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Oryza sativa
cluster # 6725 cluster # 6725       Sequences # 4       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6725#0 length = 1773 sequences # 1  
consensus_6725#1 length = 841 sequences # 1  
consensus_6725#2 length = 763 sequences # 1  
consensus_6725#3 length = 230 sequences # 1  

consensusID : consensus_6725#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1773
fasta sequence
                              [CACGTACATACACCGACAGCCATGGACACCCCGGCGTTGCTCCCGTTGGCGCTTGCCCTTGTTGCCATCCCGATCACCATCCTTCTTGATCTTCAATCGGATCCGCCTCGGCAGGCTGTCCCCCGGGCCCCGGGCGTGGCCGGTGGTAACCTGTTCGACATCACGCTGGTGCGGTGCCGGTGCTTCATGGAGTGGGCAGGCAAGTACGGACCCATCATGACGGTCTGGCTGGGCACGTCGCCGACGATCGTGGTGTCGACGTCGGAGCTAGCCAGAGAGGTGTTCAAGAACGTACAATGATCAGCAGCTCGCCGACCGCCCGCGGAACCACTCGGCGGAGCGGTTAAGCCGCGGCGGCACGGACCTCATCTGGGCGGACTATGGCCCGCACTACGTCAAGGTGCGGAAGCTGTGCAACCTGGAGCTCTTTGCGCCGCGTCGGATGGAGGCTCTCAGGCCCATCAGCGAGGACGAGGTCAATGCCATGGTAGAGTCCATCTACAGAGCCGTCACTGCTCCTGTTTCCTTATACTGAAGGTGAAGAAGGGAAGCCCATCGGGGTGCGGAAGCATCTGTCAATGGTCGCCTTTAATAACATCACGCGGCTGACCTTTGGGAAGCGGTTCATAGTTGCCGCTGGCGAGCTGGACGAGCAAGGGTGCGAACAGAAGGCGATTGTGAAAGCCGGGATCAAGATCGGCGCGTCGCTGCCCATCGCGGAGCACATCCTGGTGCTGCGGTGGCTGAACCTGGTGGATGAGGAGCTCTACAACGCCCACAGCGCAAGGCGAGACCGCTTCACCAGGCGGATCATGGACGAGCACGCCCGCGAGCTCGAGCGGCACGGCGCCAAGCAGCACTTCGTTCACCCTCAGGGACCAGTACGACCTCAGCGACGACACCGTACGTCATCGGCCTCCTCTGGGACATGATCGCTGCCGGCTCGGACACGGCGGTGATAACGGCGGAGTGGGCGATGGCAGAGCTGGTGAGGAATCCAAGGGTGCAGATGAAGGCACAAGAGGAGCTGGACCGCGTCATCGGCCGTGGTCGCGTCATGTTGGAGGCAGACATCCCGAACTTGCCCTACTTGCAGGCCGTCGTGAAGGAGTCGTTCCGGCTGCACACACCGACGCCGCTGATGCTCCCACACAAGGCCAGCGCCGCGTCAAGATCGCCGGCTACGATGTCCCCAAGGGCGCCAATGTCATCGTCAATGTGTGGGCCGTAGGACGCGACCTCAGTGTCTGGGACAGCCCACTGCCCCACTCGAGTACCGGCCGGAGCGTTTCCTCGAGGAGAGCATCGACATCAAGGGCAGCGACTACCGCGTCCTCCCCTTCGGCGCTGGCCGTCGGGTTTGCCCCGGCGCACAGCTCGGGATCAGCCTCGTGGCATCCATGATCGGCCACCTGCTGCACCAGTTCACATGGGCGCTGCCAGACGGCACATGGCCGGAGGACCTCGACATGATGGAGTCCTCAGGGCTCGTCACCTTCATGGCCACGCCGTTGCAGGTTGTTGCCATGCCACGCCTCGACAAGGAGGAGCTGTTCAAGCGAGTGCCAGTCGACATGTCCTGATCGACCTGCCGTTCATTCCAAATACAAGGGGCAGACCAAGGTCCTGGATAAACCTAGGTCCGCCTAGCATATGAATCGACATCCAAGGACATTTTTAATGTTTTGTTGGGCATGGTAGCACGCCAGCACTTACCTTATGCTCGCCAGCACTCACCCTCTGTTTTAAAGGTGTCACCTGCTAATCCATCTA]

