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Oryza sativa
cluster # 6692 cluster # 6692       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6692#0 length = 1633 sequences # 1  
consensus_6692#1 length = 1001 sequences # 2  
consensus_6692#2 length = 745 sequences # 1  

consensusID : consensus_6692#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1633
fasta sequence
                              [AGCTCACTCCTACCCCGTCCTCATCCAAAATCAACCCCTCATTCGCTTCCCCTTTTCCCAGAGTTCTTGCTCCATCTCAGAGAAACAAAATCGCGCCGCCGCCGGGTGTCGAACACCTGGTGGGCGGGGGTTGCGCCGCCGCCGCAGGGCCTCTCGGCCGGTATGGGTGGCGGGGTGTGTTGAGGAGGTGTCCGCGTTGCTGTTGCTGCTGTTGGAGGGAGCCGGGAGCCGCTACGCGAGGGACGACAAGCGTCGAACACCTGCGACCGTCACCGACCGCCGTCTGCCCCTGTTTCGACCGCACCGTGCCACGCGCCGTCGAACTTCGCCGTTCCGTCACTCCGTGATTCCGAGGGAATTGTTGAGTCGATTGAGGAGCAGGGACAGCAAGACTGCGATCAAGATTTGATAGAAAAGTACTTGCGGCAGTATATACCTGTGCTTGAGTTGAACGACCAAGAGAGGAGCTGGTGCGACTCGACAAGGTCTCCGGTGGCCGCCGAGAACCCCACGGCCGCGTCCTGCGGCAAGCCGGCGGCTCTCAGGTCCACCGCCGCCTCGACGCTGTAGCTCATCCCGTCGAGCGTGCGGAGGGTGACCGCCATCCTCGCTGCGGCGGCGTCGTAACTGTTGAGTTGTGATCCAAATTTATTTGCACACGTGTAAAGATTAACTTCGGACGAAGCGAAGCGGAGACCCGTCGCCGGAGGCTTGGGCCGGAGCGAAGCGTAGGCTGAAGTGGATTGGGTCGTTTCCTAACAGTACCTGACCTCGGCCCGCATGACGCCGGCGAGGAGGCTCAACGTCGGCATCGCGGTGGTGTTCTTGGACGTGACGGTGTTGACGTCGATGCCGACGTGATCGACGGTGCCCTCGGGGTCCCACATCGGGTTGCTGAAGGTGTCGAACTCGACGCCGACGGTCCGCGGCGAGCCGTAGGGGCCGAAGTAGTTGTTGGACAGAAGCCCGAAGAACGCGCCGTCCGAGTGCGGCGGCAGGTTGTCGCGGGGAAGCCCGACGAAGAAGGCCATGCCGTCCGCCGGCTGGTTCGTGGAGTTGCGGCCGATGGCGAAGGAGAAGGCGGTGGTGAAGCTGGTGGTGGTCGTCCTCCCGCCGCCGACGTCGTCGTCCCAGAGCCGCACGAGCTGCCGGTGCGCCACGCGCCCGGCTCTCCAGACGCCCAGGTTCGTGAGGTTGATCCGGTCGCCGGCGTGGGCCGCGTCTCCCATGAACACCAAGTTCTTCGCGGCGTCCGCGGAGAAATCGTAGTCAAAGGAGAGCGCCGCGGCGCGTAGGGTGGTGGTGCAGCAGAAGAGGAGAAGGAGGTGTAGCTGTGAGCTTCGGTGATTGCCGGCCATGGCCATAGCCGATCGGAGCCGAGCTGCCGTGGCGTTGGCTTGCTTTGCGGCTTTGCTGCTGTTATTATCATGGGAAGAATTTCCCGCGTCTTGGGGGAAAAAGAATTTGTGGCAAATGGAATTACACCAGCCTGTACGTGTCGTATAGCGATTGACTAATGGGACGATTGACAAATAGAATTTCGTTGTGCCGTCCTGGTCACGGTCACGCATATATATTGTTACATATTGGTACAATGACGTGTTGTCATTTTTGTTCGTTATTATAACTACAC]

