cluster # 6819

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Oryza sativa
cluster # 6819 cluster # 6819 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6819#0 length = 679 sequences # 4

consensusID : consensus_6819#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 679
fasta sequence

                              [GGGGNACACCAGAATGCACACAAGAAGAGAGGAGCTTCGGTTGGAACACCCACTTCTACTTCCCGGCCGCTTCGCCGCCGCCACGACGACGACGACGACGACGACGGCGA-TGCCCNTCCCTGACATGGTCGGCATGCCCCACCCACCAGATGTCCTCCCATGGCGTTGCACTCCTGCCGGCNTCACCAGGGC-TCCCATGTCACCGCCGCCGACATCGCCACCGCTGCTGCGCCGCCACATTACACCGTCGACCATGGCGTTGCCCGGCATCGCCAG-CGGCGNTGGTGACAGCTCCGGTGGGGTGGCGCCAAAGGCAAAGGGAGGCCGGCGGCGAGAAGCAGAGGCAGGTTGATCTCAACCTGAAGCTCTAGCTAGTAGCTTAAGTTGTTGCTCATCATGCTGATCTGTGCTGAGACGATGATCGAGGTAGGTGCTGTGCTTTTGGTTTGTTTCTTCAGAGATTCTTCTTTCTTTTCTTTCCTTTCTTTCCTTGGTTATTTCTTCTTCGTCGTCTTCCTTTGAGAGCTAGTGTGCGTAGTGCCACGCAAGTATTTTCTACTGGGGTGTACAATTAAGAATAAATCCGTGGCCATTGTAAATTAATTAATTATGCTGTTGCCTTGATCAAAAATGTTGCACTCTTTGCACAC-AATGCAAAAACCTTTGTTGTAAAAAAAAA]

