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Oryza sativa
cluster # 6688 cluster # 6688       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6688#0 length = 1785 sequences # 3  
consensus_6688#1 length = 1556 sequences # 1  

consensusID : consensus_6688#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1785
fasta sequence
                              [AGAAAATTTACCAGGAGATTGCAGGAGACTAGAGAGCGCCACTCCCAATGGGGAGTAGGAGCAGAGGAGGGAGACACCTCCTCCTCCTCCTCCTGCTTCACCTCCTCTCCCTCCATTCCTCTCTGCTACCATGGGCGGCGGTGTCGGCGGCGGGAGGGGGTGGTTCCGGAGACCCGTACGTCGGCGTGACGATCGGGACGGCGGTGACGAACCTGCTGTCGCCGTCGGACCTCCCCGAGTTCCTCCGCGCGCAGCGCATCACCCACGTGCGCCTCTACGACGCCGACCCGCGCATGCTGTCGGCGCTAGCGTCGTCGGGCGCCCGCGCCATCGTCGGCGTCCCCAACGACGAGCTCCTCGCGCTGGGCTCCTCCCCGGCCACCGCCTCCGCCTGGGTCGCCCGCCGCGTGCTCCCCTACGCCGGCGCCAACTCCAGCACCCCGGGGCTCATCGCCGCCATCGCCGTCGGCGACGAGGTCCCCACCGCGCTCCCCTCCGCGCTCCCCGTGCTCCTCCCGGCCATCCAGTCCCTCGCTGCCGCGCTCGCCGCCGCCAACCTCTCCTCCATCCCGGTCTCCACACCGCTCCCCTTCTCCGTCGTCCTCGACCCGTTCCCACCCTCCCAGGCCTTCTTCAACCAGTCGCTGGCCAAGTCGTTCATTCTCCCGCTCCTCTCCCACCTCGCCAACACCTCGGCGCCGCTCATGCTCAACCTCTACCCGTACTACTCCATGATGCAGAGCAACGGCGTGATCCCGCTCGACAACGCGCTGTTCAAGCCGCTCCCGCCGTCGCTGGAGATGGTCGACCCCAACACGCTGCTCCACTACACCAACGTGTTCGACGCGATGCTCGACGCGGTGCACGTCGCCGTGAAGAACCTCAACGCGACCGGCGGCGGCGGGCCGGTGCCGGTGCTGGTCACGGAGACCGGGTGGCCGTCGTACGGGGACCGCAGGGCGGAGCCGTACGCCACGCGGGACAACGCCGACGCCTACAACTCCAACCTCATCAAGCACGTCAACGACAAGCCCGGCACGCCGATGCGCCCCGGCGCGCAGGCCAGCGTCTACATCTACGAGCTCTTCAACGAGGACCTCCGCCCGGGCCCGGTCTCGGAGGCGAACTGGGGACTCTTCCACGGCAACGGCACGCCGGTGTACCTGCTCCACGTGTCCGGCGCCGGCGGCTTCCTGGCCAACGACACGACGGACCGGACGTTCTGCATCGCGTCCGACGACGCCGACGAGAAGGCGGTGCAGGCGGCCATGGACTGGGCGTGCGGCCCCGGGCGCACCGACTGCACGGCGATCCAGCCAGGGCAAGGCTGCTACGAGCCCAACGATGTGCGGAGCCACGCCTCCTTCGCATTCGACAGCTACTACCAGTCGCAGGGCAAGGCCGCTGGCTCCTGCTACTTCCAGGGCGTCGGCATGGTCACCACCACTGATCCCAGTCACGATAGCTGCATCTTTCCAGGAAGCAAGCTGTTGAGCAACGTCACCAAATCTGACGGGGCAAACACAACCACTGCGCAGACGAGTGATGCAGAGGGCTCTGCAATATGGAGGCTAAGAACTGGAAGGGAGACAGGGTTCTTGTTCATCCTCCGGTGGTTGTTGAGCTTGTCAGTGGTGCTTATCACGACGAATTCAAACTTTTGGACATGACAAGAGCATGTAGATTGTAACAAAAATGGAATTTTTGGGATGACACTTTAGAGGAGCAGGCAGGGGCTGTATGTTTAGTGATTCTTTATTGTTAGATAAGCGTCAATAAATCATT]