[+] EMBL AK110961             [AGCTCACTCCTACCCCGTCCTCATCCAAAATCAACCCCTCATTCGCTTCCCCTTTTCCCAGAGTTCTTGCTCCATCTCAGAGAAACAAAATCGCGCCGCCGCCGGGTGTCGAACACCTGGTGGGCGGGGGTTGCGCCGCCGCCGCAGGGCCTCTCGGCCGGTATGGGTGGCGGGGTGTGTTGAGGAGGTGTCCGCGTTGCTGTTGCTGCTGTTGGAGGGAGCCGGGAGCCGCTACGCGAGGGACGACAAGCGTCGAACACCTGCGACCGTCACCGACCGCCGTCTGCCCCTGTTTCGACCGCACCGTGCCACGCGCCGTCGAACTTCGCCGTTCCGTCACTCCGTGATTCCGAGGGAATTGTTGAGTCGATTGAGGAGCAGGGACAGCAAGACTGCGATCAAGATTTGATAGAAAAGTACTTGCGGCAGTATATACCTGTGCTTGAGTTGAACGACCAAGAGAGGAGCTGGTGCGACTCGACAAGGTCTCCGGTGGCCGCCGAGAACCCCACGGCCGCGTCCTGCGGCAAGCCGGCGGCTCTCAGGTCCACCGCCGCCTCGACGCTGTAGCTCATCCCGTCGAGCGTGCGGAGGGTGACCGCCATCCTCGCTGCGGCGGCGTCGTAACTGTTGAGTTGTGATCCAAATTTATTTGCACACGTGTAAAGATTAACTTCGGACGAAGCGAAGCGGAGACCCGTCGCCGGAGGCTTGGGCCGGAGCGAAGCGTAGGCTGAAGTGGATTGGGTCGTTTCCTAACAGTACCTGACCTCGGCCCGCATGACGCCGGCGAGGAGGCTCAACGTCGGCATCGCGGTGGTGTTCTTGGACGTGACGGTGTTGACGTCGATGCCGACGTGATCGACGGTGCCCTCGGGGTCCCACATCGGGTTGCTGAAGGTGTCGAACTCGACGCCGACGGTCCGCGGCGAGCCGTAGGGGCCGAAGTAGTTGTTGGACAGAAGCCCGAAGAACGCGCCGTCCGAGTGCGGCGGCAGGTTGTCGCGGGGAAGCCCGACGAAGAAGGCCATGCCGTCCGCCGGCTGGTTCGTGGAGTTGCGGCCGATGGCGAAGGAGAAGGCGGTGGTGAAGCTGGTGGTGGTCGTCCTCCCGCCGCCGACGTCGTCGTCCCAGAGCCGCACGAGCTGCCGGTGCGCCACGCGCCCGGCTCTCCAGACGCCCAGGTTCGTGAGGTTGATCCGGTCGCCGGCGTGGGCCGCGTCTCCCATGAACACCAAGTTCTTCGCGGCGTCCGCGGAGAAATCGTAGTCAAAGGAGAGCGCCGCGGCGCGTAGGGTGGTGGTGCAGCAGAAGAGGAGAAGGAGGTGTAGCTGTGAGCTTCGGTGATTGCCGGCCATGGCCATAGCCGATCGGAGCCGAGCTGCCGTGGCGTTGGCTTGCTTTGCGGCTTTGCTGCTGTTATTATCATGGGAAGAATTTCCCGCGTCTTGGGGGAAAAAGAATTTGTGGCAAATGGAATTACACCAGCCTGTACGTGTCGTATAGCGATTGACTAATGGGACGATTGACAAATAGAATTTCGTTGTGCCGTCCTGGTCACGGTCACGCATATATATTGTTACATATTGGTACAATGACGTGTTGTCATTTTTGTTCGTTATTATAACTACAC]