[+] EMBL AK068170             [CACGTACATACACCGACAGCCATGGACACCCCGGCGTTGCTCCCGTTGGCGCTTGCCCTTGTTGCCATCCCGATCACCATCCTTCTTGATCTTCAATCGGATCCGCCTCGGCAGGCTGTCCCCCGGGCCCCGGGCGTGGCCGGTGGTAACCTGTTCGACATCACGCTGGTGCGGTGCCGGTGCTTCATGGAGTGGGCAGGCAAGTACGGACCCATCATGACGGTCTGGCTGGGCACGTCGCCGACGATCGTGGTGTCGACGTCGGAGCTAGCCAGAGAGGTGTTCAAGAACGTACAATGATCAGCAGCTCGCCGACCGCCCGCGGAACCACTCGGCGGAGCGGTTAAGCCGCGGCGGCACGGACCTCATCTGGGCGGACTATGGCCCGCACTACGTCAAGGTGCGGAAGCTGTGCAACCTGGAGCTCTTTGCGCCGCGTCGGATGGAGGCTCTCAGGCCCATCAGCGAGGACGAGGTCAATGCCATGGTAGAGTCCATCTACAGAGCCGTCACTGCTCCTGTTTCCTTATACTGAAGGTGAAGAAGGGAAGCCCATCGGGGTGCGGAAGCATCTGTCAATGGTCGCCTTTAATAACATCACGCGGCTGACCTTTGGGAAGCGGTTCATAGTTGCCGCTGGCGAGCTGGACGAGCAAGGGTGCGAACAGAAGGCGATTGTGAAAGCCGGGATCAAGATCGGCGCGTCGCTGCCCATCGCGGAGCACATCCTGGTGCTGCGGTGGCTGAACCTGGTGGATGAGGAGCTCTACAACGCCCACAGCGCAAGGCGAGACCGCTTCACCAGGCGGATCATGGACGAGCACGCCCGCGAGCTCGAGCGGCACGGCGCCAAGCAGCACTTCGTTCACCCTCAGGGACCAGTACGACCTCAGCGACGACACCGTACGTCATCGGCCTCCTCTGGGACATGATCGCTGCCGGCTCGGACACGGCGGTGATAACGGCGGAGTGGGCGATGGCAGAGCTGGTGAGGAATCCAAGGGTGCAGATGAAGGCACAAGAGGAGCTGGACCGCGTCATCGGCCGTGGTCGCGTCATGTTGGAGGCAGACATCCCGAACTTGCCCTACTTGCAGGCCGTCGTGAAGGAGTCGTTCCGGCTGCACACACCGACGCCGCTGATGCTCCCACACAAGGCCAGCGCCGCGTCAAGATCGCCGGCTACGATGTCCCCAAGGGCGCCAATGTCATCGTCAATGTGTGGGCCGTAGGACGCGACCTCAGTGTCTGGGACAGCCCACTGCCCCACTCGAGTACCGGCCGGAGCGTTTCCTCGAGGAGAGCATCGACATCAAGGGCAGCGACTACCGCGTCCTCCCCTTCGGCGCTGGCCGTCGGGTTTGCCCCGGCGCACAGCTCGGGATCAGCCTCGTGGCATCCATGATCGGCCACCTGCTGCACCAGTTCACATGGGCGCTGCCAGACGGCACATGGCCGGAGGACCTCGACATGATGGAGTCCTCAGGGCTCGTCACCTTCATGGCCACGCCGTTGCAGGTTGTTGCCATGCCACGCCTCGACAAGGAGGAGCTGTTCAAGCGAGTGCCAGTCGACATGTCCTGATCGACCTGCCGTTCATTCCAAATACAAGGGGCAGACCAAGGTCCTGGATAAACCTAGGTCCGCCTAGCATATGAATCGACATCCAAGGACATTTTTAATGTTTTGTTGGGCATGGTAGCACGCCAGCACTTACCTTATGCTCGCCAGCACTCACCCTCTGTTTTAAAGGTGTCACCTGCTAATCCATCTA]