[+] EMBL AK063956             [AGAAAATTTACCAGGAGATTGCAGGAGACTAGAGAGCGCCACTCCCAATGGGGAGTAGGAGCAGAGGAGGGAGACACCTCCTCCTCCTCCTCCTGCTTCACCTCCTCTCCCTCCATTCCTCTCTGCTACCATGGGCGGCGGTGTCGGCGGCGGGAGGGGGTGGTTCCGGAGACCCGTACGTCGGCGTGACGATCGGGACGGCGGTGACGAACCTGCTGTCGCCGTCGGACCTCCCCGAGTTCCTCCGCGCGCAGCGCATCACCCACGTGCGCCTCTACGACGCCGACCCGCGCATGCTGTCGGCGCTAGCGTCGTCGGGCGCCCGCGCCATCGTCGGCGTCCCCAACGACGAGCTCCTCGCGCTGGGCTCCTCCCCGGCCACCGCCTCCGCCTGGGTCGCCCGCCGCGTGCTCCCCTACGCCGGCGCCAACTCCAGCACCCCGGGGCTCATCGCCGCCATCGCCGTCGGCGACGAGGTCCCCACCGCGCTCCCCTCCGCGCTCCCCGTGCTCCTCCCGGCCATCCAGTCCCTCGCTGCCGCGCTCGCCGCCGCCAACCTCTCCTCCATCCCGGTCTCCACACCGCTCCCCTTCTCCGTCGTCCTCGACCCGTTCCCACCCTCCCAGGCCTTCTTCAACCAGTCGCTGGCCAAGTCGTTCATTCTCCCGCTCCTCTCCCACCTCGCCAACACCTCGGCGCCGCTCATGCTCAACCTCTACCCGTACTACTCCATGATGCAGAGCAACGGCGTGATCCCGCTCGACAACGCGCTGTTCAAGCCGCTCCCGCCGTCGCTGGAGATGGTCGACCCCAACACGCTGCTCCACTACACCAACGTGTTCGACGCGATGCTCGACGCGGTGCACGTCGCCGTGAAGAACCTCAACGCGACCGGCGGCGGCGGGCCGGTGCCGGTGCTGGTCACGGAGACCGGGTGGCCGTCGTACGGGGACCGCAGGGCGGAGCCGTACGCCACGCGGGACAACGCCGACGCCTACAACTCCAACCTCATCAAGCACGTCAACGACAAGCCCGGCACGCCGATGCGCCCCGGCGCGCAGGCCAGCGTCTACATCTACGAGCTCTTCAACGAGGACCTCCGCCCGGGCCCGGTCTCGGAGGCGAACTGGGGACTCTTCCACGGCAACGGCACGCCGGTGTACCTGCTCCACGTGTCCGGCGCCGGCGGCTTCCTGGCCAACGACACGACGGACCGGACGTTCTGCATCGCGTCCGACGACGCCGACGAGAAGGCGGTGCAGGCGGCCATGGACTGGGCGTGCGGCCCCGGGCGCACCGACTGCACGGCGATCCAGCCAGGGCAAGGCTGCTACGAGCCCAACGATGTGCGGAGCCACGCCTCCTTCGCATTCGACAGCTACTACCAGTCGCAGGGCAAGGCCGCTGGCTCCTGCTACTTCCAGGGCGTCGGCATGGTCACCACCACTGATCCCAGTCACGATAGCTGCATCTTTCCAGGAAGCAAGCTGTTGAGCAACGTCACCAAATCTGACGGGGCAAACACAACCACTGCGCAGACGAGTGATGCAGAGGGCTCTGCAATATGGAGGCTAAGAACTGGAAGGGAGACAGGGTTCTTGTTCATCCTCCGGTGGTTGTTGAGCTTGTCAGTGGTGCTTATCACGACGAATTCAAACTTTTGGACATGACAAGAGCATGTAGATTGTAACAAAAATGGAATTTTTGGGATGACACTTTAGAGGAGCAGGCAGGGGCTGTATGTTTAGTGATTCTTTATTGTTAGATAAGCGTCAATAAATCATT]
[+] EMBL AK101250             [                              AGAGAGCGCCACTCCCAATGGGGAGTAGGAGCAGAGGAGGGAGACACCTCCTCCTCCTCCTCCTGCTTCACCTCCTCTCCCTCCATTCCTCTCTGCTACCATGGGCGGCGGTGTCGGCGGCGGGAGGGGGTGGTTCCGGAGACCCGTACGTCGGCGTGACGATCGGGACGGCGGTGACGAACCTGCTGTCGCCGTCGGACCTCCCCGAGTTCCTCCGCGCGCAGCGCATCACCCACGTGCGCCTCTACGACGCCGACCCGCGCATGCTGTCGGCGCTAGCGTCGTCGGGCGCCCGCGCCATCGTCGGCGTCCCCAACGACGAGCTCCTCGCGCTGGGCTCCTCCCCGGCCACCGCCTCCGCCTGGGTCGCCCGCCGCGTGCTCCCCTACGCCGGCGCCAACTCCAGCACCCCGGGGCTCATCGCCGCCATCGCCGTCGGCGACGAGGTCCCCACCGCGCTCCCCTCCGCGCTCCCCGTGCTCCTCCCGGCCATCCAGTCCCTCGCTGCCGCGCTCGCCGCCGCCAACCTCTCCTCCATCCCGGTCTCCACACCGCTCCCCTTCTCCGTCGTCCTCGACCCGTTCCCACCCTCCCAGGCCTTCTTCAACCAGTCGCTGGCCAAGTCGTTCATTCTCCCGCTCCTCTCCCACCTCGCCAACACCTCGGCGCCGCTCATGCTCAACCTCTACCCGTACTACTCCATGATGCAGAGCAACGGCGTGATCCCGCTCGACAACGCGCTGTTCAAGCCGCTCCCGCCGTCGCTGGAGATGGTCGACCCCAACACGCTGCTCCACTACACCAACGTGTTCGACGCGATGCTCGACGCGGTGCACGTCGCCGTGAAGAACCTCAACGCGACCGGCGGCGGCGGGCCGGTGCCGGTGCTGGTCACGGAGACCGGGTGGCCGTCGTACGGGGACCGCAGGGCGGAGCCGTACGCCACGCGGGACAACGCCGACGCCTACAACTCCAACCTCATCAAGCACGTCAACGACAAGCCCGGCACGCCGATGCGCCCCGGCGCGCAGGCCAGCGTCTACATCTACGAGCTCTTCAACGAGGACCTCCGCCCGGGCCCGGTCTCGGAGGCGAACTGGGGACTCTTCCACGGCAACGGCACGCCGGTGTACCTGCTCCACGTGTCCGGCGCCGGCGGCTTCCTGGCCAACGACACGACGGACCGGACGTTCTGCATCGCGTCCGACGACGCCGACGAGAAGGCGGTGCAGGCGGCCATGGACTGGGCGTGCGGCCCCGGGCGCACCGACTGCACGGCGATCCAGCCAGGGCAAGGCTGCTACGAGCCCAACGATGTGCGGAGCCACGCCTCCTTCGCATTCGACAGCTACTACCAGTCGCAGGGCAAGGCCGCTGGCTCCTGCTACTTCCAGGGCGTCGGCATGGTCACCACCACTGATCCCAGTCACGATAGCTGCATCTTTCCAGGAAGCAAGCTGTTGAGCAACGTCACCAAATCTGACGGGGCAAACACAACCACTGCGCAGACGAGTGATGCAGAGGGCTCTGCAATATGGAGGCTAAGAACTGGAAGGGAGACAGGGTTCTTGTTCATCCTCCGGTGGTTGTTGAGCTTGTCAGTGGTGCTTATCACGACGAATTCAAACTTTTGGACATGACAAGAGCATGTAGATTGTAACAAAAATGGAATTTTTGGGATGACACTTTAGAGGAGCAGGCAGGGGCTGTATGTTTAGTGATT                                ]
[+] EMBL CB683597             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGCTCATCACGACGAATTCAAACTTTTGGACATGACAAGAGCATGTAGATTGTAACAAAAATGGAATTTTTGGGATGACACTTTAGAGGAGCAGGCAGGGGCTGTATGTTTAGTGATTCTTTATTGTTAGATAAGCGTCAATAAATCATT]


