cluster # 6673

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Oryza sativa
cluster # 6673 cluster # 6673 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6673#0 length = 758 sequences # 4

consensusID : consensus_6673#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 758
fasta sequence

                              [CACGGCGCCGGCAGCTTCCCGATGGCTCGGGTGCGGCAGATAATGCGGGCCGAGGACGCCACCATCCGCCCCTCCAATGAGGCTGTCTTCCTCATCAACAAGGCCACCGAGATATTCTTGAAGAGGTTTGCAGACGATGCTTATCGAAATGCTTTGAAGGATCGGAAGAAGTCAATTGTGTATGATAACCTTTCAACAGCAGTGTGCAACCAGAAAAGATACAAGTTTCTCTCAGATTTTGTTCCACAG-AAAG-TTA-CAGCTGAAGATGCTTTGAAGGCTCCA-GTTAGCAGCCAAGTGAACCAACCACAATAAGTTGCTAGTGCTCCGCGAGGGAGGTCATCCTTTCACGAGTTATCTCCTGGGAGGGTTCTGCAATTGTAAACGCCAGCTGTGCAGCTCATGTTGCCCTCAGGACTGGCATCTTGCGACATGTTCAATATGATTCTGATCAGAATCGGAGGCTTAAAAGAAGATTATAAGGGGAAACCTGAGTAATCTACATATGAAAGAAGCATGATGAAACTT-TTTGTCATGAGAATCACTTGAAATATGCTTGCTTAGAGCCTCAAATCAGGATCACCTTTTTGGCTGTG-TAAGCTGT-GGGTTGTGTGAGGTGGATGTAGCTTAGGCTAAATGTTACTGTGT-ATTTTTTTTTA-GATAATAC-GTTACTA-GTAGTATACATTTGT-GAGTTCTGACTTGTTCAT-GTACTA-GTT-CATTACATATATTTTCGCAGGTGCATGCTTTACCAATTAAAAAAA]