>consensus_6725#0 CACGTACATACACCGACAGCCATGGACACCCCGGCGTTGCTCCCGTTGGCGCTTGCCCTT GTTGCCATCCCGATCACCATCCTTCTTGATCTTCAATCGGATCCGCCTCGGCAGGCTGTC CCCCGGGCCCCGGGCGTGGCCGGTGGTAACCTGTTCGACATCACGCTGGTGCGGTGCCGG TGCTTCATGGAGTGGGCAGGCAAGTACGGACCCATCATGACGGTCTGGCTGGGCACGTCG CCGACGATCGTGGTGTCGACGTCGGAGCTAGCCAGAGAGGTGTTCAAGAACGTACAATGA TCAGCAGCTCGCCGACCGCCCGCGGAACCACTCGGCGGAGCGGTTAAGCCGCGGCGGCAC GGACCTCATCTGGGCGGACTATGGCCCGCACTACGTCAAGGTGCGGAAGCTGTGCAACCT GGAGCTCTTTGCGCCGCGTCGGATGGAGGCTCTCAGGCCCATCAGCGAGGACGAGGTCAA TGCCATGGTAGAGTCCATCTACAGAGCCGTCACTGCTCCTGTTTCCTTATACTGAAGGTG AAGAAGGGAAGCCCATCGGGGTGCGGAAGCATCTGTCAATGGTCGCCTTTAATAACATCA CGCGGCTGACCTTTGGGAAGCGGTTCATAGTTGCCGCTGGCGAGCTGGACGAGCAAGGGT GCGAACAGAAGGCGATTGTGAAAGCCGGGATCAAGATCGGCGCGTCGCTGCCCATCGCGG AGCACATCCTGGTGCTGCGGTGGCTGAACCTGGTGGATGAGGAGCTCTACAACGCCCACA GCGCAAGGCGAGACCGCTTCACCAGGCGGATCATGGACGAGCACGCCCGCGAGCTCGAGC GGCACGGCGCCAAGCAGCACTTCGTTCACCCTCAGGGACCAGTACGACCTCAGCGACGAC ACCGTACGTCATCGGCCTCCTCTGGGACATGATCGCTGCCGGCTCGGACACGGCGGTGAT AACGGCGGAGTGGGCGATGGCAGAGCTGGTGAGGAATCCAAGGGTGCAGATGAAGGCACA AGAGGAGCTGGACCGCGTCATCGGCCGTGGTCGCGTCATGTTGGAGGCAGACATCCCGAA CTTGCCCTACTTGCAGGCCGTCGTGAAGGAGTCGTTCCGGCTGCACACACCGACGCCGCT GATGCTCCCACACAAGGCCAGCGCCGCGTCAAGATCGCCGGCTACGATGTCCCCAAGGGC GCCAATGTCATCGTCAATGTGTGGGCCGTAGGACGCGACCTCAGTGTCTGGGACAGCCCA CTGCCCCACTCGAGTACCGGCCGGAGCGTTTCCTCGAGGAGAGCATCGACATCAAGGGCA GCGACTACCGCGTCCTCCCCTTCGGCGCTGGCCGTCGGGTTTGCCCCGGCGCACAGCTCG GGATCAGCCTCGTGGCATCCATGATCGGCCACCTGCTGCACCAGTTCACATGGGCGCTGC CAGACGGCACATGGCCGGAGGACCTCGACATGATGGAGTCCTCAGGGCTCGTCACCTTCA TGGCCACGCCGTTGCAGGTTGTTGCCATGCCACGCCTCGACAAGGAGGAGCTGTTCAAGC GAGTGCCAGTCGACATGTCCTGATCGACCTGCCGTTCATTCCAAATACAAGGGGCAGACC AAGGTCCTGGATAAACCTAGGTCCGCCTAGCATATGAATCGACATCCAAGGACATTTTTA ATGTTTTGTTGGGCATGGTAGCACGCCAGCACTTACCTTATGCTCGCCAGCACTCACCCT CTGTTTTAAAGGTGTCACCTGCTAATCCATCTA



consensusID : consensus_6725#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 841
fasta sequence
                              [ATAGTTATTAGGAAAAAGTCAAAGCTACGTATAATATGAAATGAAAGGGAGTATGGAATAATAAAACGTACTGTTTTAGTTTCCTTATACTGAAGGTGAAGAAGGGAAGCCCATCGGGGTGCGGAAGCATCTGTCAATGGTCGCCTTTAATAACATCACGCGGCTGACCTTTGGGAAGCGGTTCATAGTTGCCGCTGGCGAGCTGGACGAGCAAGGGTGCGAACAGAAGGCGATTGTGAAAGCCGGGATCAAGATCGGCGCGTCGCTGCCCATCGCGGAGCACATCCTGGTGCTGCGGTGGCTGAACCTGGTGGATGAGGAGCTCTACAACGCCCACAGCGCAAGGCGAGACCGCTTCACCAGGCGGATCATGGACGAGCACGCCCGCGAGCTCGAGCGGCACGGCGCCAAGCAGCACTTCGTTCACCCTCAGGGACCAGTACGACCTCAGCGACGACACCGTACGTCATCGGCCTCCTCTGGGACATGATCGCTGCCGGCTCGGACACGGCGGTGATAACGGCGGAGTGGGCGATGGCGGAGCTGGTGAGGAATCCAAGGGTGCAGATGAAGGCACAAGAGGAGCTGGACCGCGTCATCGGCCGTGGTCGCGTCATGTTGGAGGCAGACATCCCGAACTTGCCCTACTTGCAGGCCGTCGTGAAGGAGTCGTTCCGGCTGCACACACCGACGCCGCTGATGCTCCCACACAAGGCCAGCGCCGCGTCAAGATCGCCGGCTACGATGTCCCCAAGGGCGCCAATGTCATCGTCAATGTGTGGGCCGTAGGACGCGACCTCAGTGTCTGGGACAGCCCACTGCCCCACTCGAGTACCGACGG]