>consensus_6688#0 AGAAAATTTACCAGGAGATTGCAGGAGACTAGAGAGCGCCACTCCCAATGGGGAGTAGGA GCAGAGGAGGGAGACACCTCCTCCTCCTCCTCCTGCTTCACCTCCTCTCCCTCCATTCCT CTCTGCTACCATGGGCGGCGGTGTCGGCGGCGGGAGGGGGTGGTTCCGGAGACCCGTACG TCGGCGTGACGATCGGGACGGCGGTGACGAACCTGCTGTCGCCGTCGGACCTCCCCGAGT TCCTCCGCGCGCAGCGCATCACCCACGTGCGCCTCTACGACGCCGACCCGCGCATGCTGT CGGCGCTAGCGTCGTCGGGCGCCCGCGCCATCGTCGGCGTCCCCAACGACGAGCTCCTCG CGCTGGGCTCCTCCCCGGCCACCGCCTCCGCCTGGGTCGCCCGCCGCGTGCTCCCCTACG CCGGCGCCAACTCCAGCACCCCGGGGCTCATCGCCGCCATCGCCGTCGGCGACGAGGTCC CCACCGCGCTCCCCTCCGCGCTCCCCGTGCTCCTCCCGGCCATCCAGTCCCTCGCTGCCG CGCTCGCCGCCGCCAACCTCTCCTCCATCCCGGTCTCCACACCGCTCCCCTTCTCCGTCG TCCTCGACCCGTTCCCACCCTCCCAGGCCTTCTTCAACCAGTCGCTGGCCAAGTCGTTCA TTCTCCCGCTCCTCTCCCACCTCGCCAACACCTCGGCGCCGCTCATGCTCAACCTCTACC CGTACTACTCCATGATGCAGAGCAACGGCGTGATCCCGCTCGACAACGCGCTGTTCAAGC CGCTCCCGCCGTCGCTGGAGATGGTCGACCCCAACACGCTGCTCCACTACACCAACGTGT TCGACGCGATGCTCGACGCGGTGCACGTCGCCGTGAAGAACCTCAACGCGACCGGCGGCG GCGGGCCGGTGCCGGTGCTGGTCACGGAGACCGGGTGGCCGTCGTACGGGGACCGCAGGG CGGAGCCGTACGCCACGCGGGACAACGCCGACGCCTACAACTCCAACCTCATCAAGCACG TCAACGACAAGCCCGGCACGCCGATGCGCCCCGGCGCGCAGGCCAGCGTCTACATCTACG AGCTCTTCAACGAGGACCTCCGCCCGGGCCCGGTCTCGGAGGCGAACTGGGGACTCTTCC ACGGCAACGGCACGCCGGTGTACCTGCTCCACGTGTCCGGCGCCGGCGGCTTCCTGGCCA ACGACACGACGGACCGGACGTTCTGCATCGCGTCCGACGACGCCGACGAGAAGGCGGTGC AGGCGGCCATGGACTGGGCGTGCGGCCCCGGGCGCACCGACTGCACGGCGATCCAGCCAG GGCAAGGCTGCTACGAGCCCAACGATGTGCGGAGCCACGCCTCCTTCGCATTCGACAGCT ACTACCAGTCGCAGGGCAAGGCCGCTGGCTCCTGCTACTTCCAGGGCGTCGGCATGGTCA CCACCACTGATCCCAGTCACGATAGCTGCATCTTTCCAGGAAGCAAGCTGTTGAGCAACG TCACCAAATCTGACGGGGCAAACACAACCACTGCGCAGACGAGTGATGCAGAGGGCTCTG CAATATGGAGGCTAAGAACTGGAAGGGAGACAGGGTTCTTGTTCATCCTCCGGTGGTTGT TGAGCTTGTCAGTGGTGCTTATCACGACGAATTCAAACTTTTGGACATGACAAGAGCATG TAGATTGTAACAAAAATGGAATTTTTGGGATGACACTTTAGAGGAGCAGGCAGGGGCTGT ATGTTTAGTGATTCTTTATTGTTAGATAAGCGTCAATAAATCATT