>consensus_6692#0 AGCTCACTCCTACCCCGTCCTCATCCAAAATCAACCCCTCATTCGCTTCCCCTTTTCCCA GAGTTCTTGCTCCATCTCAGAGAAACAAAATCGCGCCGCCGCCGGGTGTCGAACACCTGG TGGGCGGGGGTTGCGCCGCCGCCGCAGGGCCTCTCGGCCGGTATGGGTGGCGGGGTGTGT TGAGGAGGTGTCCGCGTTGCTGTTGCTGCTGTTGGAGGGAGCCGGGAGCCGCTACGCGAG GGACGACAAGCGTCGAACACCTGCGACCGTCACCGACCGCCGTCTGCCCCTGTTTCGACC GCACCGTGCCACGCGCCGTCGAACTTCGCCGTTCCGTCACTCCGTGATTCCGAGGGAATT GTTGAGTCGATTGAGGAGCAGGGACAGCAAGACTGCGATCAAGATTTGATAGAAAAGTAC TTGCGGCAGTATATACCTGTGCTTGAGTTGAACGACCAAGAGAGGAGCTGGTGCGACTCG ACAAGGTCTCCGGTGGCCGCCGAGAACCCCACGGCCGCGTCCTGCGGCAAGCCGGCGGCT CTCAGGTCCACCGCCGCCTCGACGCTGTAGCTCATCCCGTCGAGCGTGCGGAGGGTGACC GCCATCCTCGCTGCGGCGGCGTCGTAACTGTTGAGTTGTGATCCAAATTTATTTGCACAC GTGTAAAGATTAACTTCGGACGAAGCGAAGCGGAGACCCGTCGCCGGAGGCTTGGGCCGG AGCGAAGCGTAGGCTGAAGTGGATTGGGTCGTTTCCTAACAGTACCTGACCTCGGCCCGC ATGACGCCGGCGAGGAGGCTCAACGTCGGCATCGCGGTGGTGTTCTTGGACGTGACGGTG TTGACGTCGATGCCGACGTGATCGACGGTGCCCTCGGGGTCCCACATCGGGTTGCTGAAG GTGTCGAACTCGACGCCGACGGTCCGCGGCGAGCCGTAGGGGCCGAAGTAGTTGTTGGAC AGAAGCCCGAAGAACGCGCCGTCCGAGTGCGGCGGCAGGTTGTCGCGGGGAAGCCCGACG AAGAAGGCCATGCCGTCCGCCGGCTGGTTCGTGGAGTTGCGGCCGATGGCGAAGGAGAAG GCGGTGGTGAAGCTGGTGGTGGTCGTCCTCCCGCCGCCGACGTCGTCGTCCCAGAGCCGC ACGAGCTGCCGGTGCGCCACGCGCCCGGCTCTCCAGACGCCCAGGTTCGTGAGGTTGATC CGGTCGCCGGCGTGGGCCGCGTCTCCCATGAACACCAAGTTCTTCGCGGCGTCCGCGGAG AAATCGTAGTCAAAGGAGAGCGCCGCGGCGCGTAGGGTGGTGGTGCAGCAGAAGAGGAGA AGGAGGTGTAGCTGTGAGCTTCGGTGATTGCCGGCCATGGCCATAGCCGATCGGAGCCGA GCTGCCGTGGCGTTGGCTTGCTTTGCGGCTTTGCTGCTGTTATTATCATGGGAAGAATTT CCCGCGTCTTGGGGGAAAAAGAATTTGTGGCAAATGGAATTACACCAGCCTGTACGTGTC GTATAGCGATTGACTAATGGGACGATTGACAAATAGAATTTCGTTGTGCCGTCCTGGTCA CGGTCACGCATATATATTGTTACATATTGGTACAATGACGTGTTGTCATTTTTGTTCGTT ATTATAACTACAC



consensusID : consensus_6692#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1001
fasta sequence
                              [CCCTCATCTGTTTCTCTCTTCCCCAAAGCTCTTGCTCCATCTCAGAGGAAAGAAAACACGCCGCCGCCGGGTGTCGAACACCTGGTGGGCGGGGGCCGCGCCGCCGCCGCAGGGCCTCTCGGCCGGTGTGGGTGGCAGGGTGTGTTGAGGAGGTGCCCGCGTTGCTGTTGCTACTGTTGGAAGGAGCCAGGAGCCGCTACGCGAGGGAGGACGAGCGTCAAACACCTGCAAACGTCGCCGACCGTCGTCTGCCCC-TGTTTCGGTTGCACCACGCCGCGCGCCGTCAAACTCCGCCGTTCCGCCACTTCGTCGTAAGCCCTCGCGCCTGTAGTATTGCCTGGACACCTAGAAGCCAGCGGCCCCCTCGATTTGGGGTGTGCGCCGCCGTAACCGTGCCGACTCCGGCCGCCACCGCGCCATGGCCGAGCTCATCATGGAGGGACCTCGTTCCAATACAACCTAGGCTAGATTTTTGCTTCTATATGCTCCATGTGGACCCTAGATGGTTGAATCGTCGTTGGTTACGCTCACATTGGTCCTCATTGTGCCGCCGCCGATTTTGGGATCTCGGCGCCGTCGACCGCCGTCGCGCCGCGCGCCGGACGATCGCCGCGCTTCGCCGCCGCCGGCGGCGGGTCTCTGGTGATGCGCCACCGCTCGCCCCACCGTGCGCCGAGCCGTTCCGGCTCGGGCCGTCGCATCATCACGCGCCGCTCCTCTGCTCCGTCGCGAGCGGAAGGAAGAAGACGACGGGGAGAAAGAAAAGAACGAGAGAGGGAGAGATTATGACATGTGGACCCCACTTCATTAGTGTACAGTAATCCTCAAACTAATGATATTATTGTGAACCTATGACATGTAGGCCCGGATGCTTAGAAATCTAATTAAATTGGTTTTTAAGTAAATGTCTCAATGACATGAGGGTCCCACCAAAGGTTAAAGGTCCGGCTTGACCTCACCAACAGGGGGCCGGACCCACCTGTCAATGACACAGCAGGATT]