[-] EMBL CB671869             [ATAGTTATTAGGAAAAAGTCAAAGCTACGTATAATATGAAATGAAAGGGAGTATGGAATAATAAAACGTACTGTTTTAGTTTCCTTATACTGAAGGTGAAGAAGGGAAGCCCATCGGGGTGCGGAAGCATCTGTCAATGGTCGCCTTTAATAACATCACGCGGCTGACCTTTGGGAAGCGGTTCATAGTTGCCGCTGGCGAGCTGGACGAGCAAGGGTGCGAACAGAAGGCGATTGTGAAAGCCGGGATCAAGATCGGCGCGTCGCTGCCCATCGCGGAGCACATCCTGGTGCTGCGGTGGCTGAACCTGGTGGATGAGGAGCTCTACAACGCCCACAGCGCAAGGCGAGACCGCTTCACCAGGCGGATCATGGACGAGCACGCCCGCGAGCTCGAGCGGCACGGCGCCAAGCAGCACTTCGTTCACCCTCAGGGACCAGTACGACCTCAGCGACGACACCGTACGTCATCGGCCTCCTCTGGGACATGATCGCTGCCGGCTCGGACACGGCGGTGATAACGGCGGAGTGGGCGATGGCGGAGCTGGTGAGGAATCCAAGGGTGCAGATGAAGGCACAAGAGGAGCTGGACCGCGTCATCGGCCGTGGTCGCGTCATGTTGGAGGCAGACATCCCGAACTTGCCCTACTTGCAGGCCGTCGTGAAGGAGTCGTTCCGGCTGCACACACCGACGCCGCTGATGCTCCCACACAAGGCCAGCGCCGCGTCAAGATCGCCGGCTACGATGTCCCCAAGGGCGCCAATGTCATCGTCAATGTGTGGGCCGTAGGACGCGACCTCAGTGTCTGGGACAGCCCACTGCCCCACTCGAGTACCGACGG]


>consensus_6725#1 ATAGTTATTAGGAAAAAGTCAAAGCTACGTATAATATGAAATGAAAGGGAGTATGGAATA ATAAAACGTACTGTTTTAGTTTCCTTATACTGAAGGTGAAGAAGGGAAGCCCATCGGGGT GCGGAAGCATCTGTCAATGGTCGCCTTTAATAACATCACGCGGCTGACCTTTGGGAAGCG GTTCATAGTTGCCGCTGGCGAGCTGGACGAGCAAGGGTGCGAACAGAAGGCGATTGTGAA AGCCGGGATCAAGATCGGCGCGTCGCTGCCCATCGCGGAGCACATCCTGGTGCTGCGGTG GCTGAACCTGGTGGATGAGGAGCTCTACAACGCCCACAGCGCAAGGCGAGACCGCTTCAC CAGGCGGATCATGGACGAGCACGCCCGCGAGCTCGAGCGGCACGGCGCCAAGCAGCACTT CGTTCACCCTCAGGGACCAGTACGACCTCAGCGACGACACCGTACGTCATCGGCCTCCTC TGGGACATGATCGCTGCCGGCTCGGACACGGCGGTGATAACGGCGGAGTGGGCGATGGCG GAGCTGGTGAGGAATCCAAGGGTGCAGATGAAGGCACAAGAGGAGCTGGACCGCGTCATC GGCCGTGGTCGCGTCATGTTGGAGGCAGACATCCCGAACTTGCCCTACTTGCAGGCCGTC GTGAAGGAGTCGTTCCGGCTGCACACACCGACGCCGCTGATGCTCCCACACAAGGCCAGC GCCGCGTCAAGATCGCCGGCTACGATGTCCCCAAGGGCGCCAATGTCATCGTCAATGTGT GGGCCGTAGGACGCGACCTCAGTGTCTGGGACAGCCCACTGCCCCACTCGAGTACCGACG G