consensusID : consensus_6688#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1556
fasta sequence
                              [TGGGGAGTAGGAGCAGAGGAGGGAGACACCTCCTCCTCCTCCTCCTGCTTCACCTCCTCTCCCTCCATTCCTCTCTGCTACCATGGGCGGCGGTGTCGGCGGCGGGAGGGGGTGGTTCCGGAGACCCGTACGTCGGCGTGACGATCGGGACGGCGGTGACGAACCTGCTGTCGCCGTCGGACCTCCCCGAGTTCCTCCGCGCGCAGCGCATCACCCACGTGCGCCTCTACGACGCCGACCCGCGCATGCTGTCGGCGCTAGCGTCGTCGGGCGCCCGCGCCTTCGTCGGCGTCCCCAACGACGAGCTCCTCGCGCTGGGCTCCTCCCCGGCCACCGCCTCCGCCTGGGTCGCCCGCCGCGTGCTCCCCTACGCCGGCGCCAACTCCAGCACCCCGGGGCTCATCGCCGCCATCGCCGTCGGCGACGAGGTCCCCACCGCGCTCCCCTCCGCGCTCCCCGTGCTCCTCCCGGCCATCCAGTCCCTCGCTGCCGCGCTCGCCGCCGCCAACCTCTCCTCCATCCCGGTCTCCACACCGCTCCCCTTCTCCGTCGTCCTCGACCCGTTCCCACCCTCCCAGGCCTTCTTCAACCAGTCGCTGGCCAAGTCGTTCATTCTCCCGCTCCTCTCCCACCTCGCCAACACCTCGGCGCCGCTCATGCTCAACCTCTACCCGTACTACTCCATGATGCAGAGCAACGGCGTGATCCCGCTCGACAACGCGCTGTTCAAGCCGCTCCCGCCGTCGCTGGAGATGGTCGACCCCAACACGCTGCTCCACTACACCAACGTGTTCGACGCGATGCTCGACGCGGTGCACGTCGCCGTGAAGAACCTCAACGCGACCGGCGGCGGCGGGCCGGTGCCGGTGCTGGTCACGGAGACCGGGTGGCCGTCGTACGGGGACCGCAGGGCGGAGCCGTACGCCACGCGGGACAACGCCGACGCCTACAACTCCAACCTCATCAAGCACGTCAACGACAAGCCCGGCACGCCGATGCGCCCCGGCGCGCAGGCCAGCGTCTACATCTACGAGCTCTTCAACGAGGACCTCCGCCCGGGCCCGGTCTCGGAGGCGAACTGGGGACTCTTCCACGGCAACGGCACGCCGGTGTACCTGCTCCACGTGTCCGGCGCCGGCGGCTTCCTGGCCAACGACACGACGGACCGGACGTTCTGCATCGCGTCCGACGACGCCGACGAGAAGGCGGTGCAGGCGGCCATGGACTGGGCGTGCGGCCCCGGGCGCACCGACTGCACGGCGATCCAGCCAGGGCAAGGCTGCTACGAGCCCAACGATGTGCGGAGCCACGCCTCCTTCGCATTCGACAGCTACTACCAGTCGCAGGGCAAGGCCGCTGGCTCCTGCTACTTCCAGGGCGTCGGCATGGTCACCACCACTGATCCCAGTGAGTATACCCCTCCTCAACACTGCCATTTCTTCCTCATTGCTTATGCATTTAGGTTCTTTCTTCTTTTCATGTTTTCAGTTTTAACAGTTTTTGATCTGTTCATTCATGTTTGCTTGGAATTGGAAGGATTTAGTAGAAGTGCTTGC]