[+] EMBL AK107975             [CCCTCATCTGTTTCTCTCTTCCCCAAAGCTCTTGCTCCATCTCAGAGGAAAGAAAACACGCCGCCGCCGGGTGTCGAACACCTGGTGGGCGGGGGCCGCGCCGCCGCCGCAGGGCCTCTCGGCCGGTGTGGGTGGCAGGGTGTGTTGAGGAGGTGCCCGCGTTGCTGTTGCTACTGTTGGAAGGAGCCAGGAGCCGCTACGCGAGGGAGGACGAGCGTCAAACACCTGCAAACGTCGCCGACCGTCGTCTGCCCC TGTTTCGGTTGCACCACGCCGCGCGCCGTCAAACTCCGCCGTTCCGCCACTTCGTCGTAAGCCCTCGCGCCTGTAGTATTGCCTGGACACCTAGAAGCCAGCGGCCCCCTCGATTTGGGGTGTGCGCCGCCGTAACCGTGCCGACTCCGGCCGCCACCGCGCCATGGCCGAGCTCATCATGGAGGGACCTCGTTCCAATACAACCTAGGCTAGATTTTTGCTTCTATATGCTCCATGTGGACCCTAGATGGTTGAATCGTCGTTGGTTACGCTCACATTGGTCCTCATTGTGCCGCCGCCGATTTTGGGATCTCGGCGCCGTCGACCGCCGTCGCGCCGCGCGCCGGACGATCGCCGCGCTTCGCCGCCGCCGGCGGCGGGTCTCTGGTGATGCGCCACCGCTCGCCCCACCGTGCGCCGAGCCGTTCCGGCTCGGGCCGTCGCATCATCACGCGCCGCTCCTCTGCTCCGTCGCGAGCGGAAGGAAGAAGACGACGGGGAGAAAGAAAAGAACGAGAGAGGGAGAGATTATGACATGTGGACCCCACTTCATTAGTGTACAGTAATCCTCAAACTAATGATATTATTGTGAACCTATGACATGTAGGCCCGGATGCTTAGAAATCTAATTAAATTGGTTTTTAAGTAAATGTCTCAATGACATGAGGGTCCCACCAAAGGTTAAAGGTCCGGCTTGACCTCACCAACAGGGGGCCGGACCCACCTGTCAATGACACAGCAGGATT]
[+] EMBL AA752877             [                                                                                                                                                                                                                                                ancgncccCTGCCCCNANTTTCGGTTGCACCACGCCGCGCGCCGTCAAACTCCGCCGTTCCGCCACTTCGTCGTAAGCCCTCGCGCCTGTAGTATTGCCTGGACACCTAGAAGCCAGCGGCCCCCTCGATTTGGGGTGTGCGCCGCCGTAACCGTGCCGACTCCGGCCGCCACCGCGCCATGGCCGAGCTCATCATGGAGGGACCTCGTTCCAATACAACCTAGGCTAGATTTTTGCTTCTATATGCTCCATGTGGACCCTAGATGGTTGAATCGTCGTTGGTTTTTTTNNCNTTGGTCCTCATTGTGCCGCCGCCGATTTTGGGATCTCGGCGCCGTCGACCGCCGTCGCGCCGCGCGCCGGANGATCGCCGCGCTTCGCCGCCGCCGGNGGGGGGTCTCTGGTGATGCGCCACCGCTCGCCCCANCGTGCGCCNANCCGTTCCGGCTCGGGCCGTCNCATCATCANNCGCCGCTCCTCTGCTCCGTCnc                                                                                                                                                                                                                                                                               ]