consensusID : consensus_6725#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 763
fasta sequence
                              [ACAGCCATGGACACCCCGGCGTTGCTCCCGTTGGCGCTTGCCCTTGTTGCCATCCCGATCACCATCCTTCTTGATCTTCAATCGGATCCGCCTCGGCAGGCTGTCCCCCGGGCCCCGGGCGTGGCCGGTGGTAACCTGTTCGACATCACGCTGGTGCGGTGCCGGTGCTTCATGGAGTGGGCAGGCAAGTACGGACCCATCATGACGGTCTGGCTGGGCACGTCGCCGACGATCGTGGTGTCGACGTCGGAGCTAGCCAGAGAGGTGTTCAAGAACGTACAATGATCAGCAGCTCGCCGACCGCCCGCGGAACCACTCGGCGGAGCGGTTAAGCCGCGGCGGCACGGACCTCATCTGGGCGGACTATGGCCCGCACTACGTCAAGGTGCGGAAGCTGTGCAACCTGGAGCTCTTTGCGCCGCGTCGGATGGAGGCTCTCAGGCCCATCAGCGAGGACGAGGTCAATGCCATGGTAGAGTCCATCTACAGAGCCGTCACTGCTCCTGGTGAAGAAGGGAAGCCCATCGGGGTGCGGAAGCATCTGTCAATGGTCGCCTTTAATAACATCACGCGGCTGACCTTTGGGAAGCGGTTCATAGTTGCCGCTGGCGAGCTGGACGAGCAAGGGTGCGAACAGAAGGCGATTGTGAAAGCCGGGATCAAGATCGGCGCGTCGCTGCCCATCGCGGAGCACATCCTGGTGCTGCGGTGGCTGAACCTGGTGGATGAGGAGCTCTACAACGCCCACAGCGCAAGGCGAGAC]

[+] EMBL CB684180             [ACAGCCATGGACACCCCGGCGTTGCTCCCGTTGGCGCTTGCCCTTGTTGCCATCCCGATCACCATCCTTCTTGATCTTCAATCGGATCCGCCTCGGCAGGCTGTCCCCCGGGCCCCGGGCGTGGCCGGTGGTAACCTGTTCGACATCACGCTGGTGCGGTGCCGGTGCTTCATGGAGTGGGCAGGCAAGTACGGACCCATCATGACGGTCTGGCTGGGCACGTCGCCGACGATCGTGGTGTCGACGTCGGAGCTAGCCAGAGAGGTGTTCAAGAACGTACAATGATCAGCAGCTCGCCGACCGCCCGCGGAACCACTCGGCGGAGCGGTTAAGCCGCGGCGGCACGGACCTCATCTGGGCGGACTATGGCCCGCACTACGTCAAGGTGCGGAAGCTGTGCAACCTGGAGCTCTTTGCGCCGCGTCGGATGGAGGCTCTCAGGCCCATCAGCGAGGACGAGGTCAATGCCATGGTAGAGTCCATCTACAGAGCCGTCACTGCTCCTGGTGAAGAAGGGAAGCCCATCGGGGTGCGGAAGCATCTGTCAATGGTCGCCTTTAATAACATCACGCGGCTGACCTTTGGGAAGCGGTTCATAGTTGCCGCTGGCGAGCTGGACGAGCAAGGGTGCGAACAGAAGGCGATTGTGAAAGCCGGGATCAAGATCGGCGCGTCGCTGCCCATCGCGGAGCACATCCTGGTGCTGCGGTGGCTGAACCTGGTGGATGAGGAGCTCTACAACGCCCACAGCGCAAGGCGAGAC]


