCATGGCCGGCCTGGCCGCCACGGCCACGGGTCTCGTCA 377
consensus_6644#1      TCAGCGGCTCGCTCGTCAGCA--------------------------------------- 381
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      CGGCCGGCGCGCCGGCGCAAGACGCCGTCATGGACTACCTGCTGCCGGCCACCGTCCCGC 437
consensus_6644#1      ------------------------------------------------------------
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      TCCTGCTTCTCGGCGCCGACCTCCGCCGCGTCGTCAGCACCACCGGCGACCTCCTCAAGG 497
consensus_6644#1      ---------------------------------------CCACCGGCGACCTCCTCAAGG 402
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      CCTTCCTCATCGGATCAGTTGCAACTACAATTGGCACAACGATAGCCTTTCTGTTGGTTC 557
consensus_6644#1      CCTTCCTCATCGGATCAGTTGCAACTACAATTGGCACAACGATAGCCTTTCTGTTGGTTC 462
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      CTATGAAATCACTGGGTCAAGATAGCTGGAAGATCGCCGCTGCGCTCATGGGCAGCTACA 617
consensus_6644#1      CTATGAAATCACTGGGTCAAGATAGCTGGAAGATCGCCGCTGCGCTCATGGGCAGCTACA 522
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      TTGGTGGAGCGGTGAATTACGTCGCAATCTCTGAAGCACTTGGCGTTTCTCCGTCAGTGC 677
consensus_6644#1      TTGGTGGAGCGGTGAATTACGTCGCAATCTCTGAAGCACTTGGCGTTTCTCCGTCAGTGC 582
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      TAGCAGCCGGTGTGGCTGCAGACAACATCATCTCTGCACTCTACTTCATGACCCTCTTCT 737
consensus_6644#1      TAGCAGCCGGTGTGGCTGCAGACAACATCATCTCTGCACTCTACTTCATGACCCTCTTCT 642
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      CGCTGGCAGCCAAGATACCAGCTGAACCTAAAACTGCTCAAGAGGGTAGTAACGGCGGCG 797
consensus_6644#1      CGCTGGCAGCCAAGATACCAGCTGAACCTAAAACTGCTCAAGAGGGTAGTAACGGCGGCG 702
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      AGTCTGAGGGCGGAAGGCGGATGTCGGTGCTCCATGGCGGCGCGGCGGTGGCGCTGTCGT 857
consensus_6644#1      AGTCTGAGGGCGGAAGGCGGATGTCGGTGCTCCATGGCGGCGCGGCGGTGGCGCTGTCGT 762
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      TCGTGATCTGCAAGGCCGGGTCGGCCATCTCCAGCCAGCTGGGAATCCAGGGCGGCACCC 917
consensus_6644#1      TCGTGATCTGCAAGGCCGGGTCGGCCATCTCCAGCCAGCTGGGAATCCAGGGCGGCACCC 822
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      TGCCGTGCGTGACGGCGCTGGTGGTGGCGCTGGCGACGGCGTTCCCGCGGCTGCTGGGGA 977
consensus_6644#1      TGCCGTGCGTGACGGCGCTGGTGGTGGCGCTGGCGACGGCGTTCCCGCGGCTGCTGGGGA 882
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      AGCTGGCGCCGTCCGGCGAGACCATCGCGCTGATCCTGATGCAGGTGTTCTTCACGGTGG 1037
consensus_6644#1      AGCTGGCGCCGTCCGGCGAGACCATCGCGCTGATCCTGATGCAGGTGTTCTTCACGGTGG 942
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      TGGGCGCCAACGGCAACCTGGTGGACGCGGTGACCAAGGCGCCCAGCGTGTTCGCGTTCG 1097
consensus_6644#1      TGGGCGCCAACGGCAACCTGGTGGACGCGGTGACCAAGGCGCCCAGCGTGTTCGCGTTCG 1002
consensus_6644#2      ------------------------------------------------------------
                                                                                  

consensus_6644#0      CGCTGGTGCAAGTGACCA-TCCACCTAGGCATCGTGCTC-GCCGCA-GGGAAGCTGATGG 1154
consensus_6644#1      CGCTGGTGCAAGTGACCA-TCCACCTAGGCATCGTGCTC-GCCGCA-GGGAAGCTGATGG 1059
consensus_6644#2      -----------GTGACCAGTCCACCTAGGCATCGTGCTCTGCCGCATGGGAAGCTGATGG 49
                                 ******* ******************** ****** *************

consensus_6644#0      GGTTCGAGCG---GAAGCCG--CTGCT-GATCGC-GTCCAAC--GCCAAC--GTGGGCGG 1203
consensus_6644#1      GGTTCGAGCG---GAAGCCG--CTGCT-GATCGC-GTCCAAC--GCCAAC--GTGGGCGG 1108
consensus_6644#2      GGTTCAGACGCAGGAAGCCAGCTTGCTTGATCGCAGTCCAAACAGCCAAACAGTGGNCAG 109
                      *****   **   ******    **** ****** ******   *****   **** * *

consensus_6644#0      GCCGACGACGG-------CGGCGG-CCATGGC-------GACGGCCAAGGGGTGGA-GCT 1247
consensus_6644#1      GCCGACGACGG-------CGGCGG-CCATGGC-------GACGGCCAAGGGGTGGA-GCT 1152
consensus_6644#2      GCCACAGACAGACCAGGTCAGCAGACCATTGNCAGACAGGACACAAAGGGGGTGGATGCT 169
                      ***   *** *       * ** * **** *        ***    * ******** ***

consensus_6644#0      CG---CTGATC--GTGCCGGGCA---TCCTGGTGG-GCA--TGTTC--GGGATCT-CCAT 1293
consensus_6644#1      CG---CTGATC--GTGCCGGGCA---TCCTGGTGG-GCA--TGTTC--GGGATCT-CCAT 1198
consensus_6644#2      TCAGCTTGATTCAGTCCAGGGCAATTCCTTGGTGGCGCAATTGTTTCAGGGATCTTCCAT 229
                            ****   ** * *****    * ****** ***  ****   ******* ****

consensus_6644#0      TGCCA-CGTTTGTTGGCATCGGGTTCGGCATGTTTGTGCTCAGGAGGATCTGCGGCGCCT 1352
consensus_6644#1      TGCCA-CGTTTGTTGGCATCGGGTTCGGCATGTTTGTGCTCAGGAGGATCTGCGGCGCCT 1257
consensus_6644#2      TGCCAACGTTTGTTGGCATCGGGTTCGCCATGTTTGTGCTCAGGAGGATCTGCGGCGCCT 289
                      ***** ********************* ********************************

consensus_6644#0      AACCAA-TCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAA 1411
consensus_6644#1      AACCAA-TCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAA 1316
consensus_6644#2      AACCAAATCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAAATAA 349
                      ****** *****************************************************

consensus_6644#0      TAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACA- 1470
consensus_6644#1      TAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACA- 1375
consensus_6644#2      TAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAAACAA 409
                      *********************************************************** 

consensus_6644#0      TTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTATT 1530
consensus_6644#1      TTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTA-- 1433
consensus_6644#2      TTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACTATT 469
                      **********************************************************  

consensus_6644#0      ATTATTAGAAGAAGAAGAAGA-------------------- 1551
consensus_6644#1      -----------------------------------------
consensus_6644#2      ATTATTAGAANNAGAAGAAGAAAAGTTTTCCAAAAAAAAAA 510
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)