[+] EMBL AU030182             [GGGGNACACCAGAATGCACACAAGAAGAGAGGAGCTTCGGTTGGAACACCCACTTCTACTTCCCGGCCGCTTCGCCGCCGCCACGACGACGACGACGACGACGACGGCGATTGCCCNTCCCTGACATGGTCGGCATGCCCCACCCACCAGATGTCCTCCCATGGCGTTGCACTCCTGCCGGCNTCACCAGGGC TCCCATGTCACCGCCGCCGACATCGCCACCGCTGCTGCGCCGCCACATTACACCGTCGACCATGGCGTTGCCCGGCATCGCCAGCCGGCGNTGGTGACAGCTCCGGTGGGGTGGCGCCAAAGGCAAAGGGAGNCCGGCGGCGAGAAGCAGAGGCAGGTTGATCTCAACCTGAAGCTCTAGCTAGTAGCTTAAGTTGTTGCTCATCATGCTGATCTGTGCTGAGACGATGATCGAGGTAGGTGCTGTGCTTTTGGTTTGTTTCTTCAGAGATTCTTCTTTCTTTTCTTTCCTTTCTTTCCTTGGTTATTTCTTCTTCGTCGTCTTCCTTTGAGAGCTAGTGTGCGTAGTGCCACGCAAGTATTTTCTACTGGGGTGTACAATTAAGAATAAATCCGTGGCCATTGTAAATTAATTAATTATGCTGTTGCCTTGATCAAAAA                                                 ]
[+] EMBL AU030492             [                                                                                CCACGACGACGACGACGACGACGAC GCGA TGCCCNTCCCTGACATGGTCGGCAT CCCCACCCACCAGATGTCC NCCATGGCGTTGCACTCCTGCCGGCNTCACCAGGGC TCCCATGTCACCGCCGCCGACATCGCCACCGCTTGTGCGCCGCCACATTACACCGTCGACCATGGCNTTG CCGGCATCGCCAG CGGCGNTGGTGACAGCT CGGTGGGGTGGCGCCAAAGGCAAAGGGAGGCCGGCGGCGAGAAGCAGAGGCAGGTTGATCTCAACCTGAAGCTCTAGCTAGTAGCTTAAGTTGTTGCTCATCATGCTGATCTGTGCTGAGACGATGATCGAGGTAGGTGCTGTGCTTTTGGTTTGTTTCTTCAGAGATTCTTCTTTCTTTTCTTTCCTTTCTTTCCTTGGTTATTTCTTCTTCGTCGTCTTCCTTTGAGAGCTAGTGTGCGTAGTGCCACGCAAGTATTTTCTACTGGGGTGTACAATTAAGAATAAATCCGTGGCCATTGTAAATTAATTAATTATGCTGTTGCCTTGATCAAAAA                                                 ]
[+] EMBL BI805071             [                                                                                      CGACGACGACGACGACGACGGCGA TG CCGT CCTGACATGGTCGGCATG CCCACCCACCAGATGTCCT CCATGGCGTTGCACTCCTGCCGGCCTCACCAGGGC TCCCATGTCACCGCCGCCGACATCGCCA CGCTGCTGCGCCGCCACATTACACCGTCGACCATGGCGTTG CCGGCATCGCCAG CGGCGGTGGTGACAGCT CGGTGGGGTGGCGCCAAAGGCAAAGGGAGGCCGGCGGCGAGAAGCAGAGGCAGGTTGATCTCAACCTGAAGCTCTAGCTAGTAGCTTAAGTTGTTGCTCATCATGCTGATCTGTGCTGAGACGATGATCGAGGTAGGTGCTGTGCTTTTGGTTTGTTTCTTCAGAGATTCTTCTTTCTTTTCTTTCCTTTCTTTCCTTGGTTATTTCTTCTTCGTCGTCTTCCTTTGAGAGCTAGTGTGCGTAGTGCCACGCAAGTATTTTCTACTGGGGTGTACAATTAAGAATAAATCCGTGGCCATTGTAAATTAATTAATTATGCTGTTGCCTTGATC AAAGTGTTGCACTCTTTGCACAC AATGCAAAAA                   ]
[+] EMBL AU030822             [                                                                                                                                                                                     CNTCACCAGGGCTTCCCATGTCACCGCCGCCGACATCGCCACGNCTGCTGCGCCGCCACATTACACCGTCGACCATGGCGTTGCCCGGCATCGCCAG CGGCGNTGGTGACAGCTCCGGTGGGGTGGCGCCAAAGGCAAAGGGAGGCCGGCGGCGAGAAGCAGAGGCAGGTTGATCTCAACCTGAAGCTCTAGCTAGTAGCTTAAGTTGTTGCTCATCATGCTGATCTGTGCTGAGACGATGATCGAGGTAGGTGCTGTGCTTTTGGTTTGTTTCTTCAGAGATTCTTCTTTCTTTTCTTTCCTTTCTTTCCTTGGTTATTTCTTCTTCGTCGTCTTCCTTTGAGAGCTAGTGTGCGTAGTGCCACGCAAGTATTTTCTACTGGGGTGTACAATTAAGAATAAATCCGTGGCCATTGTAAATTAATTAATTATGCTGTTGCCTTGATCAAAAGTGTTGCACTCTTTGCACACAAATGCATATGCCTTTGTTGTAAAAAAAAA]




>consensus_6819#0
GGGGNACACCAGAATGCACACAAGAAGAGAGGAGCTTCGGTTGGAACACCCACTTCTACT
TCCCGGCCGCTTCGCCGCCGCCACGACGACGACGACGACGACGACGGCGATGCCCNTCCC
TGACATGGTCGGCATGCCCCACCCACCAGATGTCCTCCCATGGCGTTGCACTCCTGCCGG
CNTCACCAGGGCTCCCATGTCACCGCCGCCGACATCGCCACCGCTGCTGCGCCGCCACAT
TACACCGTCGACCATGGCGTTGCCCGGCATCGCCAGCGGCGNTGGTGACAGCTCCGGTGG
GGTGGCGCCAAAGGCAAAGGGAGGCCGGCGGCGAGAAGCAGAGGCAGGTTGATCTCAACC
TGAAGCTCTAGCTAGTAGCTTAAGTTGTTGCTCATCATGCTGATCTGTGCTGAGACGATG
ATCGAGGTAGGTGCTGTGCTTTTGGTTTGTTTCTTCAGAGATTCTTCTTTCTTTTCTTTC
CTTTCTTTCCTTGGTTATTTCTTCTTCGTCGTCTTCCTTTGAGAGCTAGTGTGCGTAGTG
CCACGCAAGTATTTTCTACTGGGGTGTACAATTAAGAATAAATCCGTGGCCATTGTAAAT
TAATTAATTATGCTGTTGCCTTGATCAAAAATGTTGCACTCTTTGCACACAATGCAAAAA
CCTTTGTTGTAAAAAAAAA

clustalw multiple alignements is not computed in this case