>consensus_6725#2 ACAGCCATGGACACCCCGGCGTTGCTCCCGTTGGCGCTTGCCCTTGTTGCCATCCCGATC ACCATCCTTCTTGATCTTCAATCGGATCCGCCTCGGCAGGCTGTCCCCCGGGCCCCGGGC GTGGCCGGTGGTAACCTGTTCGACATCACGCTGGTGCGGTGCCGGTGCTTCATGGAGTGG GCAGGCAAGTACGGACCCATCATGACGGTCTGGCTGGGCACGTCGCCGACGATCGTGGTG TCGACGTCGGAGCTAGCCAGAGAGGTGTTCAAGAACGTACAATGATCAGCAGCTCGCCGA CCGCCCGCGGAACCACTCGGCGGAGCGGTTAAGCCGCGGCGGCACGGACCTCATCTGGGC GGACTATGGCCCGCACTACGTCAAGGTGCGGAAGCTGTGCAACCTGGAGCTCTTTGCGCC GCGTCGGATGGAGGCTCTCAGGCCCATCAGCGAGGACGAGGTCAATGCCATGGTAGAGTC CATCTACAGAGCCGTCACTGCTCCTGGTGAAGAAGGGAAGCCCATCGGGGTGCGGAAGCA TCTGTCAATGGTCGCCTTTAATAACATCACGCGGCTGACCTTTGGGAAGCGGTTCATAGT TGCCGCTGGCGAGCTGGACGAGCAAGGGTGCGAACAGAAGGCGATTGTGAAAGCCGGGAT CAAGATCGGCGCGTCGCTGCCCATCGCGGAGCACATCCTGGTGCTGCGGTGGCTGAACCT GGTGGATGAGGAGCTCTACAACGCCCACAGCGCAAGGCGAGAC



consensusID : consensus_6725#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 230
fasta sequence
                              [GGGGTCCGTTCAGCATATGAATCGACATCCAAGGACACTTGTTAATGTTTTGTTGGGCATGGTAGCACGCCAGCACTTACGTTATGCTCGCCAGACAACCTTCAGAGGGAAAAACTATATTGGCCACTATAGGAAATCAGGTAGGTACTCACGCTCTGTTTTAAAGGTGTCACCTGTTAATCCATCTACTTCCTTAGTAACTTTGATCATAAATTTCTTTAAAAAAAAAA]

[+] EMBL BI813653             [GGGGTCCGTTCAGCATATGAATCGACATCCAAGGACACTTGTTAATGTTTTGTTGGGCATGGTAGCACGCCAGCACTTACGTTATGCTCGCCAGACAACCTTCAGAGGGAAAAACTATATTGGCCACTATAGGAAATCAGGTAGGTACTCACGCTCTGTTTTAAAGGTGTCACCTGTTAATCCATCTACTTCCTTAGTAACTTTGATCATAAATTTCTTTAAAAAAAAAA]


>consensus_6725#3 GGGGTCCGTTCAGCATATGAATCGACATCCAAGGACACTTGTTAATGTTTTGTTGGGCAT GGTAGCACGCCAGCACTTACGTTATGCTCGCCAGACAACCTTCAGAGGGAAAAACTATAT TGGCCACTATAGGAAATCAGGTAGGTACTCACGCTCTGTTTTAAAGGTGTCACCTGTTAA TCCATCTACTTCCTTAGTAACTTTGATCATAAATTTCTTTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6725#0      ----------------------CACGTACATACACCGACAGCCATGGACACCCCGGCGTT 38
consensus_6725#2      -------------------------------------ACAGCCATGGACACCCCGGCGTT 23
consensus_6725#1      ATAGTTATTAGGAAAAAGTCAAAGCTACGTATAATATGAAATGAAAGGGAGTATGGAATA 60
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      GC------TCCCGTTGGCGCTTGCCCTTGTTGCCATCCCGATCACCATCCTTCTTGATCT 92
consensus_6725#2      GC------TCCCGTTGGCGCTTGCCCTTGTTGCCATCCCGATCACCATCCTTCTTGATCT 77
consensus_6725#1      ATAAAACGTACTGTTTTAGTTTCCTTATACTGAAGGTGAAGAAGGGAAGCCCATCGGGGT 120
consensus_6725#3      --------------------------------GGGGTCCGTTCAGCATATGAATCGACAT 28
                                                                    *      * *   *

consensus_6725#0      TCAATCGGATCCGCCTCGGCAG-GCTGTCCCCCGGGCCCCGGGCGTGGCCGGTGGTAACC 151
consensus_6725#2      TCAATCGGATCCGCCTCGGCAG-GCTGTCCCCCGGGCCCCGGGCGTGGCCGGTGGTAACC 136
consensus_6725#1      GCGGAAGCATCTGTCAATGGTC-GCCTTTAATAACATCACGCGGCTGACCTTTGGGAAGC 179
consensus_6725#3      CCAAGGACACTTGTTAATGTTTTGTTGGGCATGGTAGCACGCCAGC-ACTTACGTTATGC 87
                       *      *   *     *    *             * **       *    *  *  *

