These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6759#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1587 fasta sequence [CCCCACTCTTCCTCTCCCCGTTCTGCATCACCATGTTCGCCGCCATCTGCCGCCGCCGGCTCGCCGCCCTATTCCCCCAAATCCGCGGTGGCGGCGGCGGCGCATATCATGTCCAGTCCAACCCCCAGGCCGCCCTCCTCTTCCACAGCTACTCCTCAACCGCCGTCACCGGCGGCTCCGACCCCGAGCCATGCCCCGACACCGTCTCTTACCTGGTCTCCTGCGGCCTCCCCCCGGCCGTTGCCCGTCACACGGCCGCCAACACCCGCGGCCTCCGGATCCGATCCACCGAGAAGGCGGACGCCGTCCGCACCCTCCTCCGCAGCTACGGCTTCTCCGACGCGGACGTCGCCCGGATTGCCCGCAGCGCCCCGCTGCTCCTCACCGTCGATCCCGACCGCATCATCCGCCCCAAGCTCGAGTTCTTCGCCACGATGGGGTTCCAGCCCAGCAAGCTGTCCACCGCGCCGCTCCTCCTCGCGCGCAGCCTCGAGAAGCACCTCGTCCCCACCATCCAGTTCCTCCGCAGCATCATCGGCAGCGACGACGGGATCCGCCGCGGGTTCTCCCGCATCCCTCGCGCACTCCTGGTCAGCCTGGACAACTGCATGCGCCCCGCGGAGGAAGCCCTCCACAGGCACGGCCTCACCGGACGCGAGGACGTGTCCAAAGTCCTCGTCCTCCAGATGGGCGTGCTCATGCTGTCGCCGGTCCGCATCGGCGAAATCTTCGAGGATCTCAAGGCTATGGGTATGTCCATCACGGACGGCCGCTTTGCCAACTCGTTCCGCGCGATGTGCAGCATGAGGAGGGCGACCTGGCTGCGGAAGGTGGCGCTGTACCGGAGCTTTGGCTTGTCCGAGAGTGAGGTGTTCGAGGCCTTCAAGAAGCAGCCCACGGCACTGCTTGGCGCTGACGAGACCATAAAAAAGAATGCGTCGTTCTTCCGCGACGCGCTAAAGCTTGAAATGCGCGAGGTAATGGTGCATCCTGTTGTTATGGCATATAGCTTTGAGAAGACCATCCTGCCAAGGTGTGCCGTGTTGAGCGTGTTGATGAGAGAGGGGAAGATTAATCCAGATATCCAGTTGCTTCATGCATTGCTTGGCAGTGCCAAGACATTCTCAGGGAGGTATGTAGATAGGTTTGCTGCTGATGTGCCAGACGTTGTTGAAGCATATGAGGGTAAGATCAAATTCAAAGGATTCAAGGGTCAGGGTCAGGGTGTTTAAGTCCACGGAAGCCAAAAGGCTATTCTTCTGGAGCAAAATCACTTCAGGTTGGGTTGTCTGTTTTTCTTTTAGAGCCATTGAGATCAAGGCATATGATTCTAAATTCTAACGCTGTTTCATGGAGCAGCATTACTCTGTTGTTGGACCATGGTTACTTAGTATCATATATTTGTAGTTTAGCAGTTTCCATTTTGAAGTATTCTGGTCTTGGGAAACCTAGATACATGACGTCGTAGTGATACCTTTAAGGCCAATTCCTCTATCATTTTCTGATTTCAAACAATCTCGTAAATTAACTTAATTTGTGATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CB647859 [CCCCACTCTTCCTCTCCCCGTTCTGCATCACCATGTTCGCCGCCATCTGCCGCCGCCGGCTCGCCGCCCTATTCCCCCAAATCCGCGGTGGCGGCGGCGGCGCATATCATGTCCAGTCCAACCCCCAGGCCGCCCTCCTCTTCCACAGCTACTCCTCAACCGCCGTCACCGGCGGCTCCGACCCCGAGCCATGCCCCGACACCGTCTCTTACCTGGTCTCCTGCGGCCTCCCCCCGGCCGTTGCCCGTCACACGGCCGCCAACACCCGCGGCCTCCGGATCCGATCCACCGAGAAGGCGGACGCCGTCCGCACCCTCCTCCGCAGCTACGGCTTCTCCGACGCGGACGTCGCCCGGATTGCCCGCAGCGCCCCGCTGCTCCTCACCGTCGATCCCGACCGCATCATCCGCCCCAAGCTCGAGTTCTTCGCCACGATGGGGTTCCAGCCCAGCAAGCTGTCCACCGCGCCGCTCCTCCTCGCGCGCAGCCTCGAGAAGCACCTCGTCCCCACCATCCAGTTCCTCCGCAGCATCATCGGCAGCGACGACGGGATCCGCCGCGGGTTCTCCCGCATCCCTCGCGCACTCCTGGTCAGCCTGGACAACTGCATGCGCCCCGCGGAGGAAGCCCTCCACAGGCACGGCCTCACCGGACGCGAGGACGTGTCCAAAGTCCTCGTCCTCCAGATGGGCGTGCTCATGCTGTCGCCGGTCCGCATCGGCGAAATCTTCGAGGATCTCAAGGCTATGGGTA ] [+] EMBL AK073042 [ CATGTTCGCCGCCATCTGCCGCCGCCGGCTCGCCGCCCTATTCCCCCAAATCCGCGGTGGCGGCGGCGGCGCATATCATGTCCAGTCCAACCCCCAGGCCGCCCTCCTCTTCCACAGCTACTCCTCAACCGCCGTCACCGGCGGCTCCGACCCCGAGCCATGCCCCGACACCGTCTCTTACCTGGTCTCCTGCGGCCTCCCCCCGGCCGTTGCCCGTCACACGGCCGCCAACACCCGCGGCCTCCGGATCCGATCCACCGAGAAGGCGGACGCCGTCCGCACCCTCCTCCGCAGCTACGGCTTCTCCGACGCGGACGTCGCCCGGATTGCCCGCAGCGCCCCGCTGCTCCTCACCGTCGATCCCGACCGCATCATCCGCCCCAAGCTCGAGTTCTTCGCCACGATGGGGTTCCAGCCCAGCAAGCTGTCCACCGCGCCGCTCCTCCTCGCGCGCAGCCTCGAGAAGCACCTCGTCCCCACCATCCAGTTCCTCCGCAGCATCATCGGCAGCGACGACGGGATCCGCCGCGGGTTCTCCCGCATCCCTCGCGCACTCCTGGTCAGCCTGGACAACTGCATGCGCCCCGCGGTGGAAGCCCTCCACAGGCACGGCCTCACCGGCCGCGAGGACGTGTCCAAAGTCCTCGTCCTCCAGATGGGCGTGCTCATGCTATCGCCGGTCCGCATCGGCGAAATCTTCGAGGATCTCAAGGCTATGGGTATGTCCATCACGGACGGCCGCTTTGCCAACTCGTTCCGCGCGATGTGCAGCATGAGGAGGGCGACCTGGCTGCGGAAGGTGGCGCTGTACCGGAGCTTTGGCTTGTCCGAGAGTGAGGTGTTCGAGGCCTTCAAGAAGCAGCCCACGGCACTGCTTGGCGCTGACGAGACCATAAAAAAGAATGCGTCGTTCTTCCGCGACGCGCTAAAGCTTGAAATGCGCGAGGTAATGGTGCATCCTGTTGTTATGGCATATAGCTTTGAGAAGACCATCCTGCCAAGGTGTGCCGTGTTGAGCGTGTTGATGAGAGAGGGGAAGATTAATCCAGATATCCAGTTGCTTCATGCATTGCTTGGCAGTGCCAAGACATTCTCAGGGAGGTATGTAGATAGGTTTGCTGCTGATGTGCCAGACGTTGTTGAAGCATATGAGGGTAAGATCAAATTCAAAGGATTCAAGGGTCAGGGTCAGGGTGTTTAAGTCCACGGAAGCCAAAAGGCTATTCTTCTGGAGCAAAATCACTTCAGGTTGGGTTGTCTGTTTTTCTTTTAGAGCCATTGAGATCAAGGCATATGATTCTAAATTCTAACGCTGTTTCATGGAGCAGCATTACTCTGTTGTTGGACCATGGTTACTTAGTATCATATATTTGTAGTTTAGCAGTTTCCATTTTGAAGTATTCTGGTCTTGGGAAACCTAGATACATGACGTCGTAGTGATACCTTTAAGGCCAATTCCTCTATCATT ] [-] EMBL CB647860 [ GGAGGGCGACCTGGCTGCGGAAGGTGGCGCTGTACCGGAGCTTTGGTTTGTCCGAGAGTGAGGTGTTCGAGGCCTTCAAGAAGCAGCCCACGGCACTGTTTGGCGCTGACGAGACCATAAAAAAGAATGCGTCGTTTTTCCGCGACGCGCTAAAGCTTGAAATGCGCGAGGTAATGGTGCATCCTGTTGTTATGGCATATAGCTTTGAGAAGACCATCCTGCCAAGGTGTGCCGTGTTGAGCGTGTTGATGAGAGAGGGGAAGATTAATCCAGATATCCAGTTGCTTCATGCATTGCTTGGCAGTGCCAAGACATTTTCAGGGAGGTATGTAGATAGGTTTGCTGCTGATGTGCCAGACGTTGTTGAAGCATATGAGGGTAAGATCAAATTCAAAGGATTCAAGGGTCAGGGTCAGGGTGTTTAAGTCCACGGAAGCCAAAAGGCTATTTTTTTGGAGCAAAATCACTTCAGGTTGGGTTGTCTGTTTTTTTTTTAGAGCCATTGAGATCAAGGCATATGATTCTAAATTCTAACGCTGTTTCATGGAGCAGCATTACTCTGTTGTTGGACCATGGTTACTTAGTATCAAAGATTTGTAGTTTA ] [+] EMBL CB000372 [ TGGCATATAGCTTTGAGAAGACCATCCTGCCACGGTGTGCCGTGTTGAGCGTGTTGATGAGAGAGGGGAAGATTAATCCAGATATCCAGTTGCTTCATGCATTGCTTGGCAGTGCCAAGACATTCTCAGGGAGGTATGTAGATAGGTTTGCTGCTGATGTGCCAGACGTTGTTGAAGCATATGAGGGTAAGATCAAATTCAAAGGATTCAAGGGTCAGGGTCAGGGTGTTTAAGTCCACGGAAGCCAAAAGGCTATTCTTCTGGAGCAAAATCACTTCAGGTTGGGTTGTCTGTTTTTCTTTTAGAGCCATTGAGATCAAGGCATATGATTCTAAATTCTAACGCTGTTTCATGGAGCAGCATTACTCTGTTGTTGGACCATGGTTACTTAGTATCATATATTTGTAGTTTAGCAGTTTCCATTTTGAAGTATTCTGGTCTTGGGAAACCTAGATACATGACGTCGTAGTGATACCTTTAAGGCCAATTCCTCTATCATTTTCTGATTTCAAACAATCTCGTAAATTAACTTAATTTGTGATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||