>consensus_6692#1 CCCTCATCTGTTTCTCTCTTCCCCAAAGCTCTTGCTCCATCTCAGAGGAAAGAAAACACG CCGCCGCCGGGTGTCGAACACCTGGTGGGCGGGGGCCGCGCCGCCGCCGCAGGGCCTCTC GGCCGGTGTGGGTGGCAGGGTGTGTTGAGGAGGTGCCCGCGTTGCTGTTGCTACTGTTGG AAGGAGCCAGGAGCCGCTACGCGAGGGAGGACGAGCGTCAAACACCTGCAAACGTCGCCG ACCGTCGTCTGCCCCTGTTTCGGTTGCACCACGCCGCGCGCCGTCAAACTCCGCCGTTCC GCCACTTCGTCGTAAGCCCTCGCGCCTGTAGTATTGCCTGGACACCTAGAAGCCAGCGGC CCCCTCGATTTGGGGTGTGCGCCGCCGTAACCGTGCCGACTCCGGCCGCCACCGCGCCAT GGCCGAGCTCATCATGGAGGGACCTCGTTCCAATACAACCTAGGCTAGATTTTTGCTTCT ATATGCTCCATGTGGACCCTAGATGGTTGAATCGTCGTTGGTTACGCTCACATTGGTCCT CATTGTGCCGCCGCCGATTTTGGGATCTCGGCGCCGTCGACCGCCGTCGCGCCGCGCGCC GGACGATCGCCGCGCTTCGCCGCCGCCGGCGGCGGGTCTCTGGTGATGCGCCACCGCTCG CCCCACCGTGCGCCGAGCCGTTCCGGCTCGGGCCGTCGCATCATCACGCGCCGCTCCTCT GCTCCGTCGCGAGCGGAAGGAAGAAGACGACGGGGAGAAAGAAAAGAACGAGAGAGGGAG AGATTATGACATGTGGACCCCACTTCATTAGTGTACAGTAATCCTCAAACTAATGATATT ATTGTGAACCTATGACATGTAGGCCCGGATGCTTAGAAATCTAATTAAATTGGTTTTTAA GTAAATGTCTCAATGACATGAGGGTCCCACCAAAGGTTAAAGGTCCGGCTTGACCTCACC AACAGGGGGCCGGACCCACCTGTCAATGACACAGCAGGATT



consensusID : consensus_6692#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 745
fasta sequence
                              [TTGAACCATCAGCTGTACTTGAGTTGAAGGACCAAGAGAGGAGCTGGTGCGACTCGACAAGTTCCCCGGTGGCCGCCGAGAATCCCACGGCCGCGTCCTGCGGCAAGCCGGCGGCTCTCAGGTCCACCGCCGCCTCCACGCCGTAGTTCGACCCGTTGGCCGTCAGGTTGACGACCATCTTCCTCGCGGCGGCGTCGTACCTGATCTCCGCCCGCATGACGCCGGCGAGGGTCAAGGTCGGCAGAGCGGTGAAGTTCTGGGACACAATCTGGTTGACGTCGACGCCGATGTGGTCGATGACGCCGTCCTGTGGATCCCAGGGGTTCCTGCAGGTGTCGAACTCTACGCCGACGGTGCGCGGCGAGGCTTCGCCGGTGTTGGGGATGAGGCCGAGGAACCCTCCGGTCATGTCCGGCGCGAGCGTGTCCGCCGGTGGCCCGACGTAGAACGCCATGCCGTCCGCCTGGTTCGTGGAGTTGCGGCCGATGGCGAAGGAGAAGGCGGTGGTGAAGCTGGTGACCGACCCGCCGGCGCCGTCGTCCCAGAGCCGCACGAGCTGCCGGTGCGCCACGCGCCCGGTGCTCCACGTGCCCAGCCTCGTGAGGTTGATCCGGTCGCCGGCGTAGGAGGCGTTGCCCATGAACACGAGGTTTGCGGCGGCGACGTCCCGCCCCACGGCTGCGAAGTCGTAGTCGAAGGAGAGCGCCGCCGCGGCGCGGAGGGTGGTGCAGCAGAGGAAGAGGTG]

[-] EMBL CB659675             [TTGAACCATCAGCTGTACTTGAGTTGAAGGACCAAGAGAGGAGCTGGTGCGACTCGACAAGTTCCCCGGTGGCCGCCGAGAATCCCACGGCCGCGTCCTGCGGCAAGCCGGCGGCTCTCAGGTCCACCGCCGCCTCCACGCCGTAGTTCGACCCGTTGGCCGTCAGGTTGACGACCATCTTCCTCGCGGCGGCGTCGTACCTGATCTCCGCCCGCATGACGCCGGCGAGGGTCAAGGTCGGCAGAGCGGTGAAGTTCTGGGACACAATCTGGTTGACGTCGACGCCGATGTGGTCGATGACGCCGTCCTGTGGATCCCAGGGGTTCCTGCAGGTGTCGAACTCTACGCCGACGGTGCGCGGCGAGGCTTCGCCGGTGTTGGGGATGAGGCCGAGGAACCCTCCGGTCATGTCCGGCGCGAGCGTGTCCGCCGGTGGCCCGACGTAGAACGCCATGCCGTCCGCCTGGTTCGTGGAGTTGCGGCCGATGGCGAAGGAGAAGGCGGTGGTGAAGCTGGTGACCGACCCGCCGGCGCCGTCGTCCCAGAGCCGCACGAGCTGCCGGTGCGCCACGCGCCCGGTGCTCCACGTGCCCAGCCTCGTGAGGTTGATCCGGTCGCCGGCGTAGGAGGCGTTGCCCATGAACACGAGGTTTGCGGCGGCGACGTCCCGCCCCACGGCTGCGAAGTCGTAGTCGAAGGAGAGCGCCGCCGCGGCGCGGAGGGTGGTGCAGCAGAGGAAGAGGTG]