consensus_6725#0      TGTTCGACATCAC-GCTGGTGCGGTGCCGGTGCTTCATGGAGTGGGCAG----GCAAGTA 206
consensus_6725#2      TGTTCGACATCAC-GCTGGTGCGGTGCCGGTGCTTCATGGAGTGGGCAG----GCAAGTA 191
consensus_6725#1      GGTTCATAGTTGCCGCTGGCGAGCTG--GACGAGCAAGGGTGCGAACAGA-AGGCGATTG 236
consensus_6725#3      TCGCCAGACAACCTTCAGAGGGAAAAACTATATTGGCCACTATAGGAAATCAGGTAGGTA 147
                          *       *  * *  *                          *     *    * 

consensus_6725#0      CGGACCC----ATCATGA-CGGTCTGGCTGGGCACGTCGCCGACGA--TCGTGGTGTCGA 259
consensus_6725#2      CGGACCC----ATCATGA-CGGTCTGGCTGGGCACGTCGCCGACGA--TCGTGGTGTCGA 244
consensus_6725#1      TGAAAGCCGGGATCAAGATCGGCGCGTCGCTGCCCATCGCGGAGCACATCCTGGTGCTGC 296
consensus_6725#3      CTCACGCTCTGTTTTAAA--GGTGTCACCTGTTAATCCATCTACTT--CCTTAGTAACTT 203
                         *  *     *    *  **     *         *    *      * * **     

consensus_6725#0      CGT---CGGAGCTAGCCAGAGAGGTGTTCAAGAACGTACAATGATCAG--------CAGC 308
consensus_6725#2      CGT---CGGAGCTAGCCAGAGAGGTGTTCAAGAACGTACAATGATCAG--------CAGC 293
consensus_6725#1      GGTGGCTGAACCTGGTGGATGAGGAGCTCTACAACGCCCACAGCGCAAGGCGAGACCGCT 356
consensus_6725#3      TGATCATAAATTTCTTTAAAAAAAAAA--------------------------------- 230
                       *       *  *        *                                      