[+] EMBL AK069383             [TGGGGAGTAGGAGCAGAGGAGGGAGACACCTCCTCCTCCTCCTCCTGCTTCACCTCCTCTCCCTCCATTCCTCTCTGCTACCATGGGCGGCGGTGTCGGCGGCGGGAGGGGGTGGTTCCGGAGACCCGTACGTCGGCGTGACGATCGGGACGGCGGTGACGAACCTGCTGTCGCCGTCGGACCTCCCCGAGTTCCTCCGCGCGCAGCGCATCACCCACGTGCGCCTCTACGACGCCGACCCGCGCATGCTGTCGGCGCTAGCGTCGTCGGGCGCCCGCGCCTTCGTCGGCGTCCCCAACGACGAGCTCCTCGCGCTGGGCTCCTCCCCGGCCACCGCCTCCGCCTGGGTCGCCCGCCGCGTGCTCCCCTACGCCGGCGCCAACTCCAGCACCCCGGGGCTCATCGCCGCCATCGCCGTCGGCGACGAGGTCCCCACCGCGCTCCCCTCCGCGCTCCCCGTGCTCCTCCCGGCCATCCAGTCCCTCGCTGCCGCGCTCGCCGCCGCCAACCTCTCCTCCATCCCGGTCTCCACACCGCTCCCCTTCTCCGTCGTCCTCGACCCGTTCCCACCCTCCCAGGCCTTCTTCAACCAGTCGCTGGCCAAGTCGTTCATTCTCCCGCTCCTCTCCCACCTCGCCAACACCTCGGCGCCGCTCATGCTCAACCTCTACCCGTACTACTCCATGATGCAGAGCAACGGCGTGATCCCGCTCGACAACGCGCTGTTCAAGCCGCTCCCGCCGTCGCTGGAGATGGTCGACCCCAACACGCTGCTCCACTACACCAACGTGTTCGACGCGATGCTCGACGCGGTGCACGTCGCCGTGAAGAACCTCAACGCGACCGGCGGCGGCGGGCCGGTGCCGGTGCTGGTCACGGAGACCGGGTGGCCGTCGTACGGGGACCGCAGGGCGGAGCCGTACGCCACGCGGGACAACGCCGACGCCTACAACTCCAACCTCATCAAGCACGTCAACGACAAGCCCGGCACGCCGATGCGCCCCGGCGCGCAGGCCAGCGTCTACATCTACGAGCTCTTCAACGAGGACCTCCGCCCGGGCCCGGTCTCGGAGGCGAACTGGGGACTCTTCCACGGCAACGGCACGCCGGTGTACCTGCTCCACGTGTCCGGCGCCGGCGGCTTCCTGGCCAACGACACGACGGACCGGACGTTCTGCATCGCGTCCGACGACGCCGACGAGAAGGCGGTGCAGGCGGCCATGGACTGGGCGTGCGGCCCCGGGCGCACCGACTGCACGGCGATCCAGCCAGGGCAAGGCTGCTACGAGCCCAACGATGTGCGGAGCCACGCCTCCTTCGCATTCGACAGCTACTACCAGTCGCAGGGCAAGGCCGCTGGCTCCTGCTACTTCCAGGGCGTCGGCATGGTCACCACCACTGATCCCAGTGAGTATACCCCTCCTCAACACTGCCATTTCTTCCTCATTGCTTATGCATTTAGGTTCTTTCTTCTTTTCATGTTTTCAGTTTTAACAGTTTTTGATCTGTTCATTCATGTTTGCTTGGAATTGGAAGGATTTAGTAGAAGTGCTTGC]


