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Oryza sativa
cluster # 6801 cluster # 6801       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6801#0 length = 1260 sequences # 4  

consensusID : consensus_6801#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1260
fasta sequence
                              [GTCTGGAGATCTATCTGAGGTGCTTTGTTCATTCAGCTCCTAGCAAGTGGGCAGCTTGGTTACATCTTGCAGAATATTGGTATAATACCTCATATCACTCTGCTGTCCAGTCTACTCCCTTTGAAGTGCTCTATGGTCATTCCCCTTGTCATTTTGGCATCAGTTTACAAGATTGTGCCATTCCTGATTTACATGTTTGGTTAAAGGAAAGGCAGTTGATGCAGAAGCTTGTTCAACAGCATCTTCACAGAGCACAGCAGCAGATGAAGCATTTTGCTGATAAGAAAAGGAGTTTTCGTACTTTTGCTATTGGAGACTGGGTGTACCTCAAATTACAGCCCTATGTTCAAACTTCTGTGGCTGTCAGAGCTAATCACAAATTGGCTTTCAAATATTTTGGGCCATTTCAAATTACAGCACAGATTGGAACTGTTGCTTATAAATTGCAGTTACCTCCCACCAGTTCTATACACCCAGTTTTTCATGTGTCTCAATTGAAATCTGCTACTGGCTTTACAGGACATGTTCAGTCTCATCTGCCATCGTCTATCTCTGCCTTGCAAGTTCCTTGGCGCATTCTGGACAGGCGGCTTGCTAAGAAGGGTAATTCTACTATCTCTCAAGTTTTGGTGCAGTGGTCTGAGTCCCCTCCAGAAGATGCCACTTGGGAAGACTATGAAGAATTGCATGCTCGATTTCCTGCTGCATTGGCTTGGGGGCAAGCCAATTCTCAAGGGGTGGGGCTTGTCAGGGACTCTCCACTGTCAACTGTTGAGGGTGGTGCCATTGGCGGGAAGGATCTGAATGCAGAAGAGGAGGAGGACGTCCAGACTTCTCAAAGCGACATCTCCACAGGCAATGGTCATCGGCCGGTTCGGGAGCGTAGGCCCAACCCAAGAGTGTTAGGCCCTGAATGGGTGGCGTAAGACA-CCAGCTCGCCTGTGAGCTGTCACGTGAGGGAGAGGGATGTATTAAATCAAACGATGAACACTTGTATGAACGATGAATTGGCAACTGGAGGCGTAGGCGGCGGCGGCTCGATCCTGTCGGATCTGAGAGGAAATACCACATAGTTGCCACAAAAAAGCATATATCTGAGTTGTTCTTGAGAGTCCCTAACAATCTGGTATCAGAGCCATTCGCGCTGCAAAATCCTCTTGGTTTAGCCGTAAAATTTCCGGGAGAGAGGTGGGATCCTGCCACCTTGGTGCGTNGTGATCCACAAAAGCTTCGGCTCCCTCAATCTGGTTGGCTGAATTC]