consensus_6725#0      TCGCC-GACCGCCCGCGGAACCACTCGGCGGAGCGGTTAAGC--CGCGGCGGCACGGACC 365
consensus_6725#2      TCGCC-GACCGCCCGCGGAACCACTCGGCGGAGCGGTTAAGC--CGCGGCGGCACGGACC 350
consensus_6725#1      TCACCAGGCGGATCATGGACGAGCACGCCCGCGAGCTCGAGCGGCACGGCGCCAAGCAGC 416
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      TCATC-TGGGCGGACTATGGCCCGCACTACGTCAAGGTGCGGAAGCTGTGCAACCTGGAG 424
consensus_6725#2      TCATC-TGGGCGGACTATGGCCCGCACTACGTCAAGGTGCGGAAGCTGTGCAACCTGGAG 409
consensus_6725#1      ACTTCGTTCACCCTCAGGGACCAGTACGACCTCA--GCGACGACACCGTACGTCATCGGC 474
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      CTCTT-TGCGCCGCGTCGGATGGAGGCTCTCAGGCCCATCAGCGAGGACGA-GGTCAATG 482
consensus_6725#2      CTCTT-TGCGCCGCGTCGGATGGAGGCTCTCAGGCCCATCAGCGAGGACGA-GGTCAATG 467
consensus_6725#1      CTCCTCTGGGACATGATCGCTGCCGGCTC--GGACACGGCGGTGATAACGGCGGAGTGGG 532
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      CCATGGTAGAGTCCATCTACAGAGCCGTCACTGCTCCTGTTTCCTTATACTGAAGGTGAA 542
consensus_6725#2      CCATGGTAGAGTCCATCTACAGAGCCGTCACTGCTCCTG----------------GTGAA 511
consensus_6725#1      CGATGGCGGAGCTGGTG-AGGAATCCAAGGGTGCAGATG---------AAGGCACAAGAG 582
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      GAAGGGAAGCCCATCG--GGGTGCGGAAGCATC-TGTCAATGGTCGCCTTTAATAACATC 599
consensus_6725#2      GAAGGGAAGCCCATCG--GGGTGCGGAAGCATC-TGTCAATGGTCGCCTTTAATAACATC 568
consensus_6725#1      GAGCTGGACCGCGTCATCGGCCGTGGTCGCGTCATGTTGGAGGCAGACATCCCGAACTTG 642
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      ACGCG---GCTGACCTTTGGGAAGCGGTTCATAGTTGCCGCTGGCGAGCTGGACGA-GCA 655
consensus_6725#2      ACGCG---GCTGACCTTTGGGAAGCGGTTCATAGTTGCCGCTGGCGAGCTGGACGA-GCA 624
consensus_6725#1      CCCTACTTGCAGGCCGTCGTGAAGGAGTC----GTTCCGGCTGCACACACCGACGCCGCT 698
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      AGGGTGCGAACAGAAGGCGATTG-----TGAAAGCCGG-GATCAAGATCGGCGCGTCGCT 709
consensus_6725#2      AGGGTGCGAACAGAAGGCGATTG-----TGAAAGCCGG-GATCAAGATCGGCGCGTCGCT 678
consensus_6725#1      GATGCTCCCACACAAGGCCAGCGCCGCGTCAAGATCGCCGGCTACGATGTCCCCAAGGGC 758
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      GCCCATCGCGGAGCACATCCTGGTGCTGCGGTGGCTGAACCTGGTGGATGAGGAGCTCTA 769
consensus_6725#2      GCCCATCGCGGAGCACATCCTGGTGCTGCGGTGGCTGAACCTGGTGGATGAGGAGCTCTA 738
consensus_6725#1      GCCAATGTCATCGTCAATGTGTGGGCCGTAGGACGCGACCTCAGTGTCTGGGACAGCCCA 818
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      CAACGCCCACAGCGCAAGGCGAGACCGCTTCACCAGGCGGATCATGGACGAGCACGCCCG 829
consensus_6725#2      CAACGCCCACAGCGCAAGGCGAGAC----------------------------------- 763
consensus_6725#1      CTGCCCCACTCGAGTACCGACGG------------------------------------- 841
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      CGAGCTCGAGCGGCACGGCGCCAAGCAGCACTTCGTTCACCCTCAGGGACCAGTACGACC 889
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      TCAGCGACGACACCGTACGTCATCGGCCTCCTCTGGGACATGATCGCTGCCGGCTCGGAC 949
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      ACGGCGGTGATAACGGCGGAGTGGGCGATGGCAGAGCTGGTGAGGAATCCAAGGGTGCAG 1009
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      ATGAAGGCACAAGAGGAGCTGGACCGCGTCATCGGCCGTGGTCGCGTCATGTTGGAGGCA 1069
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      GACATCCCGAACTTGCCCTACTTGCAGGCCGTCGTGAAGGAGTCGTTCCGGCTGCACACA 1129
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      CCGACGCCGCTGATGCTCCCACACAAGGCCAGCGCCGCGTCAAGATCGCCGGCTACGATG 1189
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      TCCCCAAGGGCGCCAATGTCATCGTCAATGTGTGGGCCGTAGGACGCGACCTCAGTGTCT 1249
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      GGGACAGCCCACTGCCCCACTCGAGTACCGGCCGGAGCGTTTCCTCGAGGAGAGCATCGA 1309
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      CATCAAGGGCAGCGACTACCGCGTCCTCCCCTTCGGCGCTGGCCGTCGGGTTTGCCCCGG 1369
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      CGCACAGCTCGGGATCAGCCTCGTGGCATCCATGATCGGCCACCTGCTGCACCAGTTCAC 1429
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      ATGGGCGCTGCCAGACGGCACATGGCCGGAGGACCTCGACATGATGGAGTCCTCAGGGCT 1489
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      CGTCACCTTCATGGCCACGCCGTTGCAGGTTGTTGCCATGCCACGCCTCGACAAGGAGGA 1549
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      GCTGTTCAAGCGAGTGCCAGTCGACATGTCCTGATCGACCTGCCGTTCATTCCAAATACA 1609
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      AGGGGCAGACCAAGGTCCTGGATAAACCTAGGTCCGCCTAGCATATGAATCGACATCCAA 1669
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      GGACATTTTTAATGTTTTGTTGGGCATGGTAGCACGCCAGCACTTACCTTATGCTCGCCA 1729
consensus_6725#2      ------------------------------------------------------------
consensus_6725#1      ------------------------------------------------------------
consensus_6725#3      ------------------------------------------------------------
                                                                                  

consensus_6725#0      GCACTCACCCTCTGTTTTAAAGGTGTCACCTGCTAATCCATCTA 1773
consensus_6725#2      --------------------------------------------
consensus_6725#1      --------------------------------------------
consensus_6725#3      --------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)