>consensus_6688#1 TGGGGAGTAGGAGCAGAGGAGGGAGACACCTCCTCCTCCTCCTCCTGCTTCACCTCCTCT CCCTCCATTCCTCTCTGCTACCATGGGCGGCGGTGTCGGCGGCGGGAGGGGGTGGTTCCG GAGACCCGTACGTCGGCGTGACGATCGGGACGGCGGTGACGAACCTGCTGTCGCCGTCGG ACCTCCCCGAGTTCCTCCGCGCGCAGCGCATCACCCACGTGCGCCTCTACGACGCCGACC CGCGCATGCTGTCGGCGCTAGCGTCGTCGGGCGCCCGCGCCTTCGTCGGCGTCCCCAACG ACGAGCTCCTCGCGCTGGGCTCCTCCCCGGCCACCGCCTCCGCCTGGGTCGCCCGCCGCG TGCTCCCCTACGCCGGCGCCAACTCCAGCACCCCGGGGCTCATCGCCGCCATCGCCGTCG GCGACGAGGTCCCCACCGCGCTCCCCTCCGCGCTCCCCGTGCTCCTCCCGGCCATCCAGT CCCTCGCTGCCGCGCTCGCCGCCGCCAACCTCTCCTCCATCCCGGTCTCCACACCGCTCC CCTTCTCCGTCGTCCTCGACCCGTTCCCACCCTCCCAGGCCTTCTTCAACCAGTCGCTGG CCAAGTCGTTCATTCTCCCGCTCCTCTCCCACCTCGCCAACACCTCGGCGCCGCTCATGC TCAACCTCTACCCGTACTACTCCATGATGCAGAGCAACGGCGTGATCCCGCTCGACAACG CGCTGTTCAAGCCGCTCCCGCCGTCGCTGGAGATGGTCGACCCCAACACGCTGCTCCACT ACACCAACGTGTTCGACGCGATGCTCGACGCGGTGCACGTCGCCGTGAAGAACCTCAACG CGACCGGCGGCGGCGGGCCGGTGCCGGTGCTGGTCACGGAGACCGGGTGGCCGTCGTACG GGGACCGCAGGGCGGAGCCGTACGCCACGCGGGACAACGCCGACGCCTACAACTCCAACC TCATCAAGCACGTCAACGACAAGCCCGGCACGCCGATGCGCCCCGGCGCGCAGGCCAGCG TCTACATCTACGAGCTCTTCAACGAGGACCTCCGCCCGGGCCCGGTCTCGGAGGCGAACT GGGGACTCTTCCACGGCAACGGCACGCCGGTGTACCTGCTCCACGTGTCCGGCGCCGGCG GCTTCCTGGCCAACGACACGACGGACCGGACGTTCTGCATCGCGTCCGACGACGCCGACG AGAAGGCGGTGCAGGCGGCCATGGACTGGGCGTGCGGCCCCGGGCGCACCGACTGCACGG CGATCCAGCCAGGGCAAGGCTGCTACGAGCCCAACGATGTGCGGAGCCACGCCTCCTTCG CATTCGACAGCTACTACCAGTCGCAGGGCAAGGCCGCTGGCTCCTGCTACTTCCAGGGCG TCGGCATGGTCACCACCACTGATCCCAGTGAGTATACCCCTCCTCAACACTGCCATTTCT TCCTCATTGCTTATGCATTTAGGTTCTTTCTTCTTTTCATGTTTTCAGTTTTAACAGTTT TTGATCTGTTCATTCATGTTTGCTTGGAATTGGAAGGATTTAGTAGAAGTGCTTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6688#0      AGAAAATTTACCAGGAGATTGCAGGAGACTAGAGAGCGCCACTCCCAATGGGGAGTAGGA 60
consensus_6688#1      ------------------------------------------------TGGGGAGTAGGA 12
                                                                      ************

consensus_6688#0      GCAGAGGAGGGAGACACCTCCTCCTCCTCCTCCTGCTTCACCTCCTCTCCCTCCATTCCT 120
consensus_6688#1      GCAGAGGAGGGAGACACCTCCTCCTCCTCCTCCTGCTTCACCTCCTCTCCCTCCATTCCT 72
                      ************************************************************

consensus_6688#0      CTCTGCTACCATGGGCGGCGGTGTCGGCGGCGGGAGGGGGTGGTTCCGGAGACCCGTACG 180
consensus_6688#1      CTCTGCTACCATGGGCGGCGGTGTCGGCGGCGGGAGGGGGTGGTTCCGGAGACCCGTACG 132
                      ************************************************************