>consensus_6692#2 TTGAACCATCAGCTGTACTTGAGTTGAAGGACCAAGAGAGGAGCTGGTGCGACTCGACAA GTTCCCCGGTGGCCGCCGAGAATCCCACGGCCGCGTCCTGCGGCAAGCCGGCGGCTCTCA GGTCCACCGCCGCCTCCACGCCGTAGTTCGACCCGTTGGCCGTCAGGTTGACGACCATCT TCCTCGCGGCGGCGTCGTACCTGATCTCCGCCCGCATGACGCCGGCGAGGGTCAAGGTCG GCAGAGCGGTGAAGTTCTGGGACACAATCTGGTTGACGTCGACGCCGATGTGGTCGATGA CGCCGTCCTGTGGATCCCAGGGGTTCCTGCAGGTGTCGAACTCTACGCCGACGGTGCGCG GCGAGGCTTCGCCGGTGTTGGGGATGAGGCCGAGGAACCCTCCGGTCATGTCCGGCGCGA GCGTGTCCGCCGGTGGCCCGACGTAGAACGCCATGCCGTCCGCCTGGTTCGTGGAGTTGC GGCCGATGGCGAAGGAGAAGGCGGTGGTGAAGCTGGTGACCGACCCGCCGGCGCCGTCGT CCCAGAGCCGCACGAGCTGCCGGTGCGCCACGCGCCCGGTGCTCCACGTGCCCAGCCTCG TGAGGTTGATCCGGTCGCCGGCGTAGGAGGCGTTGCCCATGAACACGAGGTTTGCGGCGG CGACGTCCCGCCCCACGGCTGCGAAGTCGTAGTCGAAGGAGAGCGCCGCCGCGGCGCGGA GGGTGGTGCAGCAGAGGAAGAGGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6692#0      AGCTCACTCCTACCCCGTCCTCATCCAAAATCAACCCCTCATTCGCTTCCCCTTTTCCCA 60
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      -----------------------------------CCCTCATCTGTTTCTCTCTTCCCCA 25
                                                                                  

consensus_6692#0      GAGTTCTTGCTCCATCTCAGAGAAACAAAATCGCGCCGCCGCCGGGTGTCGAACACCTGG 120
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      AAGCTCTTGCTCCATCTCAGAGGAAAGAAAACACGCCGCCGCCGGGTGTCGAACACCTGG 85
                                                                                  

consensus_6692#0      TGGGCGGGGGTTGCGCCGCCGCCGCAGGGCCTCTCGGCCGGTATGGGTGGCGGGGTGTGT 180
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      TGGGCGGGGGCCGCGCCGCCGCCGCAGGGCCTCTCGGCCGGTGTGGGTGGCAGGGTGTGT 145
                                                                                  

consensus_6692#0      TGAGGAGGTGTCCGCGTTGCTGTTGCTGCTGTTGGAGGGAGCCGGGAGCCGCTACGCGAG 240
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      TGAGGAGGTGCCCGCGTTGCTGTTGCTACTGTTGGAAGGAGCCAGGAGCCGCTACGCGAG 205
                                                                                  

consensus_6692#0      GGACGACAAGCGTCGAACACCTGCGACCGTCACCGACCGCCGTCTGCCCCTGTTTCGACC 300
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      GGAGGACGAGCGTCAAACACCTGCAAACGTCGCCGACCGTCGTCTGCCCCTGTTTCGGTT 265
                                                                                  

consensus_6692#0      GCACCGTGCCACGCGCCGTCGAACTTCGCCGTTCCGTCACTCCGTGATTCCGAGGGAATT 360
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      GCACCACGCCGCGCGCCGTCAAACTCCGCCGTTCCGCCACTTCGTCGT-------AAGCC 318
                                                                                  

consensus_6692#0      GTTGAGTCGATTGAGGAGCAGGGACAGCAAGACTGCGATCAAGATTTGATAGAAAAGTAC 420
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      CTCGCGCCTGTAGTATTGCCTGGACACCTAGAA--------------------------- 351
                                                                                  