[+] EMBL AK063831             [GTCTGGAGATCTATCTGAGGTGCTTTGTTCATTCAGCTCCTAGCAAGTGGGCAGCTTGGTTACATCTTGCAGAATATTGGTATAATACCTCATATCACTCTGCTGTCCAGTCTACTCCCTTTGAAGTGCTCTATGGTCATTCCCCTTGTCATTTTGGCATCAGTTTACAAGATTGTGCCATTCCTGATTTACATGTTTGGTTAAAGGAAAGGCAGTTGATGCAGAAGCTTGTTCAACAGCATCTTCACAGAGCACAGCAGCAGATGAAGCATTTTGCTGATAAGAAAAGGAGTTTTCGTACTTTTGCTATTGGAGACTGGGTGTACCTCAAATTACAGCCCTATGTTCAAACTTCTGTGGCTGTCAGAGCTAATCACAAATTGGCTTTCAAATATTTTGGGCCATTTCAAATTACAGCACAGATTGGAACTGTTGCTTATAAATTGCAGTTACCTCCCACCAGTTCTATACACCCAGTTTTTCATGTGTCTCAATTGAAATCTGCTACTGGCTTTACAGGACATGTTCAGTCTCATCTGCCATCGTCTATCTCTGCCTTGCAAGTTCCTTGGCGCATTCTGGACAGGCGGCTTGCTAAGAAGGGTAATTCTACTATCTCTCAAGTTTTGGTGCAGTGGTCTGAGTCCCCTCCAGAAGATGCCACTTGGGAAGACTATGAAGAATTGCATGCTCGATTTCCTGCTGCATTGGCTTGGGGGCAAGCCAATTCTCAAGGGGTGGGGCTTGTCAGGGACTCTCCACTGTCAACTGTTGAGGGTGGTGCCATTGGCGGGAAGGATCTGAATGCAGAAGAGGAGGAGGACGTCCAGACTTCTCAAAGCGACATCTCCACAGGCAATGGTCATCGGCCGGTTCGGGAGCGTAGGCCCAACCCAAGAGTGTTAGGCCCTGAATGGGTGGCGTAAGACA CCAGCTCGCCTGTGAGCTGTCACGTGAGGGAGAGGGATGTATTAAATCAAACGATGAACACTTGTATGAACGATGAATTGGCAACTGGAGGCGTAGGCGGCGGCGGCTCGATCCTGTCGGATCTGAGAGGAAATACCACATAGTTGCCAC                                                                                                                                                                                    ]
[+] EMBL AU174277             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACTTGGGAAGACTATGAAGAATTGCATGCTCGATTTCCTGCTGCATTGGCTTGGGGGCAAGCCAATTCTCAAGGGGTGGGGCTTGTCAGGGACTCTCCACTGTCAACTGTTNAGGGTGGTGCCATTGGCGGGAAGGATCTGAATGCAGAAGAGGAGGAGGACGTCCAGACTTCTCAAAGCGACATCTCCACAGGCAATGGTCATCGGCCGGTTCGGGAGCGTAGGCCCAACCCAAGAGTGTTAGGCCCTGAATGGGTGGCGTAAGACACCCAGCTCGCCTGTGAGCTGTCACGTGAGGGAGAGGGATGTATTAAATCAAACGATGAACACTTGTATGAACGATGAATTGGCAACTGGAGGCGTAGGCGGCGGCGGCTCGATCCTGTCGGATCTGAGAGGAAATACCACATAGTTGCCACAAAAAA                                                                                                                                                                              ]
[+] EMBL CB684276             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCACTG CTTCTGTTGAGGGTGGTGCCATTGGCGGGAAGGATCTGAATGCAGAAGAGGAGGAGGACGTCCAGACTTCTCAAAGCGACATCTCCACAGGCAATGGTCATCGGCCGGTTCGGGAGCGTAGGCCCAACCCAAGAGTGTTAGGCCCTGAATGGGTGGCGTAAGACA CCAGCTCGCCTGTGAGCTGTCACGTGAGGGAGAGGGATGTATTAAATCAAACGATGAACACTTGTATGAACGATGAATTGGCAACTGGAGGCGTAGGCGGCGGCGGCTCGATCCTGTCGGATCTGAGAGGAAATACCACATAGTTGCC                                                                                                                                                                                      ]
[+] EMBL OSS3017A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCGGCGGCGGCTCGATCCTGTCGGATCTGAGAGGAAATACCACATAGTTGCCACAATTTCGCATATATCTGAGTTGTTCTTGAGAGTCCCTAACAATCTGGTATCAGAGCCATTCGCGCTGCAAAATCCTCTTGGTTTAGCCGTAAAATTTCCGGGAGAGAGGTGGGATCCTGCCACCTTGGTGCGTNGTGATCCACAAAAGCTTCGGCTCCCTCAATCTGGTTGGCTGAATTC]


>consensus_6801#0 GTCTGGAGATCTATCTGAGGTGCTTTGTTCATTCAGCTCCTAGCAAGTGGGCAGCTTGGT TACATCTTGCAGAATATTGGTATAATACCTCATATCACTCTGCTGTCCAGTCTACTCCCT TTGAAGTGCTCTATGGTCATTCCCCTTGTCATTTTGGCATCAGTTTACAAGATTGTGCCA TTCCTGATTTACATGTTTGGTTAAAGGAAAGGCAGTTGATGCAGAAGCTTGTTCAACAGC ATCTTCACAGAGCACAGCAGCAGATGAAGCATTTTGCTGATAAGAAAAGGAGTTTTCGTA CTTTTGCTATTGGAGACTGGGTGTACCTCAAATTACAGCCCTATGTTCAAACTTCTGTGG CTGTCAGAGCTAATCACAAATTGGCTTTCAAATATTTTGGGCCATTTCAAATTACAGCAC AGATTGGAACTGTTGCTTATAAATTGCAGTTACCTCCCACCAGTTCTATACACCCAGTTT TTCATGTGTCTCAATTGAAATCTGCTACTGGCTTTACAGGACATGTTCAGTCTCATCTGC CATCGTCTATCTCTGCCTTGCAAGTTCCTTGGCGCATTCTGGACAGGCGGCTTGCTAAGA AGGGTAATTCTACTATCTCTCAAGTTTTGGTGCAGTGGTCTGAGTCCCCTCCAGAAGATG CCACTTGGGAAGACTATGAAGAATTGCATGCTCGATTTCCTGCTGCATTGGCTTGGGGGC AAGCCAATTCTCAAGGGGTGGGGCTTGTCAGGGACTCTCCACTGTCAACTGTTGAGGGTG GTGCCATTGGCGGGAAGGATCTGAATGCAGAAGAGGAGGAGGACGTCCAGACTTCTCAAA GCGACATCTCCACAGGCAATGGTCATCGGCCGGTTCGGGAGCGTAGGCCCAACCCAAGAG TGTTAGGCCCTGAATGGGTGGCGTAAGACACCAGCTCGCCTGTGAGCTGTCACGTGAGGG AGAGGGATGTATTAAATCAAACGATGAACACTTGTATGAACGATGAATTGGCAACTGGAG GCGTAGGCGGCGGCGGCTCGATCCTGTCGGATCTGAGAGGAAATACCACATAGTTGCCAC AAAAAAGCATATATCTGAGTTGTTCTTGAGAGTCCCTAACAATCTGGTATCAGAGCCATT CGCGCTGCAAAATCCTCTTGGTTTAGCCGTAAAATTTCCGGGAGAGAGGTGGGATCCTGC CACCTTGGTGCGTNGTGATCCACAAAAGCTTCGGCTCCCTCAATCTGGTTGGCTGAATTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)