consensus_6688#0      TCGGCGTGACGATCGGGACGGCGGTGACGAACCTGCTGTCGCCGTCGGACCTCCCCGAGT 240
consensus_6688#1      TCGGCGTGACGATCGGGACGGCGGTGACGAACCTGCTGTCGCCGTCGGACCTCCCCGAGT 192
                      ************************************************************

consensus_6688#0      TCCTCCGCGCGCAGCGCATCACCCACGTGCGCCTCTACGACGCCGACCCGCGCATGCTGT 300
consensus_6688#1      TCCTCCGCGCGCAGCGCATCACCCACGTGCGCCTCTACGACGCCGACCCGCGCATGCTGT 252
                      ************************************************************

consensus_6688#0      CGGCGCTAGCGTCGTCGGGCGCCCGCGCCATCGTCGGCGTCCCCAACGACGAGCTCCTCG 360
consensus_6688#1      CGGCGCTAGCGTCGTCGGGCGCCCGCGCCTTCGTCGGCGTCCCCAACGACGAGCTCCTCG 312
                      ***************************** ******************************

consensus_6688#0      CGCTGGGCTCCTCCCCGGCCACCGCCTCCGCCTGGGTCGCCCGCCGCGTGCTCCCCTACG 420
consensus_6688#1      CGCTGGGCTCCTCCCCGGCCACCGCCTCCGCCTGGGTCGCCCGCCGCGTGCTCCCCTACG 372
                      ************************************************************

consensus_6688#0      CCGGCGCCAACTCCAGCACCCCGGGGCTCATCGCCGCCATCGCCGTCGGCGACGAGGTCC 480
consensus_6688#1      CCGGCGCCAACTCCAGCACCCCGGGGCTCATCGCCGCCATCGCCGTCGGCGACGAGGTCC 432
                      ************************************************************

consensus_6688#0      CCACCGCGCTCCCCTCCGCGCTCCCCGTGCTCCTCCCGGCCATCCAGTCCCTCGCTGCCG 540
consensus_6688#1      CCACCGCGCTCCCCTCCGCGCTCCCCGTGCTCCTCCCGGCCATCCAGTCCCTCGCTGCCG 492
                      ************************************************************

consensus_6688#0      CGCTCGCCGCCGCCAACCTCTCCTCCATCCCGGTCTCCACACCGCTCCCCTTCTCCGTCG 600
consensus_6688#1      CGCTCGCCGCCGCCAACCTCTCCTCCATCCCGGTCTCCACACCGCTCCCCTTCTCCGTCG 552
                      ************************************************************

consensus_6688#0      TCCTCGACCCGTTCCCACCCTCCCAGGCCTTCTTCAACCAGTCGCTGGCCAAGTCGTTCA 660
consensus_6688#1      TCCTCGACCCGTTCCCACCCTCCCAGGCCTTCTTCAACCAGTCGCTGGCCAAGTCGTTCA 612
                      ************************************************************

consensus_6688#0      TTCTCCCGCTCCTCTCCCACCTCGCCAACACCTCGGCGCCGCTCATGCTCAACCTCTACC 720
consensus_6688#1      TTCTCCCGCTCCTCTCCCACCTCGCCAACACCTCGGCGCCGCTCATGCTCAACCTCTACC 672
                      ************************************************************

consensus_6688#0      CGTACTACTCCATGATGCAGAGCAACGGCGTGATCCCGCTCGACAACGCGCTGTTCAAGC 780
consensus_6688#1      CGTACTACTCCATGATGCAGAGCAACGGCGTGATCCCGCTCGACAACGCGCTGTTCAAGC 732
                      ************************************************************

consensus_6688#0      CGCTCCCGCCGTCGCTGGAGATGGTCGACCCCAACACGCTGCTCCACTACACCAACGTGT 840
consensus_6688#1      CGCTCCCGCCGTCGCTGGAGATGGTCGACCCCAACACGCTGCTCCACTACACCAACGTGT 792
                      ************************************************************

consensus_6688#0      TCGACGCGATGCTCGACGCGGTGCACGTCGCCGTGAAGAACCTCAACGCGACCGGCGGCG 900
consensus_6688#1      TCGACGCGATGCTCGACGCGGTGCACGTCGCCGTGAAGAACCTCAACGCGACCGGCGGCG 852
                      ************************************************************

consensus_6688#0      GCGGGCCGGTGCCGGTGCTGGTCACGGAGACCGGGTGGCCGTCGTACGGGGACCGCAGGG 960
consensus_6688#1      GCGGGCCGGTGCCGGTGCTGGTCACGGAGACCGGGTGGCCGTCGTACGGGGACCGCAGGG 912
                      ************************************************************