consensus_6692#0      TTGCGGCAGTATATACCTGTGCTTGAGTTGAACGACCAAGAGAGGAGCTGGTGCGACTCG 480
consensus_6692#2      ---TTGAACCAT-CAGCTGTACTTGAGTTGAAGGACCAAGAGAGGAGCTGGTGCGACTCG 56
consensus_6692#1      ----GCCAGCGGCCCCCTCGATTTGGGGTGTGCGCC----GCCGTAACCGTGCCGACTCC 403
                             *        **    *** * **   * *       * * * *   ****** 

consensus_6692#0      ACAAGGTCTCCGGTGGCCGCCGAGAACCCCACGGCCGCGTCCTGCGGCAAGCCGGCGGCT 540
consensus_6692#2      ACAAGTTCCCCGGTGGCCGCCGAGAATCCCACGGCCGCGTCCTGCGGCAAGCCGGCGGCT 116
consensus_6692#1      GGCCGCCACCGCGCCATGGCCGAGCTCATCATGGAGGGACCTCGTTCCAATACAAC---- 459
                          *    *  *     ******     ** **  *   *  *   ***  *  *    

consensus_6692#0      CTCAGGTCCACCGCCGCCTCGACGCTGTAGCTCATCCCGTCGAGCGTGCGGAGGGTGACC 600
consensus_6692#2      CTCAGGTCCACCGCCGCCTCCACGCCGTAGTTCGACCCGTTGGCCGTC---AGGTTGACG 173
consensus_6692#1      CTAGGCTAGATTTTTGCTTCTATAT----GCTC--CATGTGGACCCTA-----GATGGTT 508
                      **  * *  *     ** ** *       * **  *  ** *  * *      * **   

consensus_6692#0      GCCATCCTCGCTGCGGCGGCGTCGTAACTGTTGAGTTGTGATCCAAATTTATTTGCACAC 660
consensus_6692#2      ACCATCTTCCTCGCGGCGGCGTCGTA---------------------------------- 199
consensus_6692#1      GA-ATCGTCGTTG-------GTTACG---------------------------------- 526
                         *** **   *       **                                      

consensus_6692#0      GTGTAAAGATTAACTTCGGACGAAGCGAAGCGGAGACCCGTCGCCGGAGGCTTGGGCCGG 720
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      ------------------------------------------------------------
                                                                                  

consensus_6692#0      AGCGAAGCGTAGGCTGAAGTGGATTGGGTCGTTTCCTAACAGTACCTGACCTCGGCCCGC 780
consensus_6692#2      --------------------------------------------CCTGATCTCCGCCCGC 215
consensus_6692#1      ---------------------------------------------CTCACATTGGTCCTC 541
                                                                   ** *  *  * ** *

consensus_6692#0      ATGACGCCGGCGAGGAGGCTCAACGTCGGCATCGCGGTGGTGTTCTTGGACGTGACGGTG 840
consensus_6692#2      ATGACGCCGGCGAGGG---TCAAGGTCGGCAGAGCGGTGAAGTTCTGGGACACAATCTGG 272
consensus_6692#1      ATTGTGCCGCCG-------CCGATTTTGGGATCTCGGCGCCGTCGACCGCCGTCGCGCCG 594
                      **   **** **        * *  * ** *   *** *  **     * *        *

consensus_6692#0      TTGACGTCGATGCCGACGTGATCGACGGTGCCCTCGGGGTCCCACATCGGGTTGCTGAAG 900
consensus_6692#2      TTGACGTCGACGCCGATGTGGTCGATGACGCCGTCCTGTGGATCCCAGGGGTTCCTGCAG 332
consensus_6692#1      C--------GCGCCGG-ACGATCGCCGCGCTTCGCCGCCGCCGGCGGCGGGTCTCTGGTG 645
                                 ****    * ***  *       *         *   ****  ***  *

consensus_6692#0      GTGTCGAACTCGACGCCGACGGTCCGCGGCGAGCCGTAGGGGCCGAAGTAGTTGTTGGAC 960
consensus_6692#2      GTGTCGAACTCTACGCCGACGGTGCGCGGCGAGGCTTCG---CCGG------TGTTGGGG 383
consensus_6692#1      ATGCGCCACCGCTCGCCC-CACCGTGCGCCGAGCCGTT----CCGG-------CTCGGGC 693
                       **    **    ****  *     *** **** * *     ***         * **  