[+] EMBL AK103607             [CACGGCGCCGGCAGCTTCCCGATGGCTCGGGTGCGGCAGATAATGCGGGCCGAGGACGCCACCATCCGCCCCTCCAATGAGGCTGTCTTCCTCATCAACAAGGCCACCGAGATATTCTTGAAGAGGTTTGCAGACGATGCTTATCGAAATGCTTTGAAGGATCGGAAGAAGTCAATTGTGTATGATAACCTTTCAACAGCAGTGTGCAACCAGAAAAGATACAAGTTTCTCTCAGATTTTGTTCCACAG AAAG TTA CAGCTGAAGATGCTTTGAAGGCTCCA GTTAGCAGCCAAGTGAACCAACCACAATAAGTTGCTAGTGCTCCGCGAGGGAGGTCATCCTTTCACGAGTTATCTCCTGGGAGGGTTCTGCAATTGTAAACGCCAGCTGTGCAGCTCATGTTGCCCTCAGGACTGGCATCTTGCGACATGTTCAATATGATTCTGATCAGAATCGGAGGCTTAAAAGAAGATTATAAGGGGAAACCTGAGTAATCTACATATGAAAGAAGCATGATGAAACTT TTTGTCATGAGAATCACTTGAAATATGCTTGCTTAGAGCCTCAAATCAGGATCACCTTTTTGGCTGTG TAAGCTGT GGGTTGTGTGAGGTGGATGTAGCTTAGGCTAAATGTTACTGTGT ATTTTTTTTTA GATAATAC GTTACTA GTAGTATACATTTGT GAGTTCTGACTTGTTCAT GTACTA GTT CATTACATATATTTTCGCAGGTGCATGCTTTACCAATTAc     ]
[+] EMBL BM420647             [                                                                                                                                                                                                                                         gatTTTTGTTCCCCAGAAAAGTTTACCAGCTGAAGATGCTTTGAAGGCTCCACGTTANCA CCAAGTGAACCAACCCCCATAAGTTGCTAGTGCTCCGCGAGGGAGGTCATCCTTTCACGAGTTATCTCCTGGGAGGGTTCTGCCATTGTAAACGCCAGCTGT CAGCTCATGTTGCCCTCAGGACTGGCATCTTGCGACATGTTCAATATGATTCTGATCAGAATCGGAGGCTTAAAAGAAGATTATAAGGGGAAACCTGAGTAATCTACATATGAAAGAAGCATGATGAAACTTNTTTGTCATGAGAATCACTTGAAATATGCTTGCTTAGAGCCTC AATCAGGATCACCTTTTTGGCTGTGCTAA CTGT GGGTTGTGTGAGGTGGATGTAGCTTAGGCTAAATGTTACTGTGT A TTTTTTTTA GATAATAC GTTACTA GTAGTATACATTTGT GAGTTCTGACTTGTTCAT GTACTA GTT CATTACATATATTTTCGCAGGTGCCNGCTTTACCCAAAAAAAAAA]
[+] EMBL OSC1651              [                                                                                                                                                                                                                                                                                                                   CCACAATAAGTTGCTAGTGCTCCGCGAGGGAGGTCATCCTTTCACGAGTTATCTCCTGGGAGGGTTCTGCAATTGTAAACGCCAGCTGTGCAGCTCATGTTGCCCTCAGGACTGGCATCTTGCGACATGTTCAATATGATTCTGATCAGAATCGGAGGCTTAAAAGAAGATTATAAGGGGAAACCTGAGTAATCTACATATGAAAGAAGCATGATGAAACTT TTTGTCATGAGAATCACTTGAAATATGCTTGCTTAGAGCCTCAAATCAGGATCACCTTTTTGGCTGTG TAAGCTGTNGGGTTGTGTGAGGTGGATGTAGCTTAGGCTAAATGTTACTGTGTAATTTTTTTTTAGGATAATACGGTTACTAGGTAGTATACATTTGTGGAGTTCTGACTTGTTCATGGTACTAGGTTCCATTACATATATTTTCGCAGG                        ]
[+] EMBL AU101355             [                                                                                                                                                                                                                                                                                                                    CACAATAAGTTGCTAGTGCTCCGCGAGGGAGGTCATCCTTTCACGAGTTATCTCCTGGGAGGGTTCTGCAATTGTAAACGCCAGCTGTGCAGCTCATGTTGCCCTCAGGACTGGCATCTTGCGACATGTTCAATATGATTCTGATCAGAATCGGAGGCTTAAAAGAAGATTATAAGGGGAAACCTGAGTAATCTACATATGAAAGAAGCATGATGAAACTT TTTGTCATGAGAATCACTTGAAATATGCTTGCTTAGAGCCTCAAATCAGGATCACCTTTTTGGCTGTG TAAGCTGT GGGTTGTGTGAGGTGGATGTAGCTTAGGCTAAATGTTACTGTGT ATTTTTTTTTA GATAATAC GTTACTA GTAGTATACATTTGT GAGTTCTGACTTGTTCAT GTACTA GTT CATTACATATATTTTCGCAGGTGCATGCTTTACCAATTAAAAA  ]




>consensus_6673#0
CACGGCGCCGGCAGCTTCCCGATGGCTCGGGTGCGGCAGATAATGCGGGCCGAGGACGCC
ACCATCCGCCCCTCCAATGAGGCTGTCTTCCTCATCAACAAGGCCACCGAGATATTCTTG
AAGAGGTTTGCAGACGATGCTTATCGAAATGCTTTGAAGGATCGGAAGAAGTCAATTGTG
TATGATAACCTTTCAACAGCAGTGTGCAACCAGAAAAGATACAAGTTTCTCTCAGATTTT
GTTCCACAGAAAGTTACAGCTGAAGATGCTTTGAAGGCTCCAGTTAGCAGCCAAGTGAAC
CAACCACAATAAGTTGCTAGTGCTCCGCGAGGGAGGTCATCCTTTCACGAGTTATCTCCT
GGGAGGGTTCTGCAATTGTAAACGCCAGCTGTGCAGCTCATGTTGCCCTCAGGACTGGCA
TCTTGCGACATGTTCAATATGATTCTGATCAGAATCGGAGGCTTAAAAGAAGATTATAAG
GGGAAACCTGAGTAATCTACATATGAAAGAAGCATGATGAAACTTTTTGTCATGAGAATC
ACTTGAAATATGCTTGCTTAGAGCCTCAAATCAGGATCACCTTTTTGGCTGTGTAAGCTG
TGGGTTGTGTGAGGTGGATGTAGCTTAGGCTAAATGTTACTGTGTATTTTTTTTTAGATA
ATACGTTACTAGTAGTATACATTTGTGAGTTCTGACTTGTTCATGTACTAGTTCATTACA
TATATTTTCGCAGGTGCATGCTTTACCAATTAAAAAAA

clustalw multiple alignements is not computed in this case