consensus_6688#0      CGGAGCCGTACGCCACGCGGGACAACGCCGACGCCTACAACTCCAACCTCATCAAGCACG 1020
consensus_6688#1      CGGAGCCGTACGCCACGCGGGACAACGCCGACGCCTACAACTCCAACCTCATCAAGCACG 972
                      ************************************************************

consensus_6688#0      TCAACGACAAGCCCGGCACGCCGATGCGCCCCGGCGCGCAGGCCAGCGTCTACATCTACG 1080
consensus_6688#1      TCAACGACAAGCCCGGCACGCCGATGCGCCCCGGCGCGCAGGCCAGCGTCTACATCTACG 1032
                      ************************************************************

consensus_6688#0      AGCTCTTCAACGAGGACCTCCGCCCGGGCCCGGTCTCGGAGGCGAACTGGGGACTCTTCC 1140
consensus_6688#1      AGCTCTTCAACGAGGACCTCCGCCCGGGCCCGGTCTCGGAGGCGAACTGGGGACTCTTCC 1092
                      ************************************************************

consensus_6688#0      ACGGCAACGGCACGCCGGTGTACCTGCTCCACGTGTCCGGCGCCGGCGGCTTCCTGGCCA 1200
consensus_6688#1      ACGGCAACGGCACGCCGGTGTACCTGCTCCACGTGTCCGGCGCCGGCGGCTTCCTGGCCA 1152
                      ************************************************************

consensus_6688#0      ACGACACGACGGACCGGACGTTCTGCATCGCGTCCGACGACGCCGACGAGAAGGCGGTGC 1260
consensus_6688#1      ACGACACGACGGACCGGACGTTCTGCATCGCGTCCGACGACGCCGACGAGAAGGCGGTGC 1212
                      ************************************************************

consensus_6688#0      AGGCGGCCATGGACTGGGCGTGCGGCCCCGGGCGCACCGACTGCACGGCGATCCAGCCAG 1320
consensus_6688#1      AGGCGGCCATGGACTGGGCGTGCGGCCCCGGGCGCACCGACTGCACGGCGATCCAGCCAG 1272
                      ************************************************************

consensus_6688#0      GGCAAGGCTGCTACGAGCCCAACGATGTGCGGAGCCACGCCTCCTTCGCATTCGACAGCT 1380
consensus_6688#1      GGCAAGGCTGCTACGAGCCCAACGATGTGCGGAGCCACGCCTCCTTCGCATTCGACAGCT 1332
                      ************************************************************

consensus_6688#0      ACTACCAGTCGCAGGGCAAGGCCGCTGGCTCCTGCTACTTCCAGGGCGTCGGCATGGTCA 1440
consensus_6688#1      ACTACCAGTCGCAGGGCAAGGCCGCTGGCTCCTGCTACTTCCAGGGCGTCGGCATGGTCA 1392
                      ************************************************************

consensus_6688#0      CCACCACTGATCCCAGTCACGATAGCTGCATCTTTCCAGGAAGCAAGCTGTTGAGCAACG 1500
consensus_6688#1      CCACCACTGATCCCAGTGAGTATACCC---CTCCTCAACACTGCCATTTCTTCCTCATTG 1449
                      ***************** *  *** *        ** *    ** *  * **   **  *

consensus_6688#0      TCACCAAATCTGACGGGGCAAACACAACCAC-TGCGCAGACGAGTGATGCAGAGGGCTCT 1559
consensus_6688#1      CTTATGCATTTAGGTTCTTTCTTCTTTTCATGTTTTCAGTTTTAACAGTTTTTGATCTGT 1509
                             ** *                 **  *   ***       *      *  ** *

consensus_6688#0      GCAAT-ATGGAGGCTAAGAACTGGAAGGG---AGACAGGGTTCTTGTTCATCCTCCGGTG 1615
consensus_6688#1      TCATTCATGTTTGCTTGGAATTGGAAGGATTTAGTAGAAGTGCTTGC------------- 1556
                       ** * ***   ***  *** *******    **     ** ****              

consensus_6688#0      GTTGTTGAGCTTGTCAGTGGTGCTTATCACGACGAATTCAAACTTTTGGACATGACAAGA 1675
consensus_6688#1      ------------------------------------------------------------
                                                                                  

consensus_6688#0      GCATGTAGATTGTAACAAAAATGGAATTTTTGGGATGACACTTTAGAGGAGCAGGCAGGG 1735
consensus_6688#1      ------------------------------------------------------------
                                                                                  

consensus_6688#0      GCTGTATGTTTAGTGATTCTTTATTGTTAGATAAGCGTCAATAAATCATT 1785
consensus_6688#1      --------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)