consensus_6692#0      AGAAGCCCGAAGAACGCGCCGTCCGAGTGCGGCGGCAGGTTGTCGCGGGGAAGCCCGACG 1020
consensus_6692#2      ATGAGGCCGAGGAACCCTCCGGTCATGTCCGGCGCGAGCGTGTCCGCCGGTGGCCCGACG 443
consensus_6692#1      CGTCGCATCATCA-CGCGCCGCTCCTCTGCTCCGTCGCGAGCGGAAGGAAGAAGACGACG 752
                          *    *  * * * ***  *   * *  **                     *****

consensus_6692#0      AAGAAGGCCATGCCGTCCGCCGGCTGGTTCGTGGAGTTGCGGCCGATGGCGAAGGAGAAG 1080
consensus_6692#2      TAGAACGCCATGCCGTCCGCC---TGGTTCGTGGAGTTGCGGCCGATGGCGAAGGAGAAG 500
consensus_6692#1      GGGAGAAAGAAAAGAACGAG-----AGAGGGAGAGATTATGACATGTGG---ACCCCACT 804
                        **     *      *         *   * *   **  * *   ***   *    *  

consensus_6692#0      GCGGTGGTGAAGCTGGTGGTGGTCGTCCTCCCGCCGCCGACGTCGTCGTCCCAGAGCCGC 1140
consensus_6692#2      GCGGTGGTGAAGCTGGTGACCGAC---------CCGCCGGCGCCGTCGTCCCAGAGCCGC 551
consensus_6692#1      TCATTAGTGTA--CAGTAATCCTCAA------ACTAATGATATTATTGT----GAACC-T 851
                       *  * *** *    **      *         *    *      * **    ** **  

consensus_6692#0      ACGAGCTGCCGGTGCGCCACGCGCCCGGCTCTCCAGACGCCCAGGTTCGTGAGGTTGATC 1200
consensus_6692#2      ACGAGCTGCCGGTGCGCCACGCGCCCGGTGCTCCACGTGCCCAGCCTCGTGAGGTTGATC 611
consensus_6692#1      ATGACATGTAGGC---CCGGATGCTTAGAAATCTAATTAAATTGGTTTTTAAG--TAAAT 906
                      * **  **  **    **    **   *   ** *        *  *  * **  * *  

consensus_6692#0      CGGTCGCCGGCGTGGGCCGCGTCTCCCATGAACACCAAGTTCTTCGCGGCG--------- 1251
consensus_6692#2      CGGTCGCCGGCGTAGGAGGCGTTGCCCATGAACACGAGGTTTGCGGCGGCGACGTCCCGC 671
consensus_6692#1      GTCTCAATGACATGAG--GGTCCCACCAAAGGTTAAAGGTCCGGCTTGAC---------- 954
                         **   * * *  *  *      ***        * **       * *          

consensus_6692#0      TCCGCGGA---GAAATCGTAGTCAAAGGAGAGCGCCGCGGCGCGTAGGGTGGTGGTGCAG 1308
consensus_6692#2      CCCACGGCTGCGAAGTCGTAGTCGAAGGAGAGCGCCGCCGCGGCGCGGAGGGTGGTGCAG 731
consensus_6692#1      CTCACCAACAGGGGGCCGGACCCACCTGTCAATGACACAGCAGGATT------------- 1001
                        * *      *    ** *  *    *  *  * * * **                   

consensus_6692#0      CAGAAGAGGAGAAGGAGGTGTAGCTGTGAGCTTCGGTGATTGCCGGCCATGGCCATAGCC 1368
consensus_6692#2      CAGAGGAAGAGGTG---------------------------------------------- 745
consensus_6692#1      ------------------------------------------------------------
                                                                                  

consensus_6692#0      GATCGGAGCCGAGCTGCCGTGGCGTTGGCTTGCTTTGCGGCTTTGCTGCTGTTATTATCA 1428
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      ------------------------------------------------------------
                                                                                  

consensus_6692#0      TGGGAAGAATTTCCCGCGTCTTGGGGGAAAAAGAATTTGTGGCAAATGGAATTACACCAG 1488
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      ------------------------------------------------------------
                                                                                  

consensus_6692#0      CCTGTACGTGTCGTATAGCGATTGACTAATGGGACGATTGACAAATAGAATTTCGTTGTG 1548
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      ------------------------------------------------------------
                                                                                  

consensus_6692#0      CCGTCCTGGTCACGGTCACGCATATATATTGTTACATATTGGTACAATGACGTGTTGTCA 1608
consensus_6692#2      ------------------------------------------------------------
consensus_6692#1      ------------------------------------------------------------
                                                                                  

consensus_6692#0      TTTTTGTTCGTTATTATAACTACAC 1633
consensus_6692#2      -------------------------
consensus_6692#1      -------------------------
                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)