|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6795#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2202 fasta sequence
[CACAGGCTCACACACAGGCACACACACACTTCCCGATGGAGCCCACCGGCACGATCGTCTTCGCCACCGTCGGCGTCACCAACTTCGGCTTCGACGTCTTCTCCGCCGCCGTGCCACTGCCGCCGATGGAGGAGGACGCCGAGCGCCGCCACACGGACGGCGTATCCGTGAACTTCAACGCGCAGTTCGTCGACGATGGCGGGGAGGAGGTGGCGTTCGTGTCGGAGCGAGGCGGCGCGGCGGGGCTGTTCCGGTGCCGGCCGGGGCCCGAGCAGCGGGCCGAGCCGCTGCCGACGGTGGAGGGGAGCCTGTTCCATGACCGCCCGACGGTGAGGGGCGGGAGGTTGTACTTCGTCTCCGCCCACGAGCAGCCGCCGGCGCCGTTCAGGAGCTGGGCGGCGGTGTACGCGACGGAGATTGGGAGCAAGGAGACGGTGCGGGTGAGTCCTCCGGGCGTCGTGGACATGAGCCCCGCCGTGTCGGACTCCGGGGAGCTCGTTGCCGTCGCGTCGTACGGGGATCGGCCGTGGGCGTTCGACTTCCGCGTGCTGGAAACGGAGGTCGCCGTCTTCCGCGCCGCCGATCCAGCCAGGCGCGTCGTCGTGGTGGGGCGCGGTGGGTGGCCGACGTGGCACGGCGAGGGCACGGTCTTCTTCCACCGCGTCGCCGACGACGGGTGGTGGAGCGTGTTCCGGGTGGACGTCTCGCCTGAGACCCTCGAGCCCACCGGCGGCGAGAGGCGAGTGACGCCTCCCGGGCTGCACTGCTTCACTCCCGCCGCGGTCGGCCGCGGCGGCGGCGGGCGGTGGATCGCCGTGGCGACGCGGCGGAAGGGGCGCGCGCAGCGGCACGTCGAGCTGTTCGACCTCGAGACGGAGAGCTTCTCCCCGCTCACCGAGCGCCTCAACCCGGAGCTCCACCACTACAACCCCTTCTTCTCCCCGTCCGGCGACCGCGTCGGGTACCACCGCTTCCGCGGCGCCGGCGCGCGGGGGGACTCGGTGGTGCCCTACCTGCAGCCGGTGCAGAGCCCGGTGAGCTCGCTCCGGATGCTGCGCGTGTACGGCACGTTCCCGTCGTTCTCGCCGGACGCGGCGCACCTCGCCATGAACGGCGACTTCTTCAAGACGCCGGGCGTCACCATCCTCCGATCCGACGGCGCCAAGCGGTGGGTGCTCACGCGGGAGCCCAACCTGTTCTACACGTCGTGGAGCCCCGCCGAGAGCGGGGTCATCTTCACCTCCATGGGCCCCATCTTCGAGACCACCAAAGCGACGGTGAGGATCGCGCGGCTGGAGTTCGACGCCGGCGAGCTCACCACCGGCCGCGACGAGGTCGCGGCCACGCTCAAGGTGCTCACCCGGCCGGAGGCCGGCAACGACGCGTTCCCGGCGGTGTCGCCGTGCGGGAAGTGGGTGGTGTTCCGGTCAGGCCGCTCCGGCCACAAGAACCTCTACATCGTCGACGCGGCGCACGGCGAGGACGTCGGCGCCGGCGAGGGGACGATCCGGCGGCTGACCGACGGCGAGTGGATCGACACGATGCCGAGCTGGTCGCCGGACGGGAGCCTGATCGCGTTTCTCCTCCAACCGCCACGACCCGACGAACGCCGCCGTGTTCAGCATCTACCTGGTCCGGCCAGACGGCTCCGGGCTCCGCCGCGTCCACGTCGCCGGGCCGGCGGGGAGCGCGGCGGCGGACAGGGAGCGGATCAACCACGTGTGCTTCAGCCCGGACTCGCGGTGGCTGCTGTTCACGGCCAA--CTTCG-GC-GGCGTG-A-TGG-CGGAGCCCATCTCGGCGCCGAACCAGTTCCAGCC-GTACGGCGACCTGTACGTGT-GCCGGCTC-GACGGCTCGGGGTTGGTCAGGCTCACCTGCAACGCCTACGAGAACGGCACGCCGGC-GTGGGGCCCGGCGAGCTCGCCGGCGGCGGGG-CTGGAGTCGCTGTCGCTGGTCCCGGGCG-CCGGGGACGAGTCGCTGGGCGAGTTTGATGAGCCGCTCTGGCTCA-CTTGCGACGTCTGAGTTGAGGGCGACAGATGATGATCGATGAGCTGCACTTTTAATTAGAATAAAATCTGTGGTGAATTTGATCGGTTGATAATAACGGGACGAGCCTGATTGTGTGGGCTAGTACGAACCTTGTTGGGAATAGGTTTTTTATGCATGAAAAGGGAATAAATGAATAATGATTCTGGGTAAAAAAAAAAA]
[+] EMBL AK100429 [CACAGGCTCACACACAGGCACACACACACTTCCCGATGGAGCCCACCGGCACGATCGTCTTCGCCACCGTCGGCGTCACCAACTTCGGCTTCGACGTCTTCTCCGCCGCCGTGCCACTGCCGCCGATGGAGGAGGACGCCGAGCGCCGCCACACGGACGGCGTATCCGTGAACTTCAACGCGCAGTTCGTCGACGATGGCGGGGAGGAGGTGGCGTTCGTGTCGGAGCGAGGCGGCGCGGCGGGGCTGTTCCGGTGCCGGCCGGGGCCCGAGCAGCGGGCCGAGCCGCTGCCGACGGTGGAGGGGAGCCTGTTCCATGACCGCCCGACGGTGAGGGGCGGGAGGTTGTACTTCGTCTCCGCCCACGAGCAGCCGCCGGCGCCGTTCAGGAGCTGGGCGGCGGTGTACGCGACGGAGATTGGGAGCAAGGAGACGGTGCGGGTGAGTCCTCCGGGCGTCGTGGACATGAGCCCCGCCGTGTCGGACTCCGGGGAGCTCGTTGCCGTCGCGTCGTACGGGGATCGGCCGTGGGCGTTCGACTTCCGCGTGCTGGAAACGGAGGTCGCCGTCTTCCGCGCCGCCGATCCAGCCAGGCGCGTCGTCGTGGTGGGGCGCGGTGGGTGGCCGACGTGGCACGGCGAGGGCACGGTCTTCTTCCACCGCGTCGCCGACGACGGGTGGTGGAGCGTGTTCCGGGTGGACGTCTCGCCTGAGACCCTCGAGCCCACCGGCGGCGAGAGGCGAGTGACGCCTCCCGGGCTGCACTGCTTCACTCCCGCCGCGGTCGGCCGCGGCGGCGGCGGGCGGTGGATCGCCGTGGCGACGCGGCGGAAGGGGCGCGCGCAGCGGCACGTCGAGCTGTTCGACCTCGAGACGGAGAGCTTCTCCCCGCTCACCGAGCGCCTCAACCCGGAGCTCCACCACTACAACCCCTTCTTCTCCCCGTCCGGCGACCGCGTCGGGTACCACCGCTTCCGCGGCGCCGGCGCGCGGGGGGACTCGGTGGTGCCCTACCTGCAGCCGGTGCAGAGCCCGGTGAGCTCGCTCCGGATGCTGCGCGTGTACGGCACGTTCCCGTCGTTCTCGCCGGACGCGGCGCACCTCGCCATGAACGGCGACTTCTTCAAGACGCCGGGCGTCACCATCCTCCGATCCGACGGCGCCAAGCGGTGGGTGCTCACGCGGGAGCCCAACCTGTTCTACACGTCGTGGAGCCCCGCCGAGAGCGGGGTCATCTTCACCTCCATGGGCCCCATCTTCGAGACCACCAAAGCGACGGTGAGGATCGCGCGGCTGGAGTTCGACGCCGGCGAGCTCACCACCGGCCGCGACGAGGTCGCGGCCACGCTCAAGGTGCTCACCCGGCCGGAGGCCGGCAACGACGCGTTCCCGGCGGTGTCGCCGTGCGGGAAGTGGGTGGTGTTCCGGTCAGGCCGCTCCGGCCACAAGAACCTCTACATCGTCGACGCGGCGCACGGCGAGGACGTCGGCGCCGGCGAGGGGACGATCCGGCGGCTGACCGACGGCGAGTGGATCGACACGATGCCGAGCTGGTCGCCGGACGGGAGCCTGATCGCGTTTCTCCTCCAACCGCCACGACCCGACGAACGCCGCCGTGTTCAGCATCTACCTGGTCCGGCCAGACGGCTCCGGGCTCCGCCGCGTCCACGTCGCCGGGCCGGCGGGGAGCGCGGCGGCGGACAGGGAGCGGATCAACCACGTGTGCTTCAGCCCGGACTCGCGGTGGCTGCTGTTCACGGCCAA CTTCG GC GGCGTG A TGG CGGAGCCCATCTCGGCGCCGAACCAGTTCCAGCC GTACGGCGACCTGTACGTGT GCCGGCTC GACGGCTCGGGGTTGGTCAGGCTCACCTGCAACGCCTACGAGAACGGCACGCCGGC GTGGGGCCCGGCGAGCTCGCCGGCGGCGGGG CTGGAGTCGCTGTCGCTGGGCCCGGGCG CCGGGGACGAGTCGCTGGGCGAGTTTGATGAGCCGCTCTGGCTCA CTTGCGACGTCTGAGCTGAGGGCGACAGATGATGATCGATGAGCTGCACTTTTAATTAGAATAAAATCTGTGGTGAATTTGATCGGTTGATAATAACGGGACGAGCCTGATTGTGTGGGCTAGTACGAACCTTGTTGGGAATAGGTTTTTTATGCATGAAAAGGGAATAAATGAATAAT ]
[+] EMBL BM421744 [ cgcccCGCCCCCCTGTTCACCAT TACCT GTCC GCC ACCGCTCCGGGCTCC CCGCGTCCAC TCGCC GGCC GCGGGGAGC C GC GCGGACAGGGAGCGGATCAACCACGTGTGCTTCAGCCCGGACTCGCGGTGGCTGCTGTTCACGGCCAA CTTCG GC GGCGTG A T G CGGAGCCCATCTCGGCGCCGAACCAGTTCCAGCC GTACGGCGACCTGTACGTGT GCCGGCTC GACGGCTCGGGGTTGGTCAGGCTCACCTGC ACGCCTACGAGAACGGCACGCCGGC GTGGGGCCCGGCGAGCTCGCCGGCGGCGGGG CTGGAGTCGCTGTCGCTGGTCCCGGGCGCCCGGGGACGAGTCGCTGGGCGAGTTTGATGAGCCGCTCTGGCTCA CTTGCGACGTCTGAGTTGAGGGCGACAGATGATGATCGATGAGCTGCACTTTTAATTAGAATAAAATCTGTGGTGAATTTGATCGGTTGATAATAACGGGACGAGCCTGATTGTGTGGGCTAGTACGAACCTTGTTGGGAATAGGTTTTTTATGCATGAAAAGGGAATANATGAATAATGATTCTGGGTAAAAAAAAAA ]
[+] EMBL BM038390 [ acccgcGCGGNCAGGGANCGTATCACCCACGTGTGCTTCAGCCCGGACTC C GTTGCT CTGTTCACGGCCAA CTTC GC GGCGTG A T G CGGAGCCCATCTCGGCCCCGAACCCGTTCCANCC GTACGGCGACCTGTACGTGT CCGGCTC GACGGCTCGGGGTTGGTCAGGCTCACCTGCAACGCCTACGAGAACGGCACGCCGGC GTGGGGCCCGGCGAGCTCGCCGGCGGCGGGGCCTGGAGTCGCTGTCGCTGGTCCCGGGCGCCCGGGGACGAGTCGCTGGGCGAGTTTGATGAGCCGCTCTGGCTCACCTTGCGACGTCTGAGTTGAGGGCGACAGATGATGATCGATGAGCTGCACTTTTAATTAGAATAAAATCTGTGGTGAATTTGATCGGTTGATAATAACGGGACGAGCCTGATTGTGTGGGCTAGTACGAACCTTGTTGGGAATAGGTTTTTTATGCATGAAAAGGGAATAAATGAATAATGATTCTGGGTAAAAAAAAAAA]
[+] EMBL BI812715 [ cGCCAATTTTTCGTGCGGGCTTGTATTGGCCGGAGCCCATTTCGGC CCTGACCAGTTCCAGCCTGT CGG GACCTGTACGTGTGGCCGGCTCGGAC GCTCGGGGTT GTCAGGCTCACCTGCAACGCCTGCGAGGACGGCACGCCGGCTGTGGGGCCCGGCGAGCTCGCCGGCGGCGGGG CTGGAGTCGCTGTCGCTGGTCCCGGGCG CCGGGGACGA TC CTGGGCGAGTTTGATGAGCCGCTCTGGCTCA CTTGCGACGTCTGAGTTGAGGGCGACAGATGATGATCGATGAGCTGCACTTTTAATTAGAATAAAATCTGTGGTGAATTTGATCGGTTGATAATAACGGGACGAGCCTGATTGTGTGGGCTAGTACGAACCTTGTTGGGAATAGGTTTTTTATGCATGAAAAGGGAATAAATGAATAATGATTCTGGGTAAAAAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||