cluster # 6770

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Oryza sativa
cluster # 6770 cluster # 6770 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6770#0 length = 689 sequences # 4

consensusID : consensus_6770#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 689
fasta sequence

                              [ATCCCCACTCCCTCAGAAACCATCGACGTTACCCCAAAAATCGC-CTCTGCTCCCTCCGCTCCCAGAAATTGACGNCACCAATTTCTTCCCCCTATTCGGATTCCGGTCATGGAGATGCTACTGCCACCACCGATGAACTNCTCCTCCCAGTCGCGGCGAATCAAGCGACCCCGATGAAAAATCGAGCTCCCCGGCGACGGATCGACCTGCCACGATGGCGGATTGAGCGGCCTCACCTCTCCTCACCGGATCCAGCCAGTGTCGTGGCCATCTTCGAGCTCGAGCTGCATGCCTCCGTGCGACAGCGGCGGTGGATCGGACAAGGGTGACGCGGATCTGTCGGCCTCCACCCCAGATGAGCGATTTTCCACTCTACCGGATTGAGTGTATATTTGGCTTTGTCTTTTATCTGACTGGATTTCTCTTCTTTTTCTTCTTAATTAGGATTCAATTGTTCTTACCATAAAGATGTTTTTAGGCCCGATTTGGTTAGGTTTTGGGGGAATTTTGGGTTAAACTCTATCGGTTTTCTATAGGAGAGACGGGGATAGATTCGGTCGGTTTCTTTAGGAGGGACGGACAGAGGAAGTGCGGAGGGCGGAGGGGATCGTGAACAAAGGGGACGCTCCACCAAAATGTCTTAAAAGATCCCTCCATTGTAAGTCATTTTTACCATTTCTAGAGATAAA]

[+] EMBL C73955               [ATCCCCACTCCCTCAGAAACCATCGACGTTACCCCAAAAATCGC CTCTGCTCCCTCCGCTCCCAGAAATTGACGNCACCAATTTCTTCCCCCTATTCGGATTCCGGTCATGGAGATGCTACTGCCACCACCGATGAACTNCTCCTCCCAGTCGCGGCGAATCAAGCGACCCCGATGAAAAATCGAGCTCCCCGGCGACGGATCGACCTGCCACGATGGNGGATTGAGCGGCCTCACCTCTNCTCANCGGATCCAGCCAGTGTCGTGGCCATCTTCGAGCTCGAGCTGCATGCCTCCGTGCGACAG GGCGGTGGATC                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB669772             [                         ACGTTACCCCAAAAATCGCACTCTGCTCCCTCCGCTCCCAGAAATTGACGCCACCAATTTCTTCCCCCTATTCGGATTCCGGTCATGGAGATGCTACTGCCACCACCGATGAACTCCTCCTCCCAGTCGCGGCGAATCAAGCGACCCCGATGAAAAATCTAGCTCCCCGGCGACGGATCCACCTGCCACGATGGCGGATTGAGCGGCCTCACCTCTCCTCACCGGATCCAGCCAGTGTCGTGGCCATCTTCGAGCTCGAGCTGCATGCCTCCGTGCGACAGCGGCGGCGGATCGGACAAGGGTGACGCGGATCTGTCGGCCTCCACCCCAGATGAGCGATTTTCCACTCTACCGGATTGAGTGTATATTTGGCTTTGTCTTTTATCTGACTGGATTTCTCTTCTTTTTCTTCTTAATTAGGATTCCATTGTTCGTACCATAAAGATGTTTTTAGGCCCGATTTGGTTAGGTTTTGGGGGAATTTTGGGTTAAACTCTATCGGTTTTCTATAGGAGAGACGGGGATAGATTCCGTCGGCTTCTTTAGGAGGGACGGACAGAGGAAGTGCGGAGGGCGGAGGGGATCCTGAACAAAGGGGACGCTCCACCGAAATGTCTTAGAAGATCCCTCCATTGTAAGTCATTTTTACCATTTCTAGAGATAAA]
[+] EMBL AU029248             [                                                                                                                                                                ATCAAGCGACCCCGATGAAAAATCGAGNTCCCCGGCGACGGATCGACCTGCCACGATGGCGGATTGAGCGGCCTCACCTCTCCTCACCGGATCCAGCCAGTGTCGTGGCCATCTTCGAGCTCGAGNTGCATGCCTCCGTGCGACAGCGGCGGTGGATCGGACAAGGGTGACGCGGATCTGTCGGCNTCCACCCCAGATGAGCGATTTTCCACTCTACCGGATTGAGTGTATATTTGGCTTTGTCTTTTATCTGACTGGATTTCTCTTCTTTTTCTTCTTAATTAGGATTCAATTGTTCTTACCATAAAGATGTTTTTAGGCCCGATTTGGTTAGGTTTTGGGGGAATTTTGGGTTAAACTCTATCGGTTTTCTATAGGAGAGACGGGGATAGATTCGGTCGGTTTCTTTAGGAGGGACGGACAGAGGAAGTGCGGAGGGCGGAGGGGATCGTGAACAAAGGGGACGCTCCACCAAAATGTCTTAAAAGATCCCTCCATTGTAAGTCATTTTTACCAT             ]
[+] EMBL AU182298             [                                                                                                                                                                                                                                                                             CATCTTCGAGCTCGAGCTGCATGCCTCCGTGCGACAGCGGCGGTGGATCGGACAAGGGTGACGCGGATCTGTCGGCCTCCACCCCAGATGAGCGATTTTCCACTCTACCGGATTGAGTGTATATTTGGCTTTGTCTTTTATCTGACTGGATTTCTCTTCTTTTTCTTCTTAATTAGGATTCAATTGTTCTTACCATAAAGATGTTTTTAGGCCCGATTTGGTTAGGTTTTGGGGGAATTTTGGGTTAAACTCTATCGGTTTTCTATAGGAGAGACGGGGATAGATTCGGTCGGTTTCTTTAGGAGGGACGGACAGAGGAAGTGCGGAGGGCGGAGGGGATCGTGAACAAAGGGGACGCTCCACCAAAATGTCTTAAAAGATCCCTCCATTGTAAGTCATTTTTACCAT             ]




>consensus_6770#0
ATCCCCACTCCCTCAGAAACCATCGACGTTACCCCAAAAATCGCCTCTGCTCCCTCCGCT
CCCAGAAATTGACGNCACCAATTTCTTCCCCCTATTCGGATTCCGGTCATGGAGATGCTA
CTGCCACCACCGATGAACTNCTCCTCCCAGTCGCGGCGAATCAAGCGACCCCGATGAAAA
ATCGAGCTCCCCGGCGACGGATCGACCTGCCACGATGGCGGATTGAGCGGCCTCACCTCT
CCTCACCGGATCCAGCCAGTGTCGTGGCCATCTTCGAGCTCGAGCTGCATGCCTCCGTGC
GACAGCGGCGGTGGATCGGACAAGGGTGACGCGGATCTGTCGGCCTCCACCCCAGATGAG
CGATTTTCCACTCTACCGGATTGAGTGTATATTTGGCTTTGTCTTTTATCTGACTGGATT
TCTCTTCTTTTTCTTCTTAATTAGGATTCAATTGTTCTTACCATAAAGATGTTTTTAGGC
CCGATTTGGTTAGGTTTTGGGGGAATTTTGGGTTAAACTCTATCGGTTTTCTATAGGAGA
GACGGGGATAGATTCGGTCGGTTTCTTTAGGAGGGACGGACAGAGGAAGTGCGGAGGGCG
GAGGGGATCGTGAACAAAGGGGACGCTCCACCAAAATGTCTTAAAAGATCCCTCCATTGT
AAGTCATTTTTACCATTTCTAGAGATAAA

clustalw multiple alignements